Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 RN7SL177P-201ENST00000476596 299 ntBASIC3.36□□□□□ -1.87
VAMP1P23763 Y_RNA.673-201ENST00000516306 88 ntBASIC3.36□□□□□ -1.87
VAMP1P23763 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.36□□□□□ -1.87
VAMP1P23763 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VAMP1P23763 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.36□□□□□ -1.87
VAMP1P23763 MIR4330-201ENST00000579077 105 ntBASIC3.36□□□□□ -1.87
VAMP1P23763 MIR4737-201ENST00000583979 81 ntBASIC3.36□□□□□ -1.87
VAMP1P23763 DEFB117-201ENST00000602356 141 ntBASIC3.36□□□□□ -1.87
VAMP1P23763 AC211433.2-201ENST00000608433 387 ntBASIC3.36□□□□□ -1.87
VAMP1P23763 MIR6886-201ENST00000619864 61 ntBASIC3.36□□□□□ -1.87
VAMP1P23763 MIR6730-201ENST00000622213 67 ntBASIC3.36□□□□□ -1.87
VAMP1P23763 AC127459.3-201ENST00000624328 466 ntBASIC3.36□□□□□ -1.87
VAMP1P23763 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VAMP1P23763 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VAMP1P23763 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VAMP1P23763 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VAMP1P23763 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
VAMP1P23763 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VAMP1P23763 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.35□□□□□ -1.87
VAMP1P23763 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
VAMP1P23763 Y_RNA.44-201ENST00000362676 108 ntBASIC3.35□□□□□ -1.87
VAMP1P23763 RNU1-14P-201ENST00000362759 152 ntBASIC3.35□□□□□ -1.87
VAMP1P23763 RNU6-407P-201ENST00000365280 104 ntBASIC3.35□□□□□ -1.87
VAMP1P23763 RPL37P18-201ENST00000411602 243 ntBASIC3.35□□□□□ -1.87
VAMP1P23763 AC079355.1-201ENST00000421770 223 ntBASIC3.35□□□□□ -1.87
VAMP1P23763 AC010326.1-201ENST00000462726 602 ntBASIC3.35□□□□□ -1.87
VAMP1P23763 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.35□□□□□ -1.87
VAMP1P23763 RNU6-1146P-201ENST00000516282 102 ntBASIC3.35□□□□□ -1.87
VAMP1P23763 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.35□□□□□ -1.87
VAMP1P23763 MIR4489-201ENST00000578869 62 ntBASIC3.35□□□□□ -1.87
VAMP1P23763 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.35□□□□□ -1.87
VAMP1P23763 MFSD8-236ENST00000641509 4050 ntBASIC3.35□□□□□ -1.87
VAMP1P23763 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
VAMP1P23763 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
VAMP1P23763 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
VAMP1P23763 RNU4-80P-201ENST00000363200 141 ntBASIC3.34□□□□□ -1.87
VAMP1P23763 SNORD113.2-201ENST00000364166 89 ntBASIC3.34□□□□□ -1.87
VAMP1P23763 Y_RNA.416-201ENST00000384014 113 ntBASIC3.34□□□□□ -1.87
VAMP1P23763 PHBP16-201ENST00000446318 950 ntBASIC3.34□□□□□ -1.87
VAMP1P23763 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.34□□□□□ -1.87
VAMP1P23763 AC010598.1-201ENST00000510378 103 ntBASIC3.34□□□□□ -1.87
VAMP1P23763 RNA5SP519-201ENST00000516480 119 ntBASIC3.34□□□□□ -1.87
VAMP1P23763 RNA5SP34-201ENST00000516887 130 ntBASIC3.34□□□□□ -1.87
VAMP1P23763 IGLVIV-65-201ENST00000517313 360 ntBASIC3.34□□□□□ -1.87
VAMP1P23763 CYCSP26-201ENST00000534107 320 ntBASIC3.34□□□□□ -1.87
VAMP1P23763 AC008011.1-201ENST00000545989 227 ntBASIC3.34□□□□□ -1.87
VAMP1P23763 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.34□□□□□ -1.87
VAMP1P23763 MIR3934-201ENST00000579806 107 ntBASIC3.34□□□□□ -1.87
VAMP1P23763 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.34□□□□□ -1.87
VAMP1P23763 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.34□□□□□ -1.87
VAMP1P23763 AC090425.1-201ENST00000610007 140 ntBASIC3.34□□□□□ -1.87
VAMP1P23763 U2.14-201ENST00000615943 113 ntBASIC3.34□□□□□ -1.87
VAMP1P23763 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VAMP1P23763 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
VAMP1P23763 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
VAMP1P23763 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
VAMP1P23763 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
VAMP1P23763 AL159152.1-201ENST00000635019 2587 ntBASIC3.33□□□□□ -1.88
VAMP1P23763 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
VAMP1P23763 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.33□□□□□ -1.88
VAMP1P23763 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
VAMP1P23763 SNORD115-30-201ENST00000364117 82 ntBASIC3.33□□□□□ -1.88
VAMP1P23763 Y_RNA.243-201ENST00000364481 109 ntBASIC3.33□□□□□ -1.88
VAMP1P23763 RNU6-1072P-201ENST00000384703 107 ntBASIC3.33□□□□□ -1.88
VAMP1P23763 RNU6-443P-201ENST00000384780 107 ntBASIC3.33□□□□□ -1.88
VAMP1P23763 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.33□□□□□ -1.88
VAMP1P23763 AL031121.1-201ENST00000406553 254 ntBASIC3.33□□□□□ -1.88
VAMP1P23763 AL603910.2-201ENST00000407268 136 ntBASIC3.33□□□□□ -1.88
VAMP1P23763 RNU6-1199P-201ENST00000411249 104 ntBASIC3.33□□□□□ -1.88
VAMP1P23763 AC010154.1-201ENST00000425857 269 ntBASIC3.33□□□□□ -1.88
VAMP1P23763 MTCO1P5-201ENST00000433573 344 ntBASIC3.33□□□□□ -1.88
VAMP1P23763 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
VAMP1P23763 AC006011.1-201ENST00000442758 349 ntBASIC3.33□□□□□ -1.88
VAMP1P23763 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.33□□□□□ -1.88
VAMP1P23763 RPS27P29-201ENST00000463110 252 ntBASIC3.33□□□□□ -1.88
VAMP1P23763 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.33□□□□□ -1.88
VAMP1P23763 RNU6-1023P-201ENST00000516137 106 ntBASIC3.33□□□□□ -1.88
VAMP1P23763 RNU6-436P-201ENST00000516171 114 ntBASIC3.33□□□□□ -1.88
VAMP1P23763 Y_RNA.679-201ENST00000516416 91 ntBASIC3.33□□□□□ -1.88
VAMP1P23763 AC025627.2-201ENST00000576220 160 ntBASIC3.33□□□□□ -1.88
VAMP1P23763 MIR4658-201ENST00000584344 65 ntBASIC3.33□□□□□ -1.88
VAMP1P23763 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.33□□□□□ -1.88
VAMP1P23763 SDR42E1P1-201ENST00000611327 477 ntBASIC3.33□□□□□ -1.88
VAMP1P23763 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VAMP1P23763 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.33□□□□□ -1.88
VAMP1P23763 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.33□□□□□ -1.88
VAMP1P23763 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
VAMP1P23763 Y_RNA.60-201ENST00000362831 98 ntBASIC3.32□□□□□ -1.88
VAMP1P23763 Y_RNA.136-201ENST00000363444 102 ntBASIC3.32□□□□□ -1.88
VAMP1P23763 Y_RNA.515-201ENST00000384535 112 ntBASIC3.32□□□□□ -1.88
VAMP1P23763 Y_RNA.552-201ENST00000384665 112 ntBASIC3.32□□□□□ -1.88
VAMP1P23763 Y_RNA.562-201ENST00000384695 113 ntBASIC3.32□□□□□ -1.88
VAMP1P23763 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.32□□□□□ -1.88
VAMP1P23763 RPL23AP27-201ENST00000415161 451 ntBASIC3.32□□□□□ -1.88
VAMP1P23763 AL691449.1-201ENST00000426570 421 ntBASIC3.32□□□□□ -1.88
VAMP1P23763 HMGN2P34-201ENST00000437647 269 ntBASIC3.32□□□□□ -1.88
VAMP1P23763 AL109933.2-201ENST00000452651 260 ntBASIC3.32□□□□□ -1.88
VAMP1P23763 RPS27P22-201ENST00000478056 241 ntBASIC3.32□□□□□ -1.88
VAMP1P23763 RN7SL826P-201ENST00000479724 288 ntBASIC3.32□□□□□ -1.88
VAMP1P23763 AC091959.1-201ENST00000495857 238 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms