Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
HOXC12P31275 CEP170P1-201ENST00000502249 4587 ntBASIC3.36□□□□□ -1.87
HOXC12P31275 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXC12P31275 Y_RNA.76-201ENST00000362931 109 ntBASIC3.36□□□□□ -1.87
HOXC12P31275 Y_RNA.117-201ENST00000363294 101 ntBASIC3.36□□□□□ -1.87
HOXC12P31275 RNA5SP197-201ENST00000363357 119 ntBASIC3.36□□□□□ -1.87
HOXC12P31275 Y_RNA.785-201ENST00000384290 109 ntBASIC3.36□□□□□ -1.87
HOXC12P31275 MIR199A2-201ENST00000385289 110 ntBASIC3.36□□□□□ -1.87
HOXC12P31275 MIR548I3-201ENST00000408378 149 ntBASIC3.36□□□□□ -1.87
HOXC12P31275 MIR548I1-201ENST00000408810 149 ntBASIC3.36□□□□□ -1.87
HOXC12P31275 AC004866.1-201ENST00000411748 78 ntBASIC3.36□□□□□ -1.87
HOXC12P31275 AL139156.1-201ENST00000412785 841 ntBASIC3.36□□□□□ -1.87
HOXC12P31275 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXC12P31275 PIGPP3-201ENST00000425307 415 ntBASIC3.36□□□□□ -1.87
HOXC12P31275 AL353705.1-201ENST00000433468 480 ntBASIC3.36□□□□□ -1.87
HOXC12P31275 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXC12P31275 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXC12P31275 SCARNA17.1-201ENST00000516211 143 ntBASIC3.36□□□□□ -1.87
HOXC12P31275 SCARNA17.2-201ENST00000516334 143 ntBASIC3.36□□□□□ -1.87
HOXC12P31275 Y_RNA.700-201ENST00000516806 100 ntBASIC3.36□□□□□ -1.87
HOXC12P31275 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXC12P31275 RPL21P9-201ENST00000556149 474 ntBASIC3.36□□□□□ -1.87
HOXC12P31275 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXC12P31275 AC087499.8-201ENST00000578406 226 ntBASIC3.36□□□□□ -1.87
HOXC12P31275 AC103810.1-201ENST00000579873 453 ntBASIC3.36□□□□□ -1.87
HOXC12P31275 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXC12P31275 AL162424.1-201ENST00000602325 221 ntBASIC3.36□□□□□ -1.87
HOXC12P31275 AC004832.5-201ENST00000608677 401 ntBASIC3.36□□□□□ -1.87
HOXC12P31275 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXC12P31275 SCARNA17.4-201ENST00000614296 143 ntBASIC3.36□□□□□ -1.87
HOXC12P31275 AC002064.3-201ENST00000623448 346 ntBASIC3.36□□□□□ -1.87
HOXC12P31275 MIR3674-201ENST00000636576 68 ntBASIC3.36□□□□□ -1.87
HOXC12P31275 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXC12P31275 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXC12P31275 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXC12P31275 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXC12P31275 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
HOXC12P31275 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXC12P31275 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXC12P31275 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.35□□□□□ -1.87
HOXC12P31275 AC091564.4-201ENST00000533934 2194 ntBASIC3.35□□□□□ -1.87
HOXC12P31275 AP003122.5-201ENST00000527668 3766 ntBASIC3.35□□□□□ -1.87
HOXC12P31275 Y_RNA.83-201ENST00000363005 113 ntBASIC3.35□□□□□ -1.87
HOXC12P31275 Y_RNA.199-201ENST00000364014 102 ntBASIC3.35□□□□□ -1.87
HOXC12P31275 Y_RNA.418-201ENST00000384029 102 ntBASIC3.35□□□□□ -1.87
HOXC12P31275 MIR218-2-201ENST00000385006 110 ntBASIC3.35□□□□□ -1.87
HOXC12P31275 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.35□□□□□ -1.87
HOXC12P31275 MTCO1P5-201ENST00000433573 344 ntBASIC3.35□□□□□ -1.87
HOXC12P31275 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXC12P31275 PRELID3BP1-201ENST00000457142 540 ntBASIC3.35□□□□□ -1.87
HOXC12P31275 AC106707.2-201ENST00000484182 374 ntBASIC3.35□□□□□ -1.87
HOXC12P31275 RAC1P5-201ENST00000512182 576 ntBASIC3.35□□□□□ -1.87
HOXC12P31275 RNA5SP112-201ENST00000515937 99 ntBASIC3.35□□□□□ -1.87
HOXC12P31275 RNU6-966P-201ENST00000516479 104 ntBASIC3.35□□□□□ -1.87
HOXC12P31275 RN7SKP282-201ENST00000516824 299 ntBASIC3.35□□□□□ -1.87
HOXC12P31275 RNU1-117P-201ENST00000517041 158 ntBASIC3.35□□□□□ -1.87
HOXC12P31275 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXC12P31275 DEFB131C-201ENST00000528817 165 ntBASIC3.35□□□□□ -1.87
HOXC12P31275 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.35□□□□□ -1.87
HOXC12P31275 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXC12P31275 SNORD11B-201ENST00000607707 90 ntBASIC3.35□□□□□ -1.87
HOXC12P31275 AC098479.1-201ENST00000609225 154 ntBASIC3.35□□□□□ -1.87
HOXC12P31275 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.35□□□□□ -1.87
HOXC12P31275 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXC12P31275 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXC12P31275 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
HOXC12P31275 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
HOXC12P31275 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXC12P31275 AC006504.1-201ENST00000562493 3666 ntBASIC3.34□□□□□ -1.87
HOXC12P31275 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.34□□□□□ -1.87
HOXC12P31275 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
HOXC12P31275 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.34□□□□□ -1.87
HOXC12P31275 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HOXC12P31275 Y_RNA.29-201ENST00000362570 113 ntBASIC3.34□□□□□ -1.87
HOXC12P31275 SNORD87-201ENST00000364849 89 ntBASIC3.34□□□□□ -1.87
HOXC12P31275 RNU6-1083P-201ENST00000384022 107 ntBASIC3.34□□□□□ -1.87
HOXC12P31275 RNVU1-14-201ENST00000384770 164 ntBASIC3.34□□□□□ -1.87
HOXC12P31275 AL035423.1-201ENST00000420331 213 ntBASIC3.34□□□□□ -1.87
HOXC12P31275 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXC12P31275 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXC12P31275 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.34□□□□□ -1.87
HOXC12P31275 AC091959.1-201ENST00000495857 238 ntBASIC3.34□□□□□ -1.87
HOXC12P31275 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.34□□□□□ -1.87
HOXC12P31275 RNU6-155P-201ENST00000516347 100 ntBASIC3.34□□□□□ -1.87
HOXC12P31275 Y_RNA.679-201ENST00000516416 91 ntBASIC3.34□□□□□ -1.87
HOXC12P31275 RNU6-344P-201ENST00000516635 111 ntBASIC3.34□□□□□ -1.87
HOXC12P31275 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXC12P31275 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXC12P31275 AL512605.2-201ENST00000592972 256 ntBASIC3.34□□□□□ -1.87
HOXC12P31275 AC005000.2-201ENST00000605468 310 ntBASIC3.34□□□□□ -1.87
HOXC12P31275 AC090517.3-201ENST00000625170 141 ntBASIC3.34□□□□□ -1.87
HOXC12P31275 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HOXC12P31275 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.34□□□□□ -1.88
HOXC12P31275 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
HOXC12P31275 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
HOXC12P31275 Y_RNA.136-201ENST00000363444 102 ntBASIC3.33□□□□□ -1.88
HOXC12P31275 Y_RNA.590-201ENST00000410140 107 ntBASIC3.33□□□□□ -1.88
HOXC12P31275 RNU6-651P-201ENST00000411040 105 ntBASIC3.33□□□□□ -1.88
HOXC12P31275 AC009237.7-201ENST00000447357 229 ntBASIC3.33□□□□□ -1.88
HOXC12P31275 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms