Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.02□□□□□ -2.41
CKS2P33552 MTND1P32-201ENST00000433043 938 ntBASIC0.02□□□□□ -2.41
CKS2P33552 RPL23AP50-201ENST00000434149 455 ntBASIC0.02□□□□□ -2.41
CKS2P33552 AC022364.2-201ENST00000457963 554 ntBASIC0.02□□□□□ -2.41
CKS2P33552 snoU13.25-201ENST00000458945 104 ntBASIC0.02□□□□□ -2.41
CKS2P33552 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.02□□□□□ -2.41
CKS2P33552 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.02□□□□□ -2.41
CKS2P33552 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.02□□□□□ -2.41
CKS2P33552 AC105313.1-201ENST00000509121 353 ntBASIC0.02□□□□□ -2.41
CKS2P33552 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.02□□□□□ -2.41
CKS2P33552 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.02□□□□□ -2.41
CKS2P33552 AP002001.1-203ENST00000534002 267 ntBASIC0.02□□□□□ -2.41
CKS2P33552 AC090517.1-201ENST00000569307 266 ntBASIC0.02□□□□□ -2.41
CKS2P33552 MTND3P13-201ENST00000574391 343 ntBASIC0.02□□□□□ -2.41
CKS2P33552 MIR4498-201ENST00000577599 66 ntBASIC0.02□□□□□ -2.41
CKS2P33552 AL357312.1-201ENST00000603879 298 ntBASIC0.02□□□□□ -2.41
CKS2P33552 AC009994.1-201ENST00000606889 253 ntBASIC0.02□□□□□ -2.41
CKS2P33552 AC100812.1-201ENST00000607622 580 ntBASIC0.02□□□□□ -2.41
CKS2P33552 AC012409.4-201ENST00000612923 249 ntBASIC0.02□□□□□ -2.41
CKS2P33552 MIR6513-201ENST00000621188 64 ntBASIC0.02□□□□□ -2.41
CKS2P33552 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
CKS2P33552 RNU6-199P-201ENST00000362954 107 ntBASIC0.01□□□□□ -2.41
CKS2P33552 SNORD32A-201ENST00000364805 84 ntBASIC0.01□□□□□ -2.41
CKS2P33552 RNU6-1067P-201ENST00000384752 107 ntBASIC0.01□□□□□ -2.41
CKS2P33552 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.01□□□□□ -2.41
CKS2P33552 AC078809.1-201ENST00000427601 140 ntBASIC0.01□□□□□ -2.41
CKS2P33552 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.01□□□□□ -2.41
CKS2P33552 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.01□□□□□ -2.41
CKS2P33552 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.01□□□□□ -2.41
CKS2P33552 AC079395.1-201ENST00000510981 262 ntBASIC0.01□□□□□ -2.41
CKS2P33552 RNU6-123P-201ENST00000516163 102 ntBASIC0.01□□□□□ -2.41
CKS2P33552 RNU6-1110P-201ENST00000516462 101 ntBASIC0.01□□□□□ -2.41
CKS2P33552 ADI1P3-201ENST00000549509 470 ntBASIC0.01□□□□□ -2.41
CKS2P33552 MIR4778-201ENST00000577635 80 ntBASIC0.01□□□□□ -2.41
CKS2P33552 AC131055.1-201ENST00000584626 316 ntBASIC0.01□□□□□ -2.41
CKS2P33552 AL391903.3-201ENST00000612158 163 ntBASIC0.01□□□□□ -2.41
CKS2P33552 AL138726.1-201ENST00000614873 333 ntBASIC0.01□□□□□ -2.41
CKS2P33552 AC068880.4-201ENST00000623082 495 ntBASIC0.01□□□□□ -2.41
CKS2P33552 Z69720.2-201ENST00000624755 279 ntBASIC0.01□□□□□ -2.41
CKS2P33552 AL450472.1-202ENST00000637286 180 ntBASIC0.01□□□□□ -2.41
CKS2P33552 U6.108-201ENST00000637764 58 ntBASIC0.01□□□□□ -2.41
CKS2P33552 MIR140-201ENST00000385282 100 ntBASIC0□□□□□ -2.41
CKS2P33552 MIR1283-1-201ENST00000408494 87 ntBASIC0□□□□□ -2.41
CKS2P33552 RNU6-293P-201ENST00000411259 106 ntBASIC0□□□□□ -2.41
CKS2P33552 CALM2P2-201ENST00000428512 440 ntBASIC0□□□□□ -2.41
CKS2P33552 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0□□□□□ -2.41
CKS2P33552 AL445523.1-201ENST00000451184 1362 ntBASIC0□□□□□ -2.41
CKS2P33552 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0□□□□□ -2.41
CKS2P33552 MTND4LP26-201ENST00000518144 282 ntBASIC0□□□□□ -2.41
CKS2P33552 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0□□□□□ -2.41
CKS2P33552 LRRC6P1-201ENST00000532188 885 ntBASIC0□□□□□ -2.41
CKS2P33552 SUB1P2-201ENST00000556401 297 ntBASIC0□□□□□ -2.41
CKS2P33552 MIR5697-201ENST00000578045 78 ntBASIC0□□□□□ -2.41
CKS2P33552 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0□□□□□ -2.41
CKS2P33552 AC005776.1-201ENST00000603164 290 ntBASIC0□□□□□ -2.41
CKS2P33552 AC073349.3-201ENST00000617616 186 ntBASIC0□□□□□ -2.41
CKS2P33552 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC-0□□□□□ -2.41
CKS2P33552 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.01□□□□□ -2.41
CKS2P33552 MIR103A1-201ENST00000362165 78 ntBASIC-0.01□□□□□ -2.41
CKS2P33552 SNORD114-22-201ENST00000365423 72 ntBASIC-0.01□□□□□ -2.41
CKS2P33552 RNU4-45P-201ENST00000365469 141 ntBASIC-0.01□□□□□ -2.41
CKS2P33552 RNA5SP323-201ENST00000391094 133 ntBASIC-0.01□□□□□ -2.41
CKS2P33552 MIR300-201ENST00000401138 83 ntBASIC-0.01□□□□□ -2.41
CKS2P33552 MIR548J-201ENST00000408833 112 ntBASIC-0.01□□□□□ -2.41
CKS2P33552 RNU2-3P-201ENST00000410144 191 ntBASIC-0.01□□□□□ -2.41
CKS2P33552 AC006366.1-201ENST00000422002 759 ntBASIC-0.01□□□□□ -2.41
CKS2P33552 ISCA1P6-201ENST00000427740 390 ntBASIC-0.01□□□□□ -2.41
CKS2P33552 AC016717.1-201ENST00000448918 286 ntBASIC-0.01□□□□□ -2.41
CKS2P33552 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.01□□□□□ -2.41
CKS2P33552 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.01□□□□□ -2.41
CKS2P33552 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.01□□□□□ -2.41
CKS2P33552 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.01□□□□□ -2.41
CKS2P33552 DEFB131C-201ENST00000528817 165 ntBASIC-0.01□□□□□ -2.41
CKS2P33552 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC-0.01□□□□□ -2.41
CKS2P33552 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC-0.01□□□□□ -2.41
CKS2P33552 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.01□□□□□ -2.41
CKS2P33552 MIR4711-201ENST00000578274 70 ntBASIC-0.01□□□□□ -2.41
CKS2P33552 LARP7P1-201ENST00000605576 316 ntBASIC-0.01□□□□□ -2.41
CKS2P33552 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC-0.01□□□□□ -2.41
CKS2P33552 AC104458.1-201ENST00000608243 463 ntBASIC-0.01□□□□□ -2.41
CKS2P33552 AL096861.1-201ENST00000610899 123 ntBASIC-0.01□□□□□ -2.41
CKS2P33552 AC005520.5-201ENST00000613926 164 ntBASIC-0.01□□□□□ -2.41
CKS2P33552 AP000484.1-201ENST00000620067 1252 ntBASIC-0.01□□□□□ -2.41
CKS2P33552 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.02□□□□□ -2.41
CKS2P33552 Y_RNA.46-201ENST00000362695 102 ntBASIC-0.02□□□□□ -2.41
CKS2P33552 U3.4-201ENST00000363352 213 ntBASIC-0.02□□□□□ -2.41
CKS2P33552 RNU6-440P-201ENST00000390882 105 ntBASIC-0.02□□□□□ -2.41
CKS2P33552 RNU6-298P-201ENST00000390888 96 ntBASIC-0.02□□□□□ -2.41
CKS2P33552 RNU6-177P-201ENST00000411257 104 ntBASIC-0.02□□□□□ -2.41
CKS2P33552 AC000111.3-201ENST00000433478 193 ntBASIC-0.02□□□□□ -2.41
CKS2P33552 AL162725.1-201ENST00000435405 301 ntBASIC-0.02□□□□□ -2.41
CKS2P33552 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.02□□□□□ -2.41
CKS2P33552 AC025465.4-201ENST00000513422 638 ntBASIC-0.02□□□□□ -2.41
CKS2P33552 AC112206.4-201ENST00000515142 405 ntBASIC-0.02□□□□□ -2.41
CKS2P33552 AC109810.1-201ENST00000534066 224 ntBASIC-0.02□□□□□ -2.41
CKS2P33552 AP002360.4-201ENST00000606980 481 ntBASIC-0.02□□□□□ -2.41
CKS2P33552 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.02□□□□□ -2.41
CKS2P33552 AC004832.4-201ENST00000608952 331 ntBASIC-0.02□□□□□ -2.41
CKS2P33552 MIR6788-201ENST00000618842 66 ntBASIC-0.02□□□□□ -2.41
CKS2P33552 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms