Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RPA1P27694 RNU6-1164P-201ENST00000364428 107 ntBASIC1.89□□□□□ -2.11
RPA1P27694 Y_RNA.248-201ENST00000364501 109 ntBASIC1.89□□□□□ -2.11
RPA1P27694 RNU6-336P-201ENST00000364891 107 ntBASIC1.89□□□□□ -2.11
RPA1P27694 RNU6-827P-201ENST00000365553 106 ntBASIC1.89□□□□□ -2.11
RPA1P27694 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
RPA1P27694 AL117339.3-201ENST00000418733 162 ntBASIC1.89□□□□□ -2.11
RPA1P27694 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.89□□□□□ -2.11
RPA1P27694 AL590632.1-201ENST00000424289 371 ntBASIC1.89□□□□□ -2.11
RPA1P27694 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.89□□□□□ -2.11
RPA1P27694 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.89□□□□□ -2.11
RPA1P27694 RNU6-189P-201ENST00000516120 101 ntBASIC1.89□□□□□ -2.11
RPA1P27694 RNU6-965P-201ENST00000516721 96 ntBASIC1.89□□□□□ -2.11
RPA1P27694 AC104576.1-201ENST00000524225 88 ntBASIC1.89□□□□□ -2.11
RPA1P27694 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.89□□□□□ -2.11
RPA1P27694 MIR4713-201ENST00000582691 75 ntBASIC1.89□□□□□ -2.11
RPA1P27694 AP003465.2-201ENST00000602571 373 ntBASIC1.89□□□□□ -2.11
RPA1P27694 AL034555.1-201ENST00000604816 211 ntBASIC1.89□□□□□ -2.11
RPA1P27694 AC068944.2-201ENST00000610373 403 ntBASIC1.89□□□□□ -2.11
RPA1P27694 AC092794.1-201ENST00000612734 582 ntBASIC1.89□□□□□ -2.11
RPA1P27694 DISC2.1-201ENST00000612827 205 ntBASIC1.89□□□□□ -2.11
RPA1P27694 AC063943.3-201ENST00000615562 356 ntBASIC1.89□□□□□ -2.11
RPA1P27694 U4.5-201ENST00000617137 123 ntBASIC1.89□□□□□ -2.11
RPA1P27694 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.89□□□□□ -2.11
RPA1P27694 AL133216.2-202ENST00000634512 349 ntBASIC1.89□□□□□ -2.11
RPA1P27694 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RPA1P27694 RN7SKP61-201ENST00000410642 295 ntBASIC1.88□□□□□ -2.11
RPA1P27694 EIF1P1-201ENST00000421436 341 ntBASIC1.88□□□□□ -2.11
RPA1P27694 BX510359.4-201ENST00000423750 193 ntBASIC1.88□□□□□ -2.11
RPA1P27694 AL513185.2-201ENST00000425543 193 ntBASIC1.88□□□□□ -2.11
RPA1P27694 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.88□□□□□ -2.11
RPA1P27694 AL031274.1-201ENST00000450334 232 ntBASIC1.88□□□□□ -2.11
RPA1P27694 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.88□□□□□ -2.11
RPA1P27694 Y_RNA.654-201ENST00000497848 106 ntBASIC1.88□□□□□ -2.11
RPA1P27694 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.88□□□□□ -2.11
RPA1P27694 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.88□□□□□ -2.11
RPA1P27694 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.88□□□□□ -2.11
RPA1P27694 AC092436.3-201ENST00000511788 257 ntBASIC1.88□□□□□ -2.11
RPA1P27694 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.88□□□□□ -2.11
RPA1P27694 RNU6-1088P-201ENST00000516850 104 ntBASIC1.88□□□□□ -2.11
RPA1P27694 SNORD60.2-201ENST00000516883 86 ntBASIC1.88□□□□□ -2.11
RPA1P27694 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.88□□□□□ -2.11
RPA1P27694 AC025423.5-201ENST00000550230 219 ntBASIC1.88□□□□□ -2.11
RPA1P27694 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.88□□□□□ -2.11
RPA1P27694 U2.17-201ENST00000611454 95 ntBASIC1.88□□□□□ -2.11
RPA1P27694 AC122108.2-201ENST00000611946 526 ntBASIC1.88□□□□□ -2.11
RPA1P27694 AL136221.1-201ENST00000621449 509 ntBASIC1.88□□□□□ -2.11
RPA1P27694 AC100810.6-201ENST00000638068 285 ntBASIC1.88□□□□□ -2.11
RPA1P27694 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RPA1P27694 CBX3P1-201ENST00000325243 554 ntBASIC1.87□□□□□ -2.11
RPA1P27694 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
RPA1P27694 RNU6-254P-201ENST00000363377 107 ntBASIC1.87□□□□□ -2.11
RPA1P27694 SNORD32B-201ENST00000364460 84 ntBASIC1.87□□□□□ -2.11
RPA1P27694 RNU6-160P-201ENST00000384591 107 ntBASIC1.87□□□□□ -2.11
RPA1P27694 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.87□□□□□ -2.11
RPA1P27694 AL591806.2-201ENST00000433122 173 ntBASIC1.87□□□□□ -2.11
RPA1P27694 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.87□□□□□ -2.11
RPA1P27694 RBMX2P4-201ENST00000441256 376 ntBASIC1.87□□□□□ -2.11
RPA1P27694 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.87□□□□□ -2.11
RPA1P27694 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.87□□□□□ -2.11
RPA1P27694 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.87□□□□□ -2.11
RPA1P27694 AC112492.4-201ENST00000456549 352 ntBASIC1.87□□□□□ -2.11
RPA1P27694 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.87□□□□□ -2.11
RPA1P27694 SNORA25.15-201ENST00000516487 89 ntBASIC1.87□□□□□ -2.11
RPA1P27694 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.87□□□□□ -2.11
RPA1P27694 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.87□□□□□ -2.11
RPA1P27694 CBX3P4-201ENST00000538909 354 ntBASIC1.87□□□□□ -2.11
RPA1P27694 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.87□□□□□ -2.11
RPA1P27694 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.87□□□□□ -2.11
RPA1P27694 ZNF519P2-201ENST00000557032 169 ntBASIC1.87□□□□□ -2.11
RPA1P27694 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.87□□□□□ -2.11
RPA1P27694 MIR3672-201ENST00000584290 82 ntBASIC1.87□□□□□ -2.11
RPA1P27694 AC002553.4-201ENST00000616896 331 ntBASIC1.87□□□□□ -2.11
RPA1P27694 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.87□□□□□ -2.11
RPA1P27694 MIR1248-201ENST00000629190 106 ntBASIC1.87□□□□□ -2.11
RPA1P27694 AC092268.1-201ENST00000342691 405 ntBASIC1.86□□□□□ -2.11
RPA1P27694 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RPA1P27694 RNU6-831P-201ENST00000384548 107 ntBASIC1.86□□□□□ -2.11
RPA1P27694 MIR764-201ENST00000390811 85 ntBASIC1.86□□□□□ -2.11
RPA1P27694 MIR1277-201ENST00000408536 78 ntBASIC1.86□□□□□ -2.11
RPA1P27694 AC009310.1-201ENST00000414414 451 ntBASIC1.86□□□□□ -2.11
RPA1P27694 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.86□□□□□ -2.11
RPA1P27694 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.86□□□□□ -2.11
RPA1P27694 AC244670.1-201ENST00000436879 112 ntBASIC1.86□□□□□ -2.11
RPA1P27694 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.86□□□□□ -2.11
RPA1P27694 AL035666.1-201ENST00000446195 348 ntBASIC1.86□□□□□ -2.11
RPA1P27694 FGF7P6-202ENST00000451282 293 ntBASIC1.86□□□□□ -2.11
RPA1P27694 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.86□□□□□ -2.11
RPA1P27694 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.86□□□□□ -2.11
RPA1P27694 MTCO2P30-201ENST00000503662 364 ntBASIC1.86□□□□□ -2.11
RPA1P27694 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.86□□□□□ -2.11
RPA1P27694 FAM206BP-201ENST00000510179 541 ntBASIC1.86□□□□□ -2.11
RPA1P27694 RNU6-1332P-201ENST00000516666 104 ntBASIC1.86□□□□□ -2.11
RPA1P27694 RNU2-44P-201ENST00000516795 194 ntBASIC1.86□□□□□ -2.11
RPA1P27694 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.86□□□□□ -2.11
RPA1P27694 RNU6-323P-201ENST00000521915 107 ntBASIC1.86□□□□□ -2.11
RPA1P27694 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.86□□□□□ -2.11
RPA1P27694 SCOCP1-201ENST00000554676 349 ntBASIC1.86□□□□□ -2.11
RPA1P27694 AC022254.1-201ENST00000567857 235 ntBASIC1.86□□□□□ -2.11
RPA1P27694 MIR502-201ENST00000606349 86 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms