Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SYPP08247 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SYPP08247 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SYPP08247 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.55□□□□□ -1.84
SYPP08247 AL359854.1-201ENST00000614203 1594 ntBASIC3.55□□□□□ -1.84
SYPP08247 MFSD8-236ENST00000641509 4050 ntBASIC3.54□□□□□ -1.84
SYPP08247 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.54□□□□□ -1.84
SYPP08247 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
SYPP08247 RNU6-653P-201ENST00000363074 106 ntBASIC3.54□□□□□ -1.84
SYPP08247 RNU4-56P-201ENST00000364700 142 ntBASIC3.54□□□□□ -1.84
SYPP08247 RNU6-211P-201ENST00000384047 107 ntBASIC3.54□□□□□ -1.84
SYPP08247 RNU6-1310P-201ENST00000384153 107 ntBASIC3.54□□□□□ -1.84
SYPP08247 RNU6-748P-201ENST00000384648 107 ntBASIC3.54□□□□□ -1.84
SYPP08247 RNU6-19P-201ENST00000384718 107 ntBASIC3.54□□□□□ -1.84
SYPP08247 CBX3P9-201ENST00000402326 552 ntBASIC3.54□□□□□ -1.84
SYPP08247 RNU2-54P-201ENST00000410299 190 ntBASIC3.54□□□□□ -1.84
SYPP08247 AC107626.1-201ENST00000471084 183 ntBASIC3.54□□□□□ -1.84
SYPP08247 SNORA70.14-201ENST00000516205 110 ntBASIC3.54□□□□□ -1.84
SYPP08247 RNU6-346P-201ENST00000516288 111 ntBASIC3.54□□□□□ -1.84
SYPP08247 AC090877.1-201ENST00000561418 344 ntBASIC3.54□□□□□ -1.84
SYPP08247 AC105137.2-201ENST00000569073 466 ntBASIC3.54□□□□□ -1.84
SYPP08247 MIR5692C2-201ENST00000577959 77 ntBASIC3.54□□□□□ -1.84
SYPP08247 MIR3923-201ENST00000579521 83 ntBASIC3.54□□□□□ -1.84
SYPP08247 MIR4513-201ENST00000581077 86 ntBASIC3.54□□□□□ -1.84
SYPP08247 RNU6-91P-201ENST00000607774 107 ntBASIC3.54□□□□□ -1.84
SYPP08247 AL365265.1-201ENST00000621045 234 ntBASIC3.54□□□□□ -1.84
SYPP08247 AP003355.3-201ENST00000623465 114 ntBASIC3.54□□□□□ -1.84
SYPP08247 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.54□□□□□ -1.84
SYPP08247 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.54□□□□□ -1.84
SYPP08247 TNPO1P3-201ENST00000436471 2662 ntBASIC3.54□□□□□ -1.84
SYPP08247 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SYPP08247 UBE3AP2-201ENST00000429033 2259 ntBASIC3.54□□□□□ -1.84
SYPP08247 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SYPP08247 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SYPP08247 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SYPP08247 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.53□□□□□ -1.84
SYPP08247 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SYPP08247 RNU6-727P-201ENST00000363592 107 ntBASIC3.53□□□□□ -1.84
SYPP08247 SNORA18.3-201ENST00000384122 132 ntBASIC3.53□□□□□ -1.84
SYPP08247 MIR613-201ENST00000385248 95 ntBASIC3.53□□□□□ -1.84
SYPP08247 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SYPP08247 AL138878.1-201ENST00000405131 347 ntBASIC3.53□□□□□ -1.84
SYPP08247 RNU2-37P-201ENST00000410695 177 ntBASIC3.53□□□□□ -1.84
SYPP08247 RHEBP3-201ENST00000411920 351 ntBASIC3.53□□□□□ -1.84
SYPP08247 AC245291.1-201ENST00000419501 328 ntBASIC3.53□□□□□ -1.84
SYPP08247 AC024067.1-201ENST00000426199 223 ntBASIC3.53□□□□□ -1.84
SYPP08247 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.53□□□□□ -1.84
SYPP08247 AC115115.1-201ENST00000449927 248 ntBASIC3.53□□□□□ -1.84
SYPP08247 RN7SL93P-201ENST00000463035 293 ntBASIC3.53□□□□□ -1.84
SYPP08247 AC025518.1-201ENST00000479856 347 ntBASIC3.53□□□□□ -1.84
SYPP08247 AC103975.1-201ENST00000482506 483 ntBASIC3.53□□□□□ -1.84
SYPP08247 RPL30P14-201ENST00000482744 348 ntBASIC3.53□□□□□ -1.84
SYPP08247 RNA5SP208-201ENST00000516156 78 ntBASIC3.53□□□□□ -1.84
SYPP08247 RNU6-155P-201ENST00000516347 100 ntBASIC3.53□□□□□ -1.84
SYPP08247 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.53□□□□□ -1.84
SYPP08247 RPS15AP11-201ENST00000594193 385 ntBASIC3.53□□□□□ -1.84
SYPP08247 AC012493.2-201ENST00000595083 291 ntBASIC3.53□□□□□ -1.84
SYPP08247 SNRPGP20-201ENST00000604477 205 ntBASIC3.53□□□□□ -1.84
SYPP08247 AL034555.1-201ENST00000604816 211 ntBASIC3.53□□□□□ -1.84
SYPP08247 YPEL5P2-201ENST00000605553 359 ntBASIC3.53□□□□□ -1.84
SYPP08247 AC104465.1-201ENST00000611365 139 ntBASIC3.53□□□□□ -1.84
SYPP08247 MIR3674-201ENST00000636576 68 ntBASIC3.53□□□□□ -1.84
SYPP08247 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
SYPP08247 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SYPP08247 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SYPP08247 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.52□□□□□ -1.85
SYPP08247 RNU4-35P-201ENST00000362588 141 ntBASIC3.52□□□□□ -1.85
SYPP08247 Y_RNA.40-201ENST00000362645 93 ntBASIC3.52□□□□□ -1.85
SYPP08247 RNU6-529P-201ENST00000363383 104 ntBASIC3.52□□□□□ -1.85
SYPP08247 SNORD6-201ENST00000365444 73 ntBASIC3.52□□□□□ -1.85
SYPP08247 SNORD50.2-201ENST00000365465 70 ntBASIC3.52□□□□□ -1.85
SYPP08247 AL133475.1-201ENST00000404414 305 ntBASIC3.52□□□□□ -1.85
SYPP08247 MIR320B2-201ENST00000408479 138 ntBASIC3.52□□□□□ -1.85
SYPP08247 RNU6-1135P-201ENST00000411083 103 ntBASIC3.52□□□□□ -1.85
SYPP08247 AC009963.1-201ENST00000417265 157 ntBASIC3.52□□□□□ -1.85
SYPP08247 AC008011.1-201ENST00000545989 227 ntBASIC3.52□□□□□ -1.85
SYPP08247 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.52□□□□□ -1.85
SYPP08247 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.52□□□□□ -1.85
SYPP08247 DEFB117-201ENST00000602356 141 ntBASIC3.52□□□□□ -1.85
SYPP08247 AL162713.1-201ENST00000604480 262 ntBASIC3.52□□□□□ -1.85
SYPP08247 AC002076.2-201ENST00000617362 122 ntBASIC3.52□□□□□ -1.85
SYPP08247 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.52□□□□□ -1.85
SYPP08247 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SYPP08247 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
SYPP08247 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
SYPP08247 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
SYPP08247 RNU6-1010P-201ENST00000362757 107 ntBASIC3.51□□□□□ -1.85
SYPP08247 RNU6-1272P-201ENST00000362776 107 ntBASIC3.51□□□□□ -1.85
SYPP08247 RNU6-704P-201ENST00000364162 103 ntBASIC3.51□□□□□ -1.85
SYPP08247 Y_RNA.291-201ENST00000364886 113 ntBASIC3.51□□□□□ -1.85
SYPP08247 Y_RNA.398-201ENST00000383952 99 ntBASIC3.51□□□□□ -1.85
SYPP08247 Y_RNA.441-201ENST00000384123 112 ntBASIC3.51□□□□□ -1.85
SYPP08247 SNORA48.5-201ENST00000391143 135 ntBASIC3.51□□□□□ -1.85
SYPP08247 HMGN2P8-201ENST00000391458 268 ntBASIC3.51□□□□□ -1.85
SYPP08247 RNA5SP201-201ENST00000410316 124 ntBASIC3.51□□□□□ -1.85
SYPP08247 AL451074.5-201ENST00000415894 435 ntBASIC3.51□□□□□ -1.85
SYPP08247 AC096649.2-201ENST00000416186 393 ntBASIC3.51□□□□□ -1.85
SYPP08247 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.51□□□□□ -1.85
SYPP08247 AC006028.1-201ENST00000438379 402 ntBASIC3.51□□□□□ -1.85
SYPP08247 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms