Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RPS27P26-201ENST00000494583 239 ntBASIC3.03□□□□□ -1.92
SLC6A4P31645 HMGB1P35-201ENST00000503360 598 ntBASIC3.03□□□□□ -1.92
SLC6A4P31645 RNY3P15-201ENST00000516297 97 ntBASIC3.03□□□□□ -1.92
SLC6A4P31645 RNU6-58P-201ENST00000517143 103 ntBASIC3.03□□□□□ -1.92
SLC6A4P31645 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.03□□□□□ -1.92
SLC6A4P31645 AC079598.5-201ENST00000547460 117 ntBASIC3.03□□□□□ -1.92
SLC6A4P31645 MIR3923-201ENST00000579521 83 ntBASIC3.03□□□□□ -1.92
SLC6A4P31645 MIR4672-201ENST00000583126 81 ntBASIC3.03□□□□□ -1.92
SLC6A4P31645 AC073410.2-201ENST00000603240 332 ntBASIC3.03□□□□□ -1.92
SLC6A4P31645 AL133393.1-201ENST00000603277 287 ntBASIC3.03□□□□□ -1.92
SLC6A4P31645 AC005520.5-201ENST00000613926 164 ntBASIC3.03□□□□□ -1.92
SLC6A4P31645 U6.92-201ENST00000636464 89 ntBASIC3.03□□□□□ -1.92
SLC6A4P31645 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SLC6A4P31645 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.03□□□□□ -1.92
SLC6A4P31645 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.03□□□□□ -1.92
SLC6A4P31645 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.93
SLC6A4P31645 AL109809.4-201ENST00000603520 2185 ntBASIC3.02□□□□□ -1.93
SLC6A4P31645 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.02□□□□□ -1.93
SLC6A4P31645 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SLC6A4P31645 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SLC6A4P31645 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SLC6A4P31645 RNU6-529P-201ENST00000363383 104 ntBASIC3.02□□□□□ -1.93
SLC6A4P31645 CD24P4-201ENST00000382840 243 ntBASIC3.02□□□□□ -1.93
SLC6A4P31645 RNU6-1027P-201ENST00000383998 107 ntBASIC3.02□□□□□ -1.93
SLC6A4P31645 RNU6-708P-201ENST00000384217 107 ntBASIC3.02□□□□□ -1.93
SLC6A4P31645 RNA5SP213-201ENST00000391031 106 ntBASIC3.02□□□□□ -1.93
SLC6A4P31645 MIR320B2-201ENST00000408479 138 ntBASIC3.02□□□□□ -1.93
SLC6A4P31645 RNA5SP274-201ENST00000410484 108 ntBASIC3.02□□□□□ -1.93
SLC6A4P31645 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.02□□□□□ -1.93
SLC6A4P31645 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.02□□□□□ -1.93
SLC6A4P31645 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.02□□□□□ -1.93
SLC6A4P31645 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.02□□□□□ -1.93
SLC6A4P31645 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.02□□□□□ -1.93
SLC6A4P31645 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.02□□□□□ -1.93
SLC6A4P31645 U8.22-201ENST00000459141 133 ntBASIC3.02□□□□□ -1.93
SLC6A4P31645 AP001324.2-201ENST00000461163 319 ntBASIC3.02□□□□□ -1.93
SLC6A4P31645 SCGB1D5P-201ENST00000515134 247 ntBASIC3.02□□□□□ -1.93
SLC6A4P31645 RNU5F-2P-201ENST00000516066 82 ntBASIC3.02□□□□□ -1.93
SLC6A4P31645 RNU6-1012P-201ENST00000516606 109 ntBASIC3.02□□□□□ -1.93
SLC6A4P31645 AC093023.1-201ENST00000547375 507 ntBASIC3.02□□□□□ -1.93
SLC6A4P31645 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.02□□□□□ -1.93
SLC6A4P31645 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.02□□□□□ -1.93
SLC6A4P31645 AL034555.1-201ENST00000604816 211 ntBASIC3.02□□□□□ -1.93
SLC6A4P31645 AC107871.2-201ENST00000612894 502 ntBASIC3.02□□□□□ -1.93
SLC6A4P31645 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.02□□□□□ -1.93
SLC6A4P31645 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.02□□□□□ -1.93
SLC6A4P31645 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.02□□□□□ -1.93
SLC6A4P31645 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.02□□□□□ -1.93
SLC6A4P31645 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SLC6A4P31645 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.02□□□□□ -1.93
SLC6A4P31645 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SLC6A4P31645 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.01□□□□□ -1.93
SLC6A4P31645 Y_RNA.19-201ENST00000362462 99 ntBASIC3.01□□□□□ -1.93
SLC6A4P31645 RNU6-879P-201ENST00000364328 108 ntBASIC3.01□□□□□ -1.93
SLC6A4P31645 SNORA18.3-201ENST00000384122 132 ntBASIC3.01□□□□□ -1.93
SLC6A4P31645 RNU1-57P-201ENST00000384491 166 ntBASIC3.01□□□□□ -1.93
SLC6A4P31645 MRPL35P1-201ENST00000404272 572 ntBASIC3.01□□□□□ -1.93
SLC6A4P31645 AL133475.1-201ENST00000404414 305 ntBASIC3.01□□□□□ -1.93
SLC6A4P31645 AL031121.1-201ENST00000406553 254 ntBASIC3.01□□□□□ -1.93
SLC6A4P31645 MIR1302-6-201ENST00000408466 90 ntBASIC3.01□□□□□ -1.93
SLC6A4P31645 RNU6-1140P-201ENST00000410517 106 ntBASIC3.01□□□□□ -1.93
SLC6A4P31645 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.01□□□□□ -1.93
SLC6A4P31645 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.01□□□□□ -1.93
SLC6A4P31645 AL135938.1-201ENST00000443141 297 ntBASIC3.01□□□□□ -1.93
SLC6A4P31645 AC007215.1-201ENST00000464893 276 ntBASIC3.01□□□□□ -1.93
SLC6A4P31645 RPL36AP48-201ENST00000485521 314 ntBASIC3.01□□□□□ -1.93
SLC6A4P31645 RN7SL633P-201ENST00000488974 297 ntBASIC3.01□□□□□ -1.93
SLC6A4P31645 AC010469.2-201ENST00000496412 480 ntBASIC3.01□□□□□ -1.93
SLC6A4P31645 RNU6-397P-201ENST00000516226 104 ntBASIC3.01□□□□□ -1.93
SLC6A4P31645 Y_RNA.668-201ENST00000516233 93 ntBASIC3.01□□□□□ -1.93
SLC6A4P31645 SNORA31.16-201ENST00000516773 139 ntBASIC3.01□□□□□ -1.93
SLC6A4P31645 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.01□□□□□ -1.93
SLC6A4P31645 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.01□□□□□ -1.93
SLC6A4P31645 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.01□□□□□ -1.93
SLC6A4P31645 AL078605.1-201ENST00000603529 500 ntBASIC3.01□□□□□ -1.93
SLC6A4P31645 AC005296.1-201ENST00000616145 209 ntBASIC3.01□□□□□ -1.93
SLC6A4P31645 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SLC6A4P31645 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SLC6A4P31645 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
SLC6A4P31645 AL359854.1-201ENST00000614203 1594 ntBASIC3□□□□□ -1.93
SLC6A4P31645 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SLC6A4P31645 RNU6-655P-201ENST00000362858 107 ntBASIC3□□□□□ -1.93
SLC6A4P31645 RNU6-1210P-201ENST00000363775 107 ntBASIC3□□□□□ -1.93
SLC6A4P31645 Y_RNA.288-201ENST00000364854 92 ntBASIC3□□□□□ -1.93
SLC6A4P31645 RNU6-1083P-201ENST00000384022 107 ntBASIC3□□□□□ -1.93
SLC6A4P31645 MIR186-201ENST00000384988 86 ntBASIC3□□□□□ -1.93
SLC6A4P31645 MIR10B-201ENST00000385011 110 ntBASIC3□□□□□ -1.93
SLC6A4P31645 AL139281.1-201ENST00000422120 335 ntBASIC3□□□□□ -1.93
SLC6A4P31645 AC009969.1-201ENST00000438726 172 ntBASIC3□□□□□ -1.93
SLC6A4P31645 RN7SL283P-201ENST00000489055 303 ntBASIC3□□□□□ -1.93
SLC6A4P31645 AC083906.5-201ENST00000503722 328 ntBASIC3□□□□□ -1.93
SLC6A4P31645 AC025465.3-201ENST00000510570 311 ntBASIC3□□□□□ -1.93
SLC6A4P31645 RN7SKP49-201ENST00000516675 260 ntBASIC3□□□□□ -1.93
SLC6A4P31645 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3□□□□□ -1.93
SLC6A4P31645 AC125232.2-201ENST00000592457 143 ntBASIC3□□□□□ -1.93
SLC6A4P31645 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3□□□□□ -1.93
SLC6A4P31645 AC110079.1-202ENST00000635213 138 ntBASIC3□□□□□ -1.93
SLC6A4P31645 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
SLC6A4P31645 AP003122.5-201ENST00000527668 3766 ntBASIC3□□□□□ -1.93
SLC6A4P31645 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms