Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 Y_RNA.498-201ENST00000384460 102 ntBASIC3.4□□□□□ -1.87
LTBRP36941 RNA5SP201-201ENST00000410316 124 ntBASIC3.4□□□□□ -1.87
LTBRP36941 HMGN2P20-201ENST00000437531 273 ntBASIC3.4□□□□□ -1.87
LTBRP36941 AL136097.1-201ENST00000456945 913 ntBASIC3.4□□□□□ -1.87
LTBRP36941 AL121594.1-201ENST00000475906 575 ntBASIC3.4□□□□□ -1.87
LTBRP36941 RPL23AP70-201ENST00000483361 460 ntBASIC3.4□□□□□ -1.87
LTBRP36941 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.4□□□□□ -1.87
LTBRP36941 AC091826.1-201ENST00000514065 313 ntBASIC3.4□□□□□ -1.87
LTBRP36941 Y_RNA.700-201ENST00000516806 100 ntBASIC3.4□□□□□ -1.87
LTBRP36941 RNU6-182P-201ENST00000516970 105 ntBASIC3.4□□□□□ -1.87
LTBRP36941 AC055872.1-201ENST00000570978 278 ntBASIC3.4□□□□□ -1.87
LTBRP36941 MIR4643-201ENST00000577473 78 ntBASIC3.4□□□□□ -1.87
LTBRP36941 MIR4644-201ENST00000579929 84 ntBASIC3.4□□□□□ -1.87
LTBRP36941 MIR2682-201ENST00000580305 110 ntBASIC3.4□□□□□ -1.87
LTBRP36941 AC098479.1-201ENST00000609225 154 ntBASIC3.4□□□□□ -1.87
LTBRP36941 uc_338.14-201ENST00000613162 166 ntBASIC3.4□□□□□ -1.87
LTBRP36941 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.4□□□□□ -1.87
LTBRP36941 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LTBRP36941 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LTBRP36941 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LTBRP36941 SNORA25.1-201ENST00000362326 128 ntBASIC3.39□□□□□ -1.87
LTBRP36941 RNU1-62P-201ENST00000362599 164 ntBASIC3.39□□□□□ -1.87
LTBRP36941 Y_RNA.117-201ENST00000363294 101 ntBASIC3.39□□□□□ -1.87
LTBRP36941 Y_RNA.200-201ENST00000364018 102 ntBASIC3.39□□□□□ -1.87
LTBRP36941 Y_RNA.274-201ENST00000364714 101 ntBASIC3.39□□□□□ -1.87
LTBRP36941 Y_RNA.297-201ENST00000364950 91 ntBASIC3.39□□□□□ -1.87
LTBRP36941 SNORA18.3-201ENST00000384122 132 ntBASIC3.39□□□□□ -1.87
LTBRP36941 RNU6-514P-201ENST00000384208 107 ntBASIC3.39□□□□□ -1.87
LTBRP36941 SNORA54-201ENST00000384281 123 ntBASIC3.39□□□□□ -1.87
LTBRP36941 Y_RNA.785-201ENST00000384290 109 ntBASIC3.39□□□□□ -1.87
LTBRP36941 RNU1-57P-201ENST00000384491 166 ntBASIC3.39□□□□□ -1.87
LTBRP36941 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
LTBRP36941 RNA5SP354-201ENST00000391247 136 ntBASIC3.39□□□□□ -1.87
LTBRP36941 RPL23AP36-201ENST00000413895 458 ntBASIC3.39□□□□□ -1.87
LTBRP36941 IFNA11P-201ENST00000446352 526 ntBASIC3.39□□□□□ -1.87
LTBRP36941 RPL23AP3-201ENST00000453844 468 ntBASIC3.39□□□□□ -1.87
LTBRP36941 AC145146.1-201ENST00000496370 254 ntBASIC3.39□□□□□ -1.87
LTBRP36941 SNORA81.3-201ENST00000517283 198 ntBASIC3.39□□□□□ -1.87
LTBRP36941 AC079598.5-201ENST00000547460 117 ntBASIC3.39□□□□□ -1.87
LTBRP36941 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.39□□□□□ -1.87
LTBRP36941 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.39□□□□□ -1.87
LTBRP36941 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.39□□□□□ -1.87
LTBRP36941 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.39□□□□□ -1.87
LTBRP36941 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.39□□□□□ -1.87
LTBRP36941 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
LTBRP36941 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
LTBRP36941 AL109809.4-201ENST00000603520 2185 ntBASIC3.38□□□□□ -1.87
LTBRP36941 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
LTBRP36941 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.38□□□□□ -1.87
LTBRP36941 SNORA14A-201ENST00000364773 135 ntBASIC3.38□□□□□ -1.87
LTBRP36941 RNU4-70P-201ENST00000384579 139 ntBASIC3.38□□□□□ -1.87
LTBRP36941 AL139156.1-201ENST00000412785 841 ntBASIC3.38□□□□□ -1.87
LTBRP36941 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.38□□□□□ -1.87
LTBRP36941 PIGPP3-201ENST00000425307 415 ntBASIC3.38□□□□□ -1.87
LTBRP36941 POLR2KP2-201ENST00000438155 177 ntBASIC3.38□□□□□ -1.87
LTBRP36941 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.38□□□□□ -1.87
LTBRP36941 RPS27P26-201ENST00000494583 239 ntBASIC3.38□□□□□ -1.87
LTBRP36941 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.38□□□□□ -1.87
LTBRP36941 EIF4A1P12-201ENST00000551910 141 ntBASIC3.38□□□□□ -1.87
LTBRP36941 AL360157.1-201ENST00000565962 87 ntBASIC3.38□□□□□ -1.87
LTBRP36941 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.38□□□□□ -1.87
LTBRP36941 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.38□□□□□ -1.87
LTBRP36941 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
LTBRP36941 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
LTBRP36941 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
LTBRP36941 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LTBRP36941 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
LTBRP36941 AC091152.2-201ENST00000591628 2569 ntBASIC3.38□□□□□ -1.87
LTBRP36941 GABRG2-229ENST00000641017 3628 ntBASIC3.38□□□□□ -1.87
LTBRP36941 AC018555.1-201ENST00000567548 1980 ntBASIC3.38□□□□□ -1.87
LTBRP36941 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
LTBRP36941 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LTBRP36941 AC006504.1-201ENST00000562493 3666 ntBASIC3.37□□□□□ -1.87
LTBRP36941 Y_RNA.29-201ENST00000362570 113 ntBASIC3.37□□□□□ -1.87
LTBRP36941 U3.9-201ENST00000363823 204 ntBASIC3.37□□□□□ -1.87
LTBRP36941 Y_RNA.446-201ENST00000384178 104 ntBASIC3.37□□□□□ -1.87
LTBRP36941 MIR1298-201ENST00000408783 112 ntBASIC3.37□□□□□ -1.87
LTBRP36941 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.37□□□□□ -1.87
LTBRP36941 AC006989.1-201ENST00000427212 131 ntBASIC3.37□□□□□ -1.87
LTBRP36941 RAB28P5-201ENST00000427490 651 ntBASIC3.37□□□□□ -1.87
LTBRP36941 AC027124.2-201ENST00000428249 105 ntBASIC3.37□□□□□ -1.87
LTBRP36941 Z98742.2-201ENST00000431564 187 ntBASIC3.37□□□□□ -1.87
LTBRP36941 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.37□□□□□ -1.87
LTBRP36941 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.37□□□□□ -1.87
LTBRP36941 RPS3P1-201ENST00000456781 192 ntBASIC3.37□□□□□ -1.87
LTBRP36941 RNU7-170P-201ENST00000459303 61 ntBASIC3.37□□□□□ -1.87
LTBRP36941 AC027176.1-201ENST00000560204 514 ntBASIC3.37□□□□□ -1.87
LTBRP36941 AC026470.2-201ENST00000561492 181 ntBASIC3.37□□□□□ -1.87
LTBRP36941 AC022441.3-201ENST00000605737 136 ntBASIC3.37□□□□□ -1.87
LTBRP36941 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
LTBRP36941 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LTBRP36941 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.37□□□□□ -1.87
LTBRP36941 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LTBRP36941 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
LTBRP36941 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LTBRP36941 MIR410-201ENST00000362222 80 ntBASIC3.36□□□□□ -1.87
LTBRP36941 snoU2_19.1-201ENST00000362361 80 ntBASIC3.36□□□□□ -1.87
LTBRP36941 RNU6-740P-201ENST00000364734 105 ntBASIC3.36□□□□□ -1.87
LTBRP36941 Y_RNA.383-201ENST00000383855 97 ntBASIC3.36□□□□□ -1.87
LTBRP36941 RN7SKP220-201ENST00000410611 288 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms