Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 EIF4A1P12-201ENST00000551910 141 ntBASIC1.41□□□□□ -2.18
SSR1P43307 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.41□□□□□ -2.18
SSR1P43307 MTND3P12-201ENST00000559068 328 ntBASIC1.41□□□□□ -2.18
SSR1P43307 AC005668.1-201ENST00000571142 476 ntBASIC1.41□□□□□ -2.18
SSR1P43307 SNORA77B-201ENST00000578179 125 ntBASIC1.41□□□□□ -2.18
SSR1P43307 CTHRC1P1-201ENST00000605383 469 ntBASIC1.41□□□□□ -2.18
SSR1P43307 MIR3976-201ENST00000606807 139 ntBASIC1.41□□□□□ -2.18
SSR1P43307 AC064836.2-201ENST00000609491 462 ntBASIC1.41□□□□□ -2.18
SSR1P43307 U2.17-201ENST00000611454 95 ntBASIC1.41□□□□□ -2.18
SSR1P43307 RMST_6.1-201ENST00000611980 203 ntBASIC1.41□□□□□ -2.18
SSR1P43307 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.41□□□□□ -2.18
SSR1P43307 AC100821.1-201ENST00000523153 2479 ntBASIC1.41□□□□□ -2.18
SSR1P43307 ZNF72P-201ENST00000425869 1908 ntBASIC1.4□□□□□ -2.18
SSR1P43307 AC092268.1-201ENST00000342691 405 ntBASIC1.4□□□□□ -2.19
SSR1P43307 SNORA33-201ENST00000363664 130 ntBASIC1.4□□□□□ -2.19
SSR1P43307 RNU4-91P-201ENST00000364778 135 ntBASIC1.4□□□□□ -2.19
SSR1P43307 RNU6-996P-201ENST00000365438 107 ntBASIC1.4□□□□□ -2.19
SSR1P43307 MIR764-201ENST00000390811 85 ntBASIC1.4□□□□□ -2.19
SSR1P43307 RNU6-1158P-201ENST00000391167 107 ntBASIC1.4□□□□□ -2.19
SSR1P43307 AL663109.1-201ENST00000411498 844 ntBASIC1.4□□□□□ -2.19
SSR1P43307 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.4□□□□□ -2.19
SSR1P43307 MTCO1P44-201ENST00000441935 243 ntBASIC1.4□□□□□ -2.19
SSR1P43307 RNU7-63P-201ENST00000459054 62 ntBASIC1.4□□□□□ -2.19
SSR1P43307 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.4□□□□□ -2.19
SSR1P43307 AC008628.2-201ENST00000502605 298 ntBASIC1.4□□□□□ -2.19
SSR1P43307 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.4□□□□□ -2.19
SSR1P43307 Y_RNA.695-201ENST00000516715 107 ntBASIC1.4□□□□□ -2.19
SSR1P43307 SUMO2P18-201ENST00000518873 252 ntBASIC1.4□□□□□ -2.19
SSR1P43307 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.4□□□□□ -2.19
SSR1P43307 AC090115.3-201ENST00000553218 849 ntBASIC1.4□□□□□ -2.19
SSR1P43307 AL161670.1-201ENST00000554348 137 ntBASIC1.4□□□□□ -2.19
SSR1P43307 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.4□□□□□ -2.19
SSR1P43307 CYP4A27P-201ENST00000567218 190 ntBASIC1.4□□□□□ -2.19
SSR1P43307 AC119751.7-201ENST00000600494 245 ntBASIC1.4□□□□□ -2.19
SSR1P43307 uc_338.34-201ENST00000617467 174 ntBASIC1.4□□□□□ -2.19
SSR1P43307 AC072046.2-201ENST00000618366 268 ntBASIC1.4□□□□□ -2.19
SSR1P43307 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.4□□□□□ -2.19
SSR1P43307 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
SSR1P43307 AC009541.1-201ENST00000438279 2662 ntBASIC1.39□□□□□ -2.19
SSR1P43307 RNU6-1120P-201ENST00000362988 108 ntBASIC1.39□□□□□ -2.19
SSR1P43307 Y_RNA.399-201ENST00000383955 105 ntBASIC1.39□□□□□ -2.19
SSR1P43307 SNORA75-201ENST00000384158 137 ntBASIC1.39□□□□□ -2.19
SSR1P43307 RNU6-1026P-201ENST00000384465 108 ntBASIC1.39□□□□□ -2.19
SSR1P43307 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.39□□□□□ -2.19
SSR1P43307 USP9YP28-201ENST00000435142 589 ntBASIC1.39□□□□□ -2.19
SSR1P43307 AL135790.2-201ENST00000437701 267 ntBASIC1.39□□□□□ -2.19
SSR1P43307 AC016717.1-201ENST00000448918 286 ntBASIC1.39□□□□□ -2.19
SSR1P43307 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.39□□□□□ -2.19
SSR1P43307 AC087477.1-201ENST00000465747 340 ntBASIC1.39□□□□□ -2.19
SSR1P43307 GMFBP1-201ENST00000467831 427 ntBASIC1.39□□□□□ -2.19
SSR1P43307 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.39□□□□□ -2.19
SSR1P43307 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.39□□□□□ -2.19
SSR1P43307 AC025465.3-201ENST00000510570 311 ntBASIC1.39□□□□□ -2.19
SSR1P43307 AL118558.2-201ENST00000556294 238 ntBASIC1.39□□□□□ -2.19
SSR1P43307 AC009994.1-201ENST00000606889 253 ntBASIC1.39□□□□□ -2.19
SSR1P43307 AC126177.8-201ENST00000618339 1015 ntBASIC1.39□□□□□ -2.19
SSR1P43307 uc_338.11-201ENST00000619132 160 ntBASIC1.39□□□□□ -2.19
SSR1P43307 MIR7843-201ENST00000622274 79 ntBASIC1.39□□□□□ -2.19
SSR1P43307 SNORD31B-201ENST00000364977 69 ntBASIC1.38□□□□□ -2.19
SSR1P43307 RNU6-517P-201ENST00000384362 110 ntBASIC1.38□□□□□ -2.19
SSR1P43307 MIR758-201ENST00000390227 88 ntBASIC1.38□□□□□ -2.19
SSR1P43307 MIR1267-201ENST00000408723 78 ntBASIC1.38□□□□□ -2.19
SSR1P43307 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.38□□□□□ -2.19
SSR1P43307 MRPL35P3-201ENST00000421557 364 ntBASIC1.38□□□□□ -2.19
SSR1P43307 AC060773.1-201ENST00000421698 310 ntBASIC1.38□□□□□ -2.19
SSR1P43307 AC012306.1-201ENST00000423267 114 ntBASIC1.38□□□□□ -2.19
SSR1P43307 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.38□□□□□ -2.19
SSR1P43307 ATP5J2P3-201ENST00000451550 258 ntBASIC1.38□□□□□ -2.19
SSR1P43307 AC016925.1-201ENST00000458303 298 ntBASIC1.38□□□□□ -2.19
SSR1P43307 RNU1-123P-201ENST00000458950 160 ntBASIC1.38□□□□□ -2.19
SSR1P43307 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.38□□□□□ -2.19
SSR1P43307 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.38□□□□□ -2.19
SSR1P43307 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.38□□□□□ -2.19
SSR1P43307 MTCO2P4-201ENST00000517968 247 ntBASIC1.38□□□□□ -2.19
SSR1P43307 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.38□□□□□ -2.19
SSR1P43307 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.38□□□□□ -2.19
SSR1P43307 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.38□□□□□ -2.19
SSR1P43307 MRPS36P4-201ENST00000534436 298 ntBASIC1.38□□□□□ -2.19
SSR1P43307 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.38□□□□□ -2.19
SSR1P43307 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.38□□□□□ -2.19
SSR1P43307 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.38□□□□□ -2.19
SSR1P43307 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.38□□□□□ -2.19
SSR1P43307 VN1R107P-201ENST00000601784 209 ntBASIC1.38□□□□□ -2.19
SSR1P43307 AL355802.3-201ENST00000607571 545 ntBASIC1.38□□□□□ -2.19
SSR1P43307 RMST_3.1-201ENST00000611651 109 ntBASIC1.38□□□□□ -2.19
SSR1P43307 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
SSR1P43307 AL121890.5-201ENST00000620848 304 ntBASIC1.38□□□□□ -2.19
SSR1P43307 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.38□□□□□ -2.19
SSR1P43307 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SSR1P43307 RNU6-414P-201ENST00000363705 104 ntBASIC1.37□□□□□ -2.19
SSR1P43307 SNORA4.2-201ENST00000365313 147 ntBASIC1.37□□□□□ -2.19
SSR1P43307 Y_RNA.359-201ENST00000365498 102 ntBASIC1.37□□□□□ -2.19
SSR1P43307 MIR487A-201ENST00000385009 80 ntBASIC1.37□□□□□ -2.19
SSR1P43307 RNU2-7P-201ENST00000410794 178 ntBASIC1.37□□□□□ -2.19
SSR1P43307 AP000275.1-201ENST00000411943 390 ntBASIC1.37□□□□□ -2.19
SSR1P43307 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.37□□□□□ -2.19
SSR1P43307 RPL37P10-201ENST00000412884 288 ntBASIC1.37□□□□□ -2.19
SSR1P43307 MTCO2P19-201ENST00000427513 598 ntBASIC1.37□□□□□ -2.19
SSR1P43307 AL606489.2-201ENST00000433886 234 ntBASIC1.37□□□□□ -2.19
SSR1P43307 AL356010.1-201ENST00000456364 102 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms