Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 RSL24D1P8-201ENST00000434442 492 ntBASIC0.08□□□□□ -2.4
SDC4P31431 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.08□□□□□ -2.4
SDC4P31431 AC016700.2-201ENST00000446011 156 ntBASIC0.08□□□□□ -2.4
SDC4P31431 AL360271.2-201ENST00000447710 161 ntBASIC0.08□□□□□ -2.4
SDC4P31431 AC022364.2-201ENST00000457963 554 ntBASIC0.08□□□□□ -2.4
SDC4P31431 AC015911.1-201ENST00000495111 156 ntBASIC0.08□□□□□ -2.4
SDC4P31431 RNU2-34P-201ENST00000516534 121 ntBASIC0.08□□□□□ -2.4
SDC4P31431 AC087854.1-201ENST00000519706 414 ntBASIC0.08□□□□□ -2.4
SDC4P31431 AC024995.1-201ENST00000523014 93 ntBASIC0.08□□□□□ -2.4
SDC4P31431 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.08□□□□□ -2.4
SDC4P31431 MIR548AC-201ENST00000585049 88 ntBASIC0.08□□□□□ -2.4
SDC4P31431 Z98751.3-201ENST00000604447 521 ntBASIC0.08□□□□□ -2.4
SDC4P31431 PRELID3BP2-201ENST00000605362 201 ntBASIC0.08□□□□□ -2.4
SDC4P31431 AC026585.1-201ENST00000619582 524 ntBASIC0.08□□□□□ -2.4
SDC4P31431 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
SDC4P31431 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
SDC4P31431 MIR103A1-201ENST00000362165 78 ntBASIC0.07□□□□□ -2.4
SDC4P31431 RNU1-76P-201ENST00000362903 159 ntBASIC0.07□□□□□ -2.4
SDC4P31431 RNU6-527P-201ENST00000363425 104 ntBASIC0.07□□□□□ -2.4
SDC4P31431 RNU4-56P-201ENST00000364700 142 ntBASIC0.07□□□□□ -2.4
SDC4P31431 SNORA36.2-201ENST00000384004 127 ntBASIC0.07□□□□□ -2.4
SDC4P31431 RNU6-378P-201ENST00000384324 107 ntBASIC0.07□□□□□ -2.4
SDC4P31431 RNU6-1026P-201ENST00000384465 108 ntBASIC0.07□□□□□ -2.4
SDC4P31431 MIR653-201ENST00000385279 96 ntBASIC0.07□□□□□ -2.4
SDC4P31431 SNORA40.2-201ENST00000390847 128 ntBASIC0.07□□□□□ -2.4
SDC4P31431 RNA5SP467-201ENST00000391274 118 ntBASIC0.07□□□□□ -2.4
SDC4P31431 RNA5SP222-201ENST00000411039 105 ntBASIC0.07□□□□□ -2.4
SDC4P31431 ELOCP17-201ENST00000414751 326 ntBASIC0.07□□□□□ -2.4
SDC4P31431 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.07□□□□□ -2.4
SDC4P31431 AC243964.1-201ENST00000441814 261 ntBASIC0.07□□□□□ -2.4
SDC4P31431 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.07□□□□□ -2.4
SDC4P31431 RPL39P39-201ENST00000455840 151 ntBASIC0.07□□□□□ -2.4
SDC4P31431 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.07□□□□□ -2.4
SDC4P31431 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.07□□□□□ -2.4
SDC4P31431 AK3P2-201ENST00000507976 429 ntBASIC0.07□□□□□ -2.4
SDC4P31431 AC106038.2-201ENST00000520706 568 ntBASIC0.07□□□□□ -2.4
SDC4P31431 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
SDC4P31431 MIR4778-201ENST00000577635 80 ntBASIC0.07□□□□□ -2.4
SDC4P31431 AC011195.1-201ENST00000578177 177 ntBASIC0.07□□□□□ -2.4
SDC4P31431 MIR4514-201ENST00000581410 57 ntBASIC0.07□□□□□ -2.4
SDC4P31431 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.07□□□□□ -2.4
SDC4P31431 AC064872.1-201ENST00000604823 1072 ntBASIC0.07□□□□□ -2.4
SDC4P31431 AL158032.1-201ENST00000605401 106 ntBASIC0.07□□□□□ -2.4
SDC4P31431 AC097065.2-201ENST00000608159 533 ntBASIC0.07□□□□□ -2.4
SDC4P31431 AC092574.1-201ENST00000609771 420 ntBASIC0.07□□□□□ -2.4
SDC4P31431 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.07□□□□□ -2.4
SDC4P31431 BX322639.1-202ENST00000423987 2213 ntBASIC0.06□□□□□ -2.4
SDC4P31431 RNU5B-4P-201ENST00000363508 111 ntBASIC0.06□□□□□ -2.4
SDC4P31431 U3.9-201ENST00000363823 204 ntBASIC0.06□□□□□ -2.4
SDC4P31431 RNU6-960P-201ENST00000364056 120 ntBASIC0.06□□□□□ -2.4
SDC4P31431 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
SDC4P31431 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
SDC4P31431 MIR489-201ENST00000384923 84 ntBASIC0.06□□□□□ -2.4
SDC4P31431 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.06□□□□□ -2.4
SDC4P31431 HMGN2P34-201ENST00000437647 269 ntBASIC0.06□□□□□ -2.4
SDC4P31431 AL133217.1-201ENST00000450980 425 ntBASIC0.06□□□□□ -2.4
SDC4P31431 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.06□□□□□ -2.4
SDC4P31431 AC007547.1-201ENST00000462177 490 ntBASIC0.06□□□□□ -2.4
SDC4P31431 AC105313.1-201ENST00000509121 353 ntBASIC0.06□□□□□ -2.4
SDC4P31431 AC109445.1-201ENST00000512356 383 ntBASIC0.06□□□□□ -2.4
SDC4P31431 RNA5SP216-201ENST00000516111 123 ntBASIC0.06□□□□□ -2.4
SDC4P31431 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.06□□□□□ -2.4
SDC4P31431 AC027419.1-201ENST00000522976 328 ntBASIC0.06□□□□□ -2.4
SDC4P31431 AP003072.2-201ENST00000527756 676 ntBASIC0.06□□□□□ -2.4
SDC4P31431 AC008752.3-201ENST00000588113 712 ntBASIC0.06□□□□□ -2.4
SDC4P31431 AL357312.1-201ENST00000603879 298 ntBASIC0.06□□□□□ -2.4
SDC4P31431 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.06□□□□□ -2.4
SDC4P31431 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.06□□□□□ -2.4
SDC4P31431 PCGEM1.1-201ENST00000613431 131 ntBASIC0.06□□□□□ -2.4
SDC4P31431 AL513423.1-201ENST00000621695 132 ntBASIC0.06□□□□□ -2.4
SDC4P31431 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
SDC4P31431 Y_RNA.192-201ENST00000363977 102 ntBASIC0.05□□□□□ -2.4
SDC4P31431 RNU4-67P-201ENST00000364569 141 ntBASIC0.05□□□□□ -2.4
SDC4P31431 RNU6-43P-201ENST00000384302 107 ntBASIC0.05□□□□□ -2.4
SDC4P31431 RNU6-692P-201ENST00000384496 107 ntBASIC0.05□□□□□ -2.4
SDC4P31431 RNY1P4-201ENST00000384595 115 ntBASIC0.05□□□□□ -2.4
SDC4P31431 RNU6-417P-201ENST00000384712 107 ntBASIC0.05□□□□□ -2.4
SDC4P31431 AL034345.1-201ENST00000407768 123 ntBASIC0.05□□□□□ -2.4
SDC4P31431 RNU2-62P-201ENST00000410868 191 ntBASIC0.05□□□□□ -2.4
SDC4P31431 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.05□□□□□ -2.4
SDC4P31431 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.05□□□□□ -2.4
SDC4P31431 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.05□□□□□ -2.4
SDC4P31431 AC025465.4-201ENST00000513422 638 ntBASIC0.05□□□□□ -2.4
SDC4P31431 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.05□□□□□ -2.4
SDC4P31431 AC016256.1-201ENST00000547971 354 ntBASIC0.05□□□□□ -2.4
SDC4P31431 AC023827.1-201ENST00000569247 97 ntBASIC0.05□□□□□ -2.4
SDC4P31431 AC023932.2-201ENST00000603176 175 ntBASIC0.05□□□□□ -2.4
SDC4P31431 AC022217.4-201ENST00000604389 163 ntBASIC0.05□□□□□ -2.4
SDC4P31431 BCRP9-201ENST00000605312 388 ntBASIC0.05□□□□□ -2.4
SDC4P31431 AL359547.2-201ENST00000615810 418 ntBASIC0.05□□□□□ -2.4
SDC4P31431 AC006927.4-201ENST00000639187 543 ntBASIC0.05□□□□□ -2.4
SDC4P31431 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.04□□□□□ -2.4
SDC4P31431 SNORA63.3-201ENST00000362682 132 ntBASIC0.04□□□□□ -2.4
SDC4P31431 RNU4-76P-201ENST00000364509 141 ntBASIC0.04□□□□□ -2.4
SDC4P31431 Y_RNA.287-201ENST00000364853 94 ntBASIC0.04□□□□□ -2.4
SDC4P31431 RNU5E-7P-201ENST00000365290 117 ntBASIC0.04□□□□□ -2.4
SDC4P31431 RNU6-1067P-201ENST00000384752 107 ntBASIC0.04□□□□□ -2.4
SDC4P31431 HSFY7P-201ENST00000432672 318 ntBASIC0.04□□□□□ -2.4
SDC4P31431 AC000111.3-201ENST00000433478 193 ntBASIC0.04□□□□□ -2.4
SDC4P31431 HSFY8P-201ENST00000437934 318 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms