Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 RNU6-11P-201ENST00000364234 107 ntBASIC0.42□□□□□ -2.34
CASP1P29466 RNU4-12P-201ENST00000365233 139 ntBASIC0.42□□□□□ -2.34
CASP1P29466 RNU6-61P-201ENST00000365528 109 ntBASIC0.42□□□□□ -2.34
CASP1P29466 RNU6-25P-201ENST00000383873 107 ntBASIC0.42□□□□□ -2.34
CASP1P29466 RNU6-1-201ENST00000383898 107 ntBASIC0.42□□□□□ -2.34
CASP1P29466 RNU6-48P-201ENST00000384161 107 ntBASIC0.42□□□□□ -2.34
CASP1P29466 RNU6-36P-201ENST00000384172 107 ntBASIC0.42□□□□□ -2.34
CASP1P29466 RNU6-4P-201ENST00000384205 107 ntBASIC0.42□□□□□ -2.34
CASP1P29466 RNU6-5P-201ENST00000384238 107 ntBASIC0.42□□□□□ -2.34
CASP1P29466 RNU6-3P-201ENST00000384314 107 ntBASIC0.42□□□□□ -2.34
CASP1P29466 RNU6-16P-201ENST00000384385 107 ntBASIC0.42□□□□□ -2.34
CASP1P29466 RNU6-505P-201ENST00000384427 107 ntBASIC0.42□□□□□ -2.34
CASP1P29466 RNU6-15P-201ENST00000384534 107 ntBASIC0.42□□□□□ -2.34
CASP1P29466 RNU6-2-201ENST00000384627 107 ntBASIC0.42□□□□□ -2.34
CASP1P29466 RNU6-29P-201ENST00000384637 107 ntBASIC0.42□□□□□ -2.34
CASP1P29466 RNU6-9-201ENST00000384776 107 ntBASIC0.42□□□□□ -2.34
CASP1P29466 RNU6-33P-201ENST00000384793 107 ntBASIC0.42□□□□□ -2.34
CASP1P29466 MIR942-201ENST00000401111 86 ntBASIC0.42□□□□□ -2.34
CASP1P29466 AC244023.1-201ENST00000426884 112 ntBASIC0.42□□□□□ -2.34
CASP1P29466 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.42□□□□□ -2.34
CASP1P29466 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.42□□□□□ -2.34
CASP1P29466 SNRPGP9-201ENST00000456025 225 ntBASIC0.42□□□□□ -2.34
CASP1P29466 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.42□□□□□ -2.34
CASP1P29466 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.42□□□□□ -2.34
CASP1P29466 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.42□□□□□ -2.34
CASP1P29466 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.42□□□□□ -2.34
CASP1P29466 AC092451.2-201ENST00000538746 658 ntBASIC0.42□□□□□ -2.34
CASP1P29466 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.42□□□□□ -2.34
CASP1P29466 AC242498.1-201ENST00000604134 111 ntBASIC0.42□□□□□ -2.34
CASP1P29466 RNU6-6P-201ENST00000606623 107 ntBASIC0.42□□□□□ -2.34
CASP1P29466 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.42□□□□□ -2.34
CASP1P29466 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.42□□□□□ -2.34
CASP1P29466 AC243994.1-201ENST00000618627 109 ntBASIC0.42□□□□□ -2.34
CASP1P29466 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.42□□□□□ -2.34
CASP1P29466 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.42□□□□□ -2.34
CASP1P29466 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
CASP1P29466 snoU2-30.2-201ENST00000362805 70 ntBASIC0.41□□□□□ -2.34
CASP1P29466 RNU6-428P-201ENST00000362942 107 ntBASIC0.41□□□□□ -2.34
CASP1P29466 U3.8-201ENST00000363675 217 ntBASIC0.41□□□□□ -2.34
CASP1P29466 RNU1-133P-201ENST00000364867 167 ntBASIC0.41□□□□□ -2.34
CASP1P29466 RNU6-809P-201ENST00000384461 107 ntBASIC0.41□□□□□ -2.34
CASP1P29466 RNU6-1031P-201ENST00000384773 107 ntBASIC0.41□□□□□ -2.34
CASP1P29466 MTCYBP36-201ENST00000404146 440 ntBASIC0.41□□□□□ -2.34
CASP1P29466 RNU6-757P-201ENST00000410334 100 ntBASIC0.41□□□□□ -2.34
CASP1P29466 RNA5SP193-201ENST00000410353 107 ntBASIC0.41□□□□□ -2.34
CASP1P29466 AC007283.2-201ENST00000424739 197 ntBASIC0.41□□□□□ -2.34
CASP1P29466 AC010154.1-201ENST00000425857 269 ntBASIC0.41□□□□□ -2.34
CASP1P29466 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.41□□□□□ -2.34
CASP1P29466 RPL22P17-201ENST00000438729 315 ntBASIC0.41□□□□□ -2.34
CASP1P29466 MTCO3P18-201ENST00000440206 761 ntBASIC0.41□□□□□ -2.34
CASP1P29466 AL606517.2-201ENST00000442855 241 ntBASIC0.41□□□□□ -2.34
CASP1P29466 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.41□□□□□ -2.34
CASP1P29466 RPS26P48-201ENST00000491713 339 ntBASIC0.41□□□□□ -2.34
CASP1P29466 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.41□□□□□ -2.34
CASP1P29466 AC105758.1-201ENST00000506038 399 ntBASIC0.41□□□□□ -2.34
CASP1P29466 MTCO3P7-201ENST00000510008 774 ntBASIC0.41□□□□□ -2.34
CASP1P29466 AC116347.2-201ENST00000514912 523 ntBASIC0.41□□□□□ -2.34
CASP1P29466 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.41□□□□□ -2.34
CASP1P29466 Z98751.3-201ENST00000604447 521 ntBASIC0.41□□□□□ -2.34
CASP1P29466 RPL17P51-201ENST00000605218 238 ntBASIC0.41□□□□□ -2.34
CASP1P29466 AL353765.1-201ENST00000605514 183 ntBASIC0.41□□□□□ -2.34
CASP1P29466 AC009994.1-201ENST00000606889 253 ntBASIC0.41□□□□□ -2.34
CASP1P29466 AC019226.2-201ENST00000625973 424 ntBASIC0.41□□□□□ -2.34
CASP1P29466 SNORD3E-202ENST00000627253 216 ntBASIC0.41□□□□□ -2.34
CASP1P29466 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.34
CASP1P29466 AC092268.1-201ENST00000342691 405 ntBASIC0.4□□□□□ -2.35
CASP1P29466 RNU6-552P-201ENST00000362869 119 ntBASIC0.4□□□□□ -2.35
CASP1P29466 RNU6-1235P-201ENST00000384559 107 ntBASIC0.4□□□□□ -2.35
CASP1P29466 MIR558-201ENST00000384920 94 ntBASIC0.4□□□□□ -2.35
CASP1P29466 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.4□□□□□ -2.35
CASP1P29466 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.4□□□□□ -2.35
CASP1P29466 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.4□□□□□ -2.35
CASP1P29466 RNU2-39P-201ENST00000410604 198 ntBASIC0.4□□□□□ -2.35
CASP1P29466 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.4□□□□□ -2.35
CASP1P29466 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.4□□□□□ -2.35
CASP1P29466 AL133396.1-201ENST00000432048 687 ntBASIC0.4□□□□□ -2.35
CASP1P29466 HMGN2P34-201ENST00000437647 269 ntBASIC0.4□□□□□ -2.35
CASP1P29466 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.4□□□□□ -2.35
CASP1P29466 RNU6-498P-201ENST00000459468 107 ntBASIC0.4□□□□□ -2.35
CASP1P29466 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.4□□□□□ -2.35
CASP1P29466 RNU4-54P-201ENST00000516428 129 ntBASIC0.4□□□□□ -2.35
CASP1P29466 SNORA31.10-201ENST00000516482 106 ntBASIC0.4□□□□□ -2.35
CASP1P29466 RNU6-685P-201ENST00000517088 95 ntBASIC0.4□□□□□ -2.35
CASP1P29466 RNU6-1223P-201ENST00000517124 104 ntBASIC0.4□□□□□ -2.35
CASP1P29466 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.4□□□□□ -2.35
CASP1P29466 TMF1P1-201ENST00000576058 373 ntBASIC0.4□□□□□ -2.35
CASP1P29466 BNIP3P40-201ENST00000596017 556 ntBASIC0.4□□□□□ -2.35
CASP1P29466 AL513534.2-201ENST00000603836 250 ntBASIC0.4□□□□□ -2.35
CASP1P29466 AL031281.1-201ENST00000604049 488 ntBASIC0.4□□□□□ -2.35
CASP1P29466 AC009229.3-201ENST00000608056 282 ntBASIC0.4□□□□□ -2.35
CASP1P29466 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.4□□□□□ -2.35
CASP1P29466 MIR6513-201ENST00000621188 64 ntBASIC0.4□□□□□ -2.35
CASP1P29466 AC106858.1-201ENST00000637497 429 ntBASIC0.4□□□□□ -2.35
CASP1P29466 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.4□□□□□ -2.35
CASP1P29466 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
CASP1P29466 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.39□□□□□ -2.35
CASP1P29466 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.39□□□□□ -2.35
CASP1P29466 MED13P1-201ENST00000428342 171 ntBASIC0.39□□□□□ -2.35
CASP1P29466 GAPDHP17-201ENST00000449858 1001 ntBASIC0.39□□□□□ -2.35
CASP1P29466 MTCYBP1-201ENST00000454315 1119 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 263 ms