Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AL031281.1-201ENST00000604049 488 ntBASIC0.54□□□□□ -2.32
TPM3P06753 GHRLOS.1-201ENST00000610995 70 ntBASIC0.54□□□□□ -2.32
TPM3P06753 AP000484.1-201ENST00000620067 1252 ntBASIC0.54□□□□□ -2.32
TPM3P06753 AC005858.4-201ENST00000623191 700 ntBASIC0.54□□□□□ -2.32
TPM3P06753 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.54□□□□□ -2.32
TPM3P06753 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
TPM3P06753 AC023934.1-201ENST00000574529 2389 ntBASIC0.53□□□□□ -2.32
TPM3P06753 RNU6-428P-201ENST00000362942 107 ntBASIC0.53□□□□□ -2.32
TPM3P06753 Y_RNA.302-201ENST00000364997 102 ntBASIC0.53□□□□□ -2.32
TPM3P06753 RNU4-12P-201ENST00000365233 139 ntBASIC0.53□□□□□ -2.32
TPM3P06753 SNORD115.1-201ENST00000391109 76 ntBASIC0.53□□□□□ -2.32
TPM3P06753 MIR1283-1-201ENST00000408494 87 ntBASIC0.53□□□□□ -2.32
TPM3P06753 RNU6-387P-201ENST00000411331 105 ntBASIC0.53□□□□□ -2.32
TPM3P06753 SNAP23P1-201ENST00000433229 246 ntBASIC0.53□□□□□ -2.32
TPM3P06753 HMGN2P34-201ENST00000437647 269 ntBASIC0.53□□□□□ -2.32
TPM3P06753 AC034244.1-201ENST00000507687 207 ntBASIC0.53□□□□□ -2.32
TPM3P06753 AC105185.1-201ENST00000518705 535 ntBASIC0.53□□□□□ -2.32
TPM3P06753 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.53□□□□□ -2.32
TPM3P06753 AC024995.1-201ENST00000523014 93 ntBASIC0.53□□□□□ -2.32
TPM3P06753 APOOP3-201ENST00000536787 586 ntBASIC0.53□□□□□ -2.32
TPM3P06753 AC008015.1-201ENST00000555505 465 ntBASIC0.53□□□□□ -2.32
TPM3P06753 RNU5E-10P-201ENST00000363506 118 ntBASIC0.52□□□□□ -2.33
TPM3P06753 RNU6-45P-201ENST00000384471 107 ntBASIC0.52□□□□□ -2.33
TPM3P06753 RPS29P13-201ENST00000402041 169 ntBASIC0.52□□□□□ -2.33
TPM3P06753 AC010154.1-201ENST00000425857 269 ntBASIC0.52□□□□□ -2.33
TPM3P06753 AC119618.1-201ENST00000434191 222 ntBASIC0.52□□□□□ -2.33
TPM3P06753 SRRM1P2-201ENST00000464531 1192 ntBASIC0.52□□□□□ -2.33
TPM3P06753 RPS26P48-201ENST00000491713 339 ntBASIC0.52□□□□□ -2.33
TPM3P06753 AC010587.1-201ENST00000505809 469 ntBASIC0.52□□□□□ -2.33
TPM3P06753 SNORA31.10-201ENST00000516482 106 ntBASIC0.52□□□□□ -2.33
TPM3P06753 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.52□□□□□ -2.33
TPM3P06753 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.52□□□□□ -2.33
TPM3P06753 AC064807.4-201ENST00000607201 407 ntBASIC0.52□□□□□ -2.33
TPM3P06753 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.52□□□□□ -2.33
TPM3P06753 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.52□□□□□ -2.33
TPM3P06753 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
TPM3P06753 AC009541.1-201ENST00000438279 2662 ntBASIC0.52□□□□□ -2.33
TPM3P06753 RNU6-562P-201ENST00000362731 107 ntBASIC0.51□□□□□ -2.33
TPM3P06753 RNU4-92P-201ENST00000363783 136 ntBASIC0.51□□□□□ -2.33
TPM3P06753 RNU6-1235P-201ENST00000384559 107 ntBASIC0.51□□□□□ -2.33
TPM3P06753 MIR208B-201ENST00000401172 77 ntBASIC0.51□□□□□ -2.33
TPM3P06753 Y_RNA.595-201ENST00000410403 105 ntBASIC0.51□□□□□ -2.33
TPM3P06753 AC007283.2-201ENST00000424739 197 ntBASIC0.51□□□□□ -2.33
TPM3P06753 RPL37P21-201ENST00000435890 276 ntBASIC0.51□□□□□ -2.33
TPM3P06753 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC0.51□□□□□ -2.33
TPM3P06753 RNU6-498P-201ENST00000459468 107 ntBASIC0.51□□□□□ -2.33
TPM3P06753 AC104982.1-201ENST00000478775 574 ntBASIC0.51□□□□□ -2.33
TPM3P06753 AC098869.1-201ENST00000481627 292 ntBASIC0.51□□□□□ -2.33
TPM3P06753 AC005840.1-201ENST00000498412 377 ntBASIC0.51□□□□□ -2.33
TPM3P06753 RNU6-1146P-201ENST00000516282 102 ntBASIC0.51□□□□□ -2.33
TPM3P06753 AC011604.1-201ENST00000545978 196 ntBASIC0.51□□□□□ -2.33
TPM3P06753 CYP3A137P-201ENST00000562436 69 ntBASIC0.51□□□□□ -2.33
TPM3P06753 AL390123.1-201ENST00000603216 237 ntBASIC0.51□□□□□ -2.33
TPM3P06753 AP001596.2-201ENST00000608410 312 ntBASIC0.51□□□□□ -2.33
TPM3P06753 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
TPM3P06753 Y_RNA.22-201ENST00000362492 102 ntBASIC0.5□□□□□ -2.33
TPM3P06753 RNU6-931P-201ENST00000363850 107 ntBASIC0.5□□□□□ -2.33
TPM3P06753 AL606517.2-201ENST00000442855 241 ntBASIC0.5□□□□□ -2.33
TPM3P06753 AL162395.1-201ENST00000457882 422 ntBASIC0.5□□□□□ -2.33
TPM3P06753 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.5□□□□□ -2.33
TPM3P06753 AC112204.1-201ENST00000502591 103 ntBASIC0.5□□□□□ -2.33
TPM3P06753 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.5□□□□□ -2.33
TPM3P06753 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.5□□□□□ -2.33
TPM3P06753 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.5□□□□□ -2.33
TPM3P06753 MIR4753-201ENST00000585119 83 ntBASIC0.5□□□□□ -2.33
TPM3P06753 Z99289.3-201ENST00000605586 594 ntBASIC0.5□□□□□ -2.33
TPM3P06753 AL136221.1-201ENST00000621449 509 ntBASIC0.5□□□□□ -2.33
TPM3P06753 SNORD18A-201ENST00000363753 72 ntBASIC0.49□□□□□ -2.33
TPM3P06753 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.49□□□□□ -2.33
TPM3P06753 RPS27AP14-201ENST00000422868 454 ntBASIC0.49□□□□□ -2.33
TPM3P06753 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.49□□□□□ -2.33
TPM3P06753 AC104136.1-201ENST00000512969 394 ntBASIC0.49□□□□□ -2.33
TPM3P06753 RNU6-948P-201ENST00000516374 107 ntBASIC0.49□□□□□ -2.33
TPM3P06753 AC091489.2-201ENST00000566263 604 ntBASIC0.49□□□□□ -2.33
TPM3P06753 AC116165.2-201ENST00000616705 206 ntBASIC0.49□□□□□ -2.33
TPM3P06753 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.49□□□□□ -2.33
TPM3P06753 AC106754.2-201ENST00000623006 233 ntBASIC0.49□□□□□ -2.33
TPM3P06753 RNU6-179P-201ENST00000363350 107 ntBASIC0.48□□□□□ -2.33
TPM3P06753 RNU4-68P-201ENST00000364314 141 ntBASIC0.48□□□□□ -2.33
TPM3P06753 RNU6-417P-201ENST00000384712 107 ntBASIC0.48□□□□□ -2.33
TPM3P06753 MIR10B-201ENST00000385011 110 ntBASIC0.48□□□□□ -2.33
TPM3P06753 RN7SKP200-201ENST00000410564 320 ntBASIC0.48□□□□□ -2.33
TPM3P06753 AC114737.2-201ENST00000421583 173 ntBASIC0.48□□□□□ -2.33
TPM3P06753 AL035398.1-201ENST00000430869 322 ntBASIC0.48□□□□□ -2.33
TPM3P06753 AC008628.2-201ENST00000502605 298 ntBASIC0.48□□□□□ -2.33
TPM3P06753 DEFB131C-201ENST00000528817 165 ntBASIC0.48□□□□□ -2.33
TPM3P06753 AC008250.2-201ENST00000615261 205 ntBASIC0.48□□□□□ -2.33
TPM3P06753 AC013437.2-201ENST00000639587 677 ntBASIC0.48□□□□□ -2.33
TPM3P06753 Y_RNA.287-201ENST00000364853 94 ntBASIC0.47□□□□□ -2.33
TPM3P06753 SNORA36A-201ENST00000384221 132 ntBASIC0.47□□□□□ -2.33
TPM3P06753 Y_RNA.504-201ENST00000384481 104 ntBASIC0.47□□□□□ -2.33
TPM3P06753 SNORD41-201ENST00000386967 70 ntBASIC0.47□□□□□ -2.33
TPM3P06753 RNU6-1000P-201ENST00000391066 106 ntBASIC0.47□□□□□ -2.33
TPM3P06753 ELOCP4-201ENST00000420090 333 ntBASIC0.47□□□□□ -2.33
TPM3P06753 TIMM9P3-201ENST00000428659 274 ntBASIC0.47□□□□□ -2.33
TPM3P06753 MTND1P20-201ENST00000430341 950 ntBASIC0.47□□□□□ -2.33
TPM3P06753 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.47□□□□□ -2.33
TPM3P06753 AC016717.1-201ENST00000448918 286 ntBASIC0.47□□□□□ -2.33
TPM3P06753 AC091874.1-201ENST00000511402 339 ntBASIC0.47□□□□□ -2.33
TPM3P06753 AC108729.3-201ENST00000513484 108 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 158.2 ms