Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 RNU4-71P-201ENST00000516258 113 ntBASIC3.47□□□□□ -1.85
CHGBP05060 AL137100.2-201ENST00000555786 315 ntBASIC3.47□□□□□ -1.85
CHGBP05060 MIR4643-201ENST00000577473 78 ntBASIC3.47□□□□□ -1.85
CHGBP05060 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.47□□□□□ -1.85
CHGBP05060 AC093732.2-201ENST00000607950 274 ntBASIC3.47□□□□□ -1.85
CHGBP05060 AC004792.1-201ENST00000614523 137 ntBASIC3.47□□□□□ -1.85
CHGBP05060 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CHGBP05060 FAM35BP-202ENST00000497389 3337 ntBASIC3.47□□□□□ -1.85
CHGBP05060 AC135776.4-201ENST00000624300 1904 ntBASIC3.46□□□□□ -1.85
CHGBP05060 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.85
CHGBP05060 Y_RNA.200-201ENST00000364018 102 ntBASIC3.46□□□□□ -1.86
CHGBP05060 SNORA14A-201ENST00000364773 135 ntBASIC3.46□□□□□ -1.86
CHGBP05060 SNORD32A-201ENST00000364805 84 ntBASIC3.46□□□□□ -1.86
CHGBP05060 Y_RNA.286-201ENST00000364813 102 ntBASIC3.46□□□□□ -1.86
CHGBP05060 RNU6-142P-201ENST00000384019 107 ntBASIC3.46□□□□□ -1.86
CHGBP05060 MIR181A2-201ENST00000384863 110 ntBASIC3.46□□□□□ -1.86
CHGBP05060 RNA5SP252-201ENST00000391131 119 ntBASIC3.46□□□□□ -1.86
CHGBP05060 AL033519.2-201ENST00000403958 392 ntBASIC3.46□□□□□ -1.86
CHGBP05060 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.46□□□□□ -1.86
CHGBP05060 AC022018.1-201ENST00000430685 241 ntBASIC3.46□□□□□ -1.86
CHGBP05060 AC009969.1-201ENST00000438726 172 ntBASIC3.46□□□□□ -1.86
CHGBP05060 AC107083.1-201ENST00000439643 279 ntBASIC3.46□□□□□ -1.86
CHGBP05060 AC108938.1-201ENST00000451204 136 ntBASIC3.46□□□□□ -1.86
CHGBP05060 RPL26P9-201ENST00000457466 433 ntBASIC3.46□□□□□ -1.86
CHGBP05060 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.46□□□□□ -1.86
CHGBP05060 AC006445.2-201ENST00000510061 472 ntBASIC3.46□□□□□ -1.86
CHGBP05060 RNU6-1114P-201ENST00000516022 107 ntBASIC3.46□□□□□ -1.86
CHGBP05060 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.46□□□□□ -1.86
CHGBP05060 SNORA43.4-201ENST00000629559 138 ntBASIC3.46□□□□□ -1.86
CHGBP05060 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.46□□□□□ -1.86
CHGBP05060 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CHGBP05060 AC000403.1-201ENST00000613696 3585 ntBASIC3.46□□□□□ -1.86
CHGBP05060 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CHGBP05060 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHGBP05060 ADAM3A-203ENST00000461344 2157 ntBASIC3.45□□□□□ -1.86
CHGBP05060 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHGBP05060 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHGBP05060 MAPK10-362ENST00000641864 4484 ntBASIC3.45□□□□□ -1.86
CHGBP05060 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.45□□□□□ -1.86
CHGBP05060 RNU1-112P-201ENST00000364401 164 ntBASIC3.45□□□□□ -1.86
CHGBP05060 Y_RNA.319-201ENST00000365138 92 ntBASIC3.45□□□□□ -1.86
CHGBP05060 RNU6-290P-201ENST00000365212 101 ntBASIC3.45□□□□□ -1.86
CHGBP05060 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CHGBP05060 Y_RNA.785-201ENST00000384290 109 ntBASIC3.45□□□□□ -1.86
CHGBP05060 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CHGBP05060 SNORA48.8-201ENST00000391324 134 ntBASIC3.45□□□□□ -1.86
CHGBP05060 MIR1298-201ENST00000408783 112 ntBASIC3.45□□□□□ -1.86
CHGBP05060 RNA5SP274-201ENST00000410484 108 ntBASIC3.45□□□□□ -1.86
CHGBP05060 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.45□□□□□ -1.86
CHGBP05060 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.45□□□□□ -1.86
CHGBP05060 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.45□□□□□ -1.86
CHGBP05060 AC005002.2-201ENST00000438228 269 ntBASIC3.45□□□□□ -1.86
CHGBP05060 HSPE1P25-201ENST00000455484 251 ntBASIC3.45□□□□□ -1.86
CHGBP05060 RPL30P12-201ENST00000474666 353 ntBASIC3.45□□□□□ -1.86
CHGBP05060 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.45□□□□□ -1.86
CHGBP05060 AC091826.1-201ENST00000514065 313 ntBASIC3.45□□□□□ -1.86
CHGBP05060 RNU7-110P-201ENST00000516891 62 ntBASIC3.45□□□□□ -1.86
CHGBP05060 LARP7P3-201ENST00000579888 337 ntBASIC3.45□□□□□ -1.86
CHGBP05060 U2.14-201ENST00000615943 113 ntBASIC3.45□□□□□ -1.86
CHGBP05060 AL138880.2-201ENST00000616214 239 ntBASIC3.45□□□□□ -1.86
CHGBP05060 MIR6134-201ENST00000617606 109 ntBASIC3.45□□□□□ -1.86
CHGBP05060 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.45□□□□□ -1.86
CHGBP05060 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.45□□□□□ -1.86
CHGBP05060 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHGBP05060 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CHGBP05060 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.44□□□□□ -1.86
CHGBP05060 RNU4-90P-201ENST00000362773 141 ntBASIC3.44□□□□□ -1.86
CHGBP05060 RNU1-35P-201ENST00000362782 153 ntBASIC3.44□□□□□ -1.86
CHGBP05060 RNU6-774P-201ENST00000363238 107 ntBASIC3.44□□□□□ -1.86
CHGBP05060 SNORD115-32-201ENST00000364079 82 ntBASIC3.44□□□□□ -1.86
CHGBP05060 MIR181B1-201ENST00000385240 110 ntBASIC3.44□□□□□ -1.86
CHGBP05060 Y_RNA.793-201ENST00000411222 111 ntBASIC3.44□□□□□ -1.86
CHGBP05060 RNU6-1001P-201ENST00000411265 100 ntBASIC3.44□□□□□ -1.86
CHGBP05060 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.44□□□□□ -1.86
CHGBP05060 AP004217.1-201ENST00000480579 346 ntBASIC3.44□□□□□ -1.86
CHGBP05060 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.44□□□□□ -1.86
CHGBP05060 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.44□□□□□ -1.86
CHGBP05060 SNORA50A-202ENST00000629536 136 ntBASIC3.44□□□□□ -1.86
CHGBP05060 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CHGBP05060 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHGBP05060 AC103988.1-201ENST00000566382 2177 ntBASIC3.44□□□□□ -1.86
CHGBP05060 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CHGBP05060 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CHGBP05060 Y_RNA.83-201ENST00000363005 113 ntBASIC3.43□□□□□ -1.86
CHGBP05060 RNU6-21P-201ENST00000384710 107 ntBASIC3.43□□□□□ -1.86
CHGBP05060 RNU1-139P-201ENST00000391307 165 ntBASIC3.43□□□□□ -1.86
CHGBP05060 MIR888-201ENST00000401186 77 ntBASIC3.43□□□□□ -1.86
CHGBP05060 COTL1P1-201ENST00000422309 375 ntBASIC3.43□□□□□ -1.86
CHGBP05060 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.43□□□□□ -1.86
CHGBP05060 AC007969.2-201ENST00000441891 191 ntBASIC3.43□□□□□ -1.86
CHGBP05060 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.43□□□□□ -1.86
CHGBP05060 RN7SKP43-201ENST00000516173 320 ntBASIC3.43□□□□□ -1.86
CHGBP05060 AC024405.2-202ENST00000532731 184 ntBASIC3.43□□□□□ -1.86
CHGBP05060 AC027288.2-201ENST00000553028 243 ntBASIC3.43□□□□□ -1.86
CHGBP05060 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.43□□□□□ -1.86
CHGBP05060 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.43□□□□□ -1.86
CHGBP05060 AL359198.2-201ENST00000611836 194 ntBASIC3.43□□□□□ -1.86
CHGBP05060 FTX_2.1-201ENST00000618816 94 ntBASIC3.43□□□□□ -1.86
CHGBP05060 AC073308.1-201ENST00000623696 305 ntBASIC3.43□□□□□ -1.86
CHGBP05060 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms