Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 RPL9P9-202ENST00000466501 579 ntBASIC1.14□□□□□ -2.23
MT-ND4P03905 AL163973.1-201ENST00000484753 577 ntBASIC1.14□□□□□ -2.23
MT-ND4P03905 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.14□□□□□ -2.23
MT-ND4P03905 RNU6-548P-201ENST00000517083 115 ntBASIC1.14□□□□□ -2.23
MT-ND4P03905 AC090821.2-201ENST00000523552 176 ntBASIC1.14□□□□□ -2.23
MT-ND4P03905 MTND4P7-201ENST00000523876 130 ntBASIC1.14□□□□□ -2.23
MT-ND4P03905 DEFB131C-201ENST00000528817 165 ntBASIC1.14□□□□□ -2.23
MT-ND4P03905 AP003034.1-201ENST00000534621 422 ntBASIC1.14□□□□□ -2.23
MT-ND4P03905 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.14□□□□□ -2.23
MT-ND4P03905 MIR4424-201ENST00000585257 86 ntBASIC1.14□□□□□ -2.23
MT-ND4P03905 AC004223.2-201ENST00000590309 544 ntBASIC1.14□□□□□ -2.23
MT-ND4P03905 AC083806.3-201ENST00000614016 455 ntBASIC1.14□□□□□ -2.23
MT-ND4P03905 AL159152.1-201ENST00000635019 2587 ntBASIC1.14□□□□□ -2.23
MT-ND4P03905 ZNF72P-201ENST00000425869 1908 ntBASIC1.13□□□□□ -2.23
MT-ND4P03905 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
MT-ND4P03905 RNU6-862P-201ENST00000362804 105 ntBASIC1.13□□□□□ -2.23
MT-ND4P03905 AL606923.1-201ENST00000406616 190 ntBASIC1.13□□□□□ -2.23
MT-ND4P03905 AC073464.1-201ENST00000429823 534 ntBASIC1.13□□□□□ -2.23
MT-ND4P03905 UBE2V1P8-201ENST00000437166 265 ntBASIC1.13□□□□□ -2.23
MT-ND4P03905 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.13□□□□□ -2.23
MT-ND4P03905 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.13□□□□□ -2.23
MT-ND4P03905 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.13□□□□□ -2.23
MT-ND4P03905 snoU13.6-201ENST00000458785 104 ntBASIC1.13□□□□□ -2.23
MT-ND4P03905 snoU13.9-201ENST00000458927 103 ntBASIC1.13□□□□□ -2.23
MT-ND4P03905 RPS23P5-201ENST00000495419 428 ntBASIC1.13□□□□□ -2.23
MT-ND4P03905 SNORA14.1-201ENST00000516113 141 ntBASIC1.13□□□□□ -2.23
MT-ND4P03905 RNA5SP437-201ENST00000517249 129 ntBASIC1.13□□□□□ -2.23
MT-ND4P03905 RNU6-323P-201ENST00000521915 107 ntBASIC1.13□□□□□ -2.23
MT-ND4P03905 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.13□□□□□ -2.23
MT-ND4P03905 SNORA77B-201ENST00000578179 125 ntBASIC1.13□□□□□ -2.23
MT-ND4P03905 AC064807.4-201ENST00000607201 407 ntBASIC1.13□□□□□ -2.23
MT-ND4P03905 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.13□□□□□ -2.23
MT-ND4P03905 AC009541.1-201ENST00000438279 2662 ntBASIC1.13□□□□□ -2.23
MT-ND4P03905 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
MT-ND4P03905 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.13□□□□□ -2.23
MT-ND4P03905 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
MT-ND4P03905 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.12□□□□□ -2.23
MT-ND4P03905 RNU6-545P-201ENST00000362681 104 ntBASIC1.12□□□□□ -2.23
MT-ND4P03905 SNORA18.2-201ENST00000383865 132 ntBASIC1.12□□□□□ -2.23
MT-ND4P03905 RNU6-1026P-201ENST00000384465 108 ntBASIC1.12□□□□□ -2.23
MT-ND4P03905 RNU6-1093P-201ENST00000391194 107 ntBASIC1.12□□□□□ -2.23
MT-ND4P03905 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.12□□□□□ -2.23
MT-ND4P03905 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.12□□□□□ -2.23
MT-ND4P03905 C8orf59P1-201ENST00000429930 303 ntBASIC1.12□□□□□ -2.23
MT-ND4P03905 AC245047.4-201ENST00000433189 144 ntBASIC1.12□□□□□ -2.23
MT-ND4P03905 USP9YP28-201ENST00000435142 589 ntBASIC1.12□□□□□ -2.23
MT-ND4P03905 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.12□□□□□ -2.23
MT-ND4P03905 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.12□□□□□ -2.23
MT-ND4P03905 HSPE1P9-201ENST00000440046 311 ntBASIC1.12□□□□□ -2.23
MT-ND4P03905 AC007395.1-201ENST00000451333 677 ntBASIC1.12□□□□□ -2.23
MT-ND4P03905 ATP5J2P3-201ENST00000451550 258 ntBASIC1.12□□□□□ -2.23
MT-ND4P03905 MTCO2P18-201ENST00000457151 658 ntBASIC1.12□□□□□ -2.23
MT-ND4P03905 RNU6-956P-201ENST00000458868 103 ntBASIC1.12□□□□□ -2.23
MT-ND4P03905 snoU13.30-201ENST00000458951 104 ntBASIC1.12□□□□□ -2.23
MT-ND4P03905 RPS29P27-201ENST00000463711 170 ntBASIC1.12□□□□□ -2.23
MT-ND4P03905 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.12□□□□□ -2.23
MT-ND4P03905 AC091435.1-201ENST00000505442 584 ntBASIC1.12□□□□□ -2.23
MT-ND4P03905 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.12□□□□□ -2.23
MT-ND4P03905 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
MT-ND4P03905 AC010493.1-201ENST00000513479 292 ntBASIC1.12□□□□□ -2.23
MT-ND4P03905 RNU6-612P-201ENST00000516909 102 ntBASIC1.12□□□□□ -2.23
MT-ND4P03905 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
MT-ND4P03905 HMGB1P33-201ENST00000563485 527 ntBASIC1.12□□□□□ -2.23
MT-ND4P03905 AC073648.5-201ENST00000603502 305 ntBASIC1.12□□□□□ -2.23
MT-ND4P03905 CTHRC1P1-201ENST00000605383 469 ntBASIC1.12□□□□□ -2.23
MT-ND4P03905 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.12□□□□□ -2.23
MT-ND4P03905 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.12□□□□□ -2.23
MT-ND4P03905 AL136221.1-201ENST00000621449 509 ntBASIC1.12□□□□□ -2.23
MT-ND4P03905 AP000770.2-201ENST00000623694 100 ntBASIC1.12□□□□□ -2.23
MT-ND4P03905 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
MT-ND4P03905 RNU6-414P-201ENST00000363705 104 ntBASIC1.11□□□□□ -2.23
MT-ND4P03905 RNU6-271P-201ENST00000363858 105 ntBASIC1.11□□□□□ -2.23
MT-ND4P03905 Y_RNA.255-201ENST00000364581 97 ntBASIC1.11□□□□□ -2.23
MT-ND4P03905 RNU6-939P-201ENST00000384634 107 ntBASIC1.11□□□□□ -2.23
MT-ND4P03905 MIR548B-201ENST00000385247 97 ntBASIC1.11□□□□□ -2.23
MT-ND4P03905 MIR1267-201ENST00000408723 78 ntBASIC1.11□□□□□ -2.23
MT-ND4P03905 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.11□□□□□ -2.23
MT-ND4P03905 AL606489.2-201ENST00000433886 234 ntBASIC1.11□□□□□ -2.23
MT-ND4P03905 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.11□□□□□ -2.23
MT-ND4P03905 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.11□□□□□ -2.23
MT-ND4P03905 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.11□□□□□ -2.23
MT-ND4P03905 RPL26P26-201ENST00000480251 434 ntBASIC1.11□□□□□ -2.23
MT-ND4P03905 HMGN1P13-201ENST00000505795 138 ntBASIC1.11□□□□□ -2.23
MT-ND4P03905 RN7SKP179-201ENST00000516126 217 ntBASIC1.11□□□□□ -2.23
MT-ND4P03905 RNU6-1038P-201ENST00000516516 104 ntBASIC1.11□□□□□ -2.23
MT-ND4P03905 RNU6-902P-201ENST00000517212 91 ntBASIC1.11□□□□□ -2.23
MT-ND4P03905 AP003033.1-201ENST00000527244 415 ntBASIC1.11□□□□□ -2.23
MT-ND4P03905 AC007834.2-201ENST00000536310 343 ntBASIC1.11□□□□□ -2.23
MT-ND4P03905 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.11□□□□□ -2.23
MT-ND4P03905 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.11□□□□□ -2.23
MT-ND4P03905 MIR4303-201ENST00000581299 66 ntBASIC1.11□□□□□ -2.23
MT-ND4P03905 AC087683.1-201ENST00000591187 441 ntBASIC1.11□□□□□ -2.23
MT-ND4P03905 AC119751.7-201ENST00000600494 245 ntBASIC1.11□□□□□ -2.23
MT-ND4P03905 AC069114.2-201ENST00000604699 304 ntBASIC1.11□□□□□ -2.23
MT-ND4P03905 RPL17P51-201ENST00000605218 238 ntBASIC1.11□□□□□ -2.23
MT-ND4P03905 AC064836.2-201ENST00000609491 462 ntBASIC1.11□□□□□ -2.23
MT-ND4P03905 AC007684.1-201ENST00000609671 477 ntBASIC1.11□□□□□ -2.23
MT-ND4P03905 AC008147.4-201ENST00000617570 1204 ntBASIC1.11□□□□□ -2.23
MT-ND4P03905 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
MT-ND4P03905 Z69908.1-201ENST00000622603 247 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms