Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.75□□□□□ -2.29
TPM1P09493 AC004941.2-201ENST00000427009 228 ntBASIC0.75□□□□□ -2.29
TPM1P09493 HMGN2P34-201ENST00000437647 269 ntBASIC0.75□□□□□ -2.29
TPM1P09493 AC091874.1-201ENST00000511402 339 ntBASIC0.75□□□□□ -2.29
TPM1P09493 SCARNA24.1-201ENST00000516465 137 ntBASIC0.75□□□□□ -2.29
TPM1P09493 RNU6-1178P-201ENST00000516674 107 ntBASIC0.75□□□□□ -2.29
TPM1P09493 AC024995.1-201ENST00000523014 93 ntBASIC0.75□□□□□ -2.29
TPM1P09493 AL590705.4-201ENST00000532209 134 ntBASIC0.75□□□□□ -2.29
TPM1P09493 AC025423.5-201ENST00000550230 219 ntBASIC0.75□□□□□ -2.29
TPM1P09493 AC004817.2-201ENST00000561794 651 ntBASIC0.75□□□□□ -2.29
TPM1P09493 PCMTD1P2-201ENST00000565017 355 ntBASIC0.75□□□□□ -2.29
TPM1P09493 MIR4509-3-201ENST00000578671 94 ntBASIC0.75□□□□□ -2.29
TPM1P09493 MIR3973-201ENST00000579824 107 ntBASIC0.75□□□□□ -2.29
TPM1P09493 MIR4509-2-201ENST00000583920 94 ntBASIC0.75□□□□□ -2.29
TPM1P09493 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.75□□□□□ -2.29
TPM1P09493 AP000811.1-201ENST00000603803 651 ntBASIC0.75□□□□□ -2.29
TPM1P09493 AL031281.1-201ENST00000604049 488 ntBASIC0.75□□□□□ -2.29
TPM1P09493 AC018714.1-201ENST00000605028 208 ntBASIC0.75□□□□□ -2.29
TPM1P09493 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.75□□□□□ -2.29
TPM1P09493 MIR4509-1-201ENST00000618224 94 ntBASIC0.75□□□□□ -2.29
TPM1P09493 AC009878.1-201ENST00000621819 340 ntBASIC0.75□□□□□ -2.29
TPM1P09493 MTND5P17-201ENST00000418405 1603 ntBASIC0.75□□□□□ -2.29
TPM1P09493 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.74□□□□□ -2.29
TPM1P09493 RNU6-501P-201ENST00000364072 100 ntBASIC0.74□□□□□ -2.29
TPM1P09493 SNORA18.2-201ENST00000383865 132 ntBASIC0.74□□□□□ -2.29
TPM1P09493 SNORA36A-201ENST00000384221 132 ntBASIC0.74□□□□□ -2.29
TPM1P09493 RNU6-1235P-201ENST00000384559 107 ntBASIC0.74□□□□□ -2.29
TPM1P09493 RNU6-906P-201ENST00000384700 70 ntBASIC0.74□□□□□ -2.29
TPM1P09493 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.74□□□□□ -2.29
TPM1P09493 AC012306.1-201ENST00000423267 114 ntBASIC0.74□□□□□ -2.29
TPM1P09493 AL133217.1-201ENST00000450980 425 ntBASIC0.74□□□□□ -2.29
TPM1P09493 MTCYBP1-201ENST00000454315 1119 ntBASIC0.74□□□□□ -2.29
TPM1P09493 RNU6-498P-201ENST00000459468 107 ntBASIC0.74□□□□□ -2.29
TPM1P09493 AC117454.1-201ENST00000491120 168 ntBASIC0.74□□□□□ -2.29
TPM1P09493 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
TPM1P09493 SNORD79.1-201ENST00000516069 84 ntBASIC0.74□□□□□ -2.29
TPM1P09493 RNU6-1146P-201ENST00000516282 102 ntBASIC0.74□□□□□ -2.29
TPM1P09493 RNU6-948P-201ENST00000516374 107 ntBASIC0.74□□□□□ -2.29
TPM1P09493 AL121579.1-201ENST00000555129 305 ntBASIC0.74□□□□□ -2.29
TPM1P09493 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.74□□□□□ -2.29
TPM1P09493 AC022432.1-201ENST00000595739 310 ntBASIC0.74□□□□□ -2.29
TPM1P09493 AL513534.2-201ENST00000603836 250 ntBASIC0.74□□□□□ -2.29
TPM1P09493 AC016727.2-201ENST00000603988 621 ntBASIC0.74□□□□□ -2.29
TPM1P09493 AL049777.1-201ENST00000622740 518 ntBASIC0.74□□□□□ -2.29
TPM1P09493 RNU6-1031P-201ENST00000384773 107 ntBASIC0.73□□□□□ -2.29
TPM1P09493 RNA5SP109-201ENST00000391010 116 ntBASIC0.73□□□□□ -2.29
TPM1P09493 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
TPM1P09493 AC092991.1-201ENST00000477176 376 ntBASIC0.73□□□□□ -2.29
TPM1P09493 AC091951.3-201ENST00000504093 246 ntBASIC0.73□□□□□ -2.29
TPM1P09493 LRRC34P2-201ENST00000514850 553 ntBASIC0.73□□□□□ -2.29
TPM1P09493 RNU6-1220P-201ENST00000517126 108 ntBASIC0.73□□□□□ -2.29
TPM1P09493 MIR5695-201ENST00000579717 85 ntBASIC0.73□□□□□ -2.29
TPM1P09493 MIR4999-201ENST00000585029 91 ntBASIC0.73□□□□□ -2.29
TPM1P09493 AC009159.2-201ENST00000617603 606 ntBASIC0.73□□□□□ -2.29
TPM1P09493 RNU6-1287P-201ENST00000362914 107 ntBASIC0.72□□□□□ -2.29
TPM1P09493 SNORA20.2-201ENST00000383922 131 ntBASIC0.72□□□□□ -2.29
TPM1P09493 RNU6-1060P-201ENST00000384664 107 ntBASIC0.72□□□□□ -2.29
TPM1P09493 RPS3AP1-201ENST00000413190 320 ntBASIC0.72□□□□□ -2.29
TPM1P09493 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.72□□□□□ -2.29
TPM1P09493 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.72□□□□□ -2.29
TPM1P09493 AC090960.1-201ENST00000421072 306 ntBASIC0.72□□□□□ -2.29
TPM1P09493 AL365184.2-201ENST00000431139 435 ntBASIC0.72□□□□□ -2.29
TPM1P09493 AC245047.7-201ENST00000440265 293 ntBASIC0.72□□□□□ -2.29
TPM1P09493 AC244505.5-201ENST00000443639 207 ntBASIC0.72□□□□□ -2.29
TPM1P09493 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.72□□□□□ -2.29
TPM1P09493 AK3P2-201ENST00000507976 429 ntBASIC0.72□□□□□ -2.29
TPM1P09493 MTCO3P7-201ENST00000510008 774 ntBASIC0.72□□□□□ -2.29
TPM1P09493 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.72□□□□□ -2.29
TPM1P09493 Y_RNA.672-201ENST00000516289 104 ntBASIC0.72□□□□□ -2.29
TPM1P09493 DEFB131C-201ENST00000528817 165 ntBASIC0.72□□□□□ -2.29
TPM1P09493 AL590095.2-201ENST00000604136 117 ntBASIC0.72□□□□□ -2.29
TPM1P09493 AP001836.1-201ENST00000604675 523 ntBASIC0.72□□□□□ -2.29
TPM1P09493 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.72□□□□□ -2.29
TPM1P09493 MIR6835-201ENST00000621552 64 ntBASIC0.72□□□□□ -2.29
TPM1P09493 AL359697.1-201ENST00000624879 587 ntBASIC0.72□□□□□ -2.29
TPM1P09493 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.72□□□□□ -2.29
TPM1P09493 SNORA43.4-201ENST00000629559 138 ntBASIC0.72□□□□□ -2.29
TPM1P09493 U6.114-201ENST00000636407 96 ntBASIC0.72□□□□□ -2.29
TPM1P09493 RNU6-392P-201ENST00000364926 101 ntBASIC0.71□□□□□ -2.3
TPM1P09493 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.71□□□□□ -2.3
TPM1P09493 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.71□□□□□ -2.3
TPM1P09493 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.71□□□□□ -2.3
TPM1P09493 AC010486.2-201ENST00000505572 483 ntBASIC0.71□□□□□ -2.3
TPM1P09493 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.71□□□□□ -2.3
TPM1P09493 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.71□□□□□ -2.3
TPM1P09493 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.71□□□□□ -2.3
TPM1P09493 AC068790.6-201ENST00000602558 258 ntBASIC0.71□□□□□ -2.3
TPM1P09493 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.71□□□□□ -2.3
TPM1P09493 AC011155.2-201ENST00000623202 216 ntBASIC0.71□□□□□ -2.3
TPM1P09493 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.71□□□□□ -2.3
TPM1P09493 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
TPM1P09493 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
TPM1P09493 RNU6-975P-201ENST00000384296 105 ntBASIC0.7□□□□□ -2.3
TPM1P09493 RNU6-1093P-201ENST00000391194 107 ntBASIC0.7□□□□□ -2.3
TPM1P09493 RNU6-733P-201ENST00000410759 104 ntBASIC0.7□□□□□ -2.3
TPM1P09493 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.7□□□□□ -2.3
TPM1P09493 AC010154.1-201ENST00000425857 269 ntBASIC0.7□□□□□ -2.3
TPM1P09493 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.7□□□□□ -2.3
TPM1P09493 AL031274.1-201ENST00000450334 232 ntBASIC0.7□□□□□ -2.3
TPM1P09493 MTATP6P14-201ENST00000455189 673 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms