Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PDGFAP04085 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PDGFAP04085 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PDGFAP04085 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PDGFAP04085 AC000403.1-201ENST00000613696 3585 ntBASIC3.83□□□□□ -1.8
PDGFAP04085 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.83□□□□□ -1.8
PDGFAP04085 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
PDGFAP04085 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PDGFAP04085 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
PDGFAP04085 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.82□□□□□ -1.8
PDGFAP04085 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDGFAP04085 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PDGFAP04085 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDGFAP04085 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PDGFAP04085 Y_RNA.310-201ENST00000365063 113 ntBASIC3.82□□□□□ -1.8
PDGFAP04085 AP002088.1-201ENST00000382740 395 ntBASIC3.82□□□□□ -1.8
PDGFAP04085 RNU6-1083P-201ENST00000384022 107 ntBASIC3.82□□□□□ -1.8
PDGFAP04085 RNU6-1117P-201ENST00000384525 104 ntBASIC3.82□□□□□ -1.8
PDGFAP04085 RNU6-239P-201ENST00000390990 99 ntBASIC3.82□□□□□ -1.8
PDGFAP04085 CR769767.1-201ENST00000436337 346 ntBASIC3.82□□□□□ -1.8
PDGFAP04085 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.82□□□□□ -1.8
PDGFAP04085 RPS29P19-201ENST00000479709 171 ntBASIC3.82□□□□□ -1.8
PDGFAP04085 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.82□□□□□ -1.8
PDGFAP04085 RNU6-1098P-201ENST00000516772 96 ntBASIC3.82□□□□□ -1.8
PDGFAP04085 RNU6-711P-201ENST00000517255 106 ntBASIC3.82□□□□□ -1.8
PDGFAP04085 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.82□□□□□ -1.8
PDGFAP04085 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.82□□□□□ -1.8
PDGFAP04085 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDGFAP04085 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.82□□□□□ -1.8
PDGFAP04085 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
PDGFAP04085 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
PDGFAP04085 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDGFAP04085 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDGFAP04085 RNU6-486P-201ENST00000363116 107 ntBASIC3.81□□□□□ -1.8
PDGFAP04085 RNU6-1048P-201ENST00000364054 107 ntBASIC3.81□□□□□ -1.8
PDGFAP04085 SNORA51.4-201ENST00000364993 124 ntBASIC3.81□□□□□ -1.8
PDGFAP04085 RNU6-578P-201ENST00000390980 103 ntBASIC3.81□□□□□ -1.8
PDGFAP04085 HMGN2P8-201ENST00000391458 268 ntBASIC3.81□□□□□ -1.8
PDGFAP04085 MIR300-201ENST00000401138 83 ntBASIC3.81□□□□□ -1.8
PDGFAP04085 MIR1185-2-201ENST00000408687 86 ntBASIC3.81□□□□□ -1.8
PDGFAP04085 MIR1911-201ENST00000410783 80 ntBASIC3.81□□□□□ -1.8
PDGFAP04085 TBCAP1-201ENST00000436520 327 ntBASIC3.81□□□□□ -1.8
PDGFAP04085 HMGN2P9-201ENST00000476875 229 ntBASIC3.81□□□□□ -1.8
PDGFAP04085 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.81□□□□□ -1.8
PDGFAP04085 AC006064.5-201ENST00000541782 248 ntBASIC3.81□□□□□ -1.8
PDGFAP04085 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.81□□□□□ -1.8
PDGFAP04085 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.81□□□□□ -1.8
PDGFAP04085 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.81□□□□□ -1.8
PDGFAP04085 AL161756.2-201ENST00000604597 246 ntBASIC3.81□□□□□ -1.8
PDGFAP04085 AC025754.2-201ENST00000606491 432 ntBASIC3.81□□□□□ -1.8
PDGFAP04085 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.81□□□□□ -1.8
PDGFAP04085 AC091895.1-201ENST00000624494 256 ntBASIC3.81□□□□□ -1.8
PDGFAP04085 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.81□□□□□ -1.8
PDGFAP04085 MAPK10-372ENST00000641954 3413 ntBASIC3.81□□□□□ -1.8
PDGFAP04085 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PDGFAP04085 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PDGFAP04085 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.8□□□□□ -1.8
PDGFAP04085 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PDGFAP04085 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PDGFAP04085 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.8□□□□□ -1.8
PDGFAP04085 SNORD114-7-201ENST00000362520 77 ntBASIC3.8□□□□□ -1.8
PDGFAP04085 RNU6-1205P-201ENST00000363625 106 ntBASIC3.8□□□□□ -1.8
PDGFAP04085 Y_RNA.215-201ENST00000364204 112 ntBASIC3.8□□□□□ -1.8
PDGFAP04085 SNORA14A-201ENST00000364773 135 ntBASIC3.8□□□□□ -1.8
PDGFAP04085 SNORD66.1-201ENST00000391230 76 ntBASIC3.8□□□□□ -1.8
PDGFAP04085 AL159169.1-201ENST00000421119 127 ntBASIC3.8□□□□□ -1.8
PDGFAP04085 AL691449.1-201ENST00000426570 421 ntBASIC3.8□□□□□ -1.8
PDGFAP04085 AL162725.1-201ENST00000435405 301 ntBASIC3.8□□□□□ -1.8
PDGFAP04085 PRSS3P4-201ENST00000453323 162 ntBASIC3.8□□□□□ -1.8
PDGFAP04085 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.8□□□□□ -1.8
PDGFAP04085 AC114982.1-201ENST00000469402 321 ntBASIC3.8□□□□□ -1.8
PDGFAP04085 AL049830.2-201ENST00000480072 201 ntBASIC3.8□□□□□ -1.8
PDGFAP04085 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.8□□□□□ -1.8
PDGFAP04085 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.8□□□□□ -1.8
PDGFAP04085 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.8□□□□□ -1.8
PDGFAP04085 MIR4431-201ENST00000579990 94 ntBASIC3.8□□□□□ -1.8
PDGFAP04085 AC099778.2-201ENST00000610904 211 ntBASIC3.8□□□□□ -1.8
PDGFAP04085 U7.8-201ENST00000619968 63 ntBASIC3.8□□□□□ -1.8
PDGFAP04085 Y_RNA.778-201ENST00000620203 90 ntBASIC3.8□□□□□ -1.8
PDGFAP04085 AL354798.1-201ENST00000622505 329 ntBASIC3.8□□□□□ -1.8
PDGFAP04085 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.8□□□□□ -1.8
PDGFAP04085 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDGFAP04085 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PDGFAP04085 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.8□□□□□ -1.8
PDGFAP04085 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
PDGFAP04085 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PDGFAP04085 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.79□□□□□ -1.8
PDGFAP04085 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PDGFAP04085 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PDGFAP04085 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.79□□□□□ -1.8
PDGFAP04085 RNU4-10P-201ENST00000364383 140 ntBASIC3.79□□□□□ -1.8
PDGFAP04085 RNU1-44P-201ENST00000384453 163 ntBASIC3.79□□□□□ -1.8
PDGFAP04085 Y_RNA.568-201ENST00000384742 113 ntBASIC3.79□□□□□ -1.8
PDGFAP04085 MIR526A2-201ENST00000390198 65 ntBASIC3.79□□□□□ -1.8
PDGFAP04085 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PDGFAP04085 MIR1294-201ENST00000408503 142 ntBASIC3.79□□□□□ -1.8
PDGFAP04085 AC017083.1-201ENST00000428093 483 ntBASIC3.79□□□□□ -1.8
PDGFAP04085 RPL23AP83-201ENST00000434984 473 ntBASIC3.79□□□□□ -1.8
PDGFAP04085 RPL23AP46-201ENST00000438548 490 ntBASIC3.79□□□□□ -1.8
PDGFAP04085 MIR5688-201ENST00000580619 83 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms