Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC012442.3-202ENST00000636742 206 ntBASIC3.35□□□□□ -1.87
COL6A2P12110 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL6A2P12110 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.35□□□□□ -1.87
COL6A2P12110 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL6A2P12110 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL6A2P12110 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL6A2P12110 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.35□□□□□ -1.87
COL6A2P12110 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
COL6A2P12110 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
COL6A2P12110 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
COL6A2P12110 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
COL6A2P12110 Y_RNA.65-201ENST00000362846 100 ntBASIC3.34□□□□□ -1.87
COL6A2P12110 Y_RNA.269-201ENST00000364685 89 ntBASIC3.34□□□□□ -1.87
COL6A2P12110 RNU6-21P-201ENST00000384710 107 ntBASIC3.34□□□□□ -1.87
COL6A2P12110 Y_RNA.569-201ENST00000384749 103 ntBASIC3.34□□□□□ -1.87
COL6A2P12110 RNU4-30P-201ENST00000410245 143 ntBASIC3.34□□□□□ -1.87
COL6A2P12110 RNU6-182P-201ENST00000516970 105 ntBASIC3.34□□□□□ -1.87
COL6A2P12110 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.34□□□□□ -1.87
COL6A2P12110 AC079598.5-201ENST00000547460 117 ntBASIC3.34□□□□□ -1.87
COL6A2P12110 MIR4643-201ENST00000577473 78 ntBASIC3.34□□□□□ -1.87
COL6A2P12110 AC005176.2-201ENST00000596933 147 ntBASIC3.34□□□□□ -1.87
COL6A2P12110 MZT1P2-201ENST00000604387 248 ntBASIC3.34□□□□□ -1.87
COL6A2P12110 AC084757.4-201ENST00000616350 526 ntBASIC3.34□□□□□ -1.87
COL6A2P12110 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
COL6A2P12110 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.34□□□□□ -1.87
COL6A2P12110 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
COL6A2P12110 AP003122.5-201ENST00000527668 3766 ntBASIC3.34□□□□□ -1.88
COL6A2P12110 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.34□□□□□ -1.88
COL6A2P12110 AC099654.7-201ENST00000635788 2127 ntBASIC3.34□□□□□ -1.88
COL6A2P12110 AC000403.1-201ENST00000613696 3585 ntBASIC3.33□□□□□ -1.88
COL6A2P12110 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL6A2P12110 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
COL6A2P12110 Y_RNA.44-201ENST00000362676 108 ntBASIC3.33□□□□□ -1.88
COL6A2P12110 Y_RNA.117-201ENST00000363294 101 ntBASIC3.33□□□□□ -1.88
COL6A2P12110 SNORA14A-201ENST00000364773 135 ntBASIC3.33□□□□□ -1.88
COL6A2P12110 RNU6-1175P-201ENST00000365200 107 ntBASIC3.33□□□□□ -1.88
COL6A2P12110 RNU6-1027P-201ENST00000383998 107 ntBASIC3.33□□□□□ -1.88
COL6A2P12110 RNU6-378P-201ENST00000384324 107 ntBASIC3.33□□□□□ -1.88
COL6A2P12110 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
COL6A2P12110 RPL23AP36-201ENST00000413895 458 ntBASIC3.33□□□□□ -1.88
COL6A2P12110 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.33□□□□□ -1.88
COL6A2P12110 RBMY2UP-201ENST00000453474 324 ntBASIC3.33□□□□□ -1.88
COL6A2P12110 RPS3P1-201ENST00000456781 192 ntBASIC3.33□□□□□ -1.88
COL6A2P12110 AL031183.1-201ENST00000457667 207 ntBASIC3.33□□□□□ -1.88
COL6A2P12110 RPL23AP70-201ENST00000483361 460 ntBASIC3.33□□□□□ -1.88
COL6A2P12110 FCF1P8-201ENST00000510322 597 ntBASIC3.33□□□□□ -1.88
COL6A2P12110 AC018448.1-201ENST00000552843 316 ntBASIC3.33□□□□□ -1.88
COL6A2P12110 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.33□□□□□ -1.88
COL6A2P12110 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.33□□□□□ -1.88
COL6A2P12110 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.33□□□□□ -1.88
COL6A2P12110 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.33□□□□□ -1.88
COL6A2P12110 AC022441.3-201ENST00000605737 136 ntBASIC3.33□□□□□ -1.88
COL6A2P12110 AC037487.3-201ENST00000606668 112 ntBASIC3.33□□□□□ -1.88
COL6A2P12110 AL590240.4-201ENST00000616908 390 ntBASIC3.33□□□□□ -1.88
COL6A2P12110 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.33□□□□□ -1.88
COL6A2P12110 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.33□□□□□ -1.88
COL6A2P12110 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL6A2P12110 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.33□□□□□ -1.88
COL6A2P12110 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.32□□□□□ -1.88
COL6A2P12110 SNORA63.1-201ENST00000362493 131 ntBASIC3.32□□□□□ -1.88
COL6A2P12110 Y_RNA.29-201ENST00000362570 113 ntBASIC3.32□□□□□ -1.88
COL6A2P12110 RNU4-15P-201ENST00000362613 141 ntBASIC3.32□□□□□ -1.88
COL6A2P12110 Y_RNA.136-201ENST00000363444 102 ntBASIC3.32□□□□□ -1.88
COL6A2P12110 RNU1-105P-201ENST00000363470 161 ntBASIC3.32□□□□□ -1.88
COL6A2P12110 SNORD56.3-201ENST00000363507 71 ntBASIC3.32□□□□□ -1.88
COL6A2P12110 RNU6-1210P-201ENST00000363775 107 ntBASIC3.32□□□□□ -1.88
COL6A2P12110 RNU6-209P-201ENST00000384118 107 ntBASIC3.32□□□□□ -1.88
COL6A2P12110 MIR186-201ENST00000384988 86 ntBASIC3.32□□□□□ -1.88
COL6A2P12110 SNORA11.2-201ENST00000408318 127 ntBASIC3.32□□□□□ -1.88
COL6A2P12110 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.32□□□□□ -1.88
COL6A2P12110 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.32□□□□□ -1.88
COL6A2P12110 PRSS3P4-201ENST00000453323 162 ntBASIC3.32□□□□□ -1.88
COL6A2P12110 AP001324.2-201ENST00000461163 319 ntBASIC3.32□□□□□ -1.88
COL6A2P12110 AC091179.3-201ENST00000474761 144 ntBASIC3.32□□□□□ -1.88
COL6A2P12110 SNORA81.3-201ENST00000517283 198 ntBASIC3.32□□□□□ -1.88
COL6A2P12110 EIF4A1P12-201ENST00000551910 141 ntBASIC3.32□□□□□ -1.88
COL6A2P12110 AC026470.2-201ENST00000561492 181 ntBASIC3.32□□□□□ -1.88
COL6A2P12110 AC008749.1-201ENST00000597650 306 ntBASIC3.32□□□□□ -1.88
COL6A2P12110 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
COL6A2P12110 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.32□□□□□ -1.88
COL6A2P12110 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.32□□□□□ -1.88
COL6A2P12110 MAPK10-322ENST00000641485 4530 ntBASIC3.32□□□□□ -1.88
COL6A2P12110 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL6A2P12110 Y_RNA.200-201ENST00000364018 102 ntBASIC3.31□□□□□ -1.88
COL6A2P12110 SNORA18.3-201ENST00000384122 132 ntBASIC3.31□□□□□ -1.88
COL6A2P12110 RNU1-57P-201ENST00000384491 166 ntBASIC3.31□□□□□ -1.88
COL6A2P12110 AL512633.1-201ENST00000399931 655 ntBASIC3.31□□□□□ -1.88
COL6A2P12110 ELOCP21-201ENST00000412558 336 ntBASIC3.31□□□□□ -1.88
COL6A2P12110 YME1L1P1-201ENST00000429435 297 ntBASIC3.31□□□□□ -1.88
COL6A2P12110 MTND5P15-201ENST00000434246 349 ntBASIC3.31□□□□□ -1.88
COL6A2P12110 RPL7P49-201ENST00000471402 708 ntBASIC3.31□□□□□ -1.88
COL6A2P12110 AL121594.1-201ENST00000475906 575 ntBASIC3.31□□□□□ -1.88
COL6A2P12110 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.31□□□□□ -1.88
COL6A2P12110 SCARNA13-201ENST00000516672 275 ntBASIC3.31□□□□□ -1.88
COL6A2P12110 RRN3P3-201ENST00000549207 578 ntBASIC3.31□□□□□ -1.88
COL6A2P12110 AL162713.1-201ENST00000604480 262 ntBASIC3.31□□□□□ -1.88
COL6A2P12110 AL161756.2-201ENST00000604597 246 ntBASIC3.31□□□□□ -1.88
COL6A2P12110 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.31□□□□□ -1.88
COL6A2P12110 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.31□□□□□ -1.88
COL6A2P12110 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms