Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 MED28P2-201ENST00000475771 317 ntBASIC0.85□□□□□ -2.27
COL4A1P02462 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.85□□□□□ -2.27
COL4A1P02462 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.85□□□□□ -2.27
COL4A1P02462 SCARNA24.1-201ENST00000516465 137 ntBASIC0.85□□□□□ -2.27
COL4A1P02462 RN7SKP256-201ENST00000517201 314 ntBASIC0.85□□□□□ -2.27
COL4A1P02462 MTCO2P4-201ENST00000517968 247 ntBASIC0.85□□□□□ -2.27
COL4A1P02462 AP001893.2-201ENST00000526949 202 ntBASIC0.85□□□□□ -2.27
COL4A1P02462 AC133485.1-201ENST00000567176 124 ntBASIC0.85□□□□□ -2.27
COL4A1P02462 AC138907.6-201ENST00000568401 126 ntBASIC0.85□□□□□ -2.27
COL4A1P02462 AC087683.1-201ENST00000591187 441 ntBASIC0.85□□□□□ -2.27
COL4A1P02462 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.85□□□□□ -2.27
COL4A1P02462 AC004908.3-201ENST00000610248 625 ntBASIC0.85□□□□□ -2.27
COL4A1P02462 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
COL4A1P02462 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.85□□□□□ -2.27
COL4A1P02462 AC063943.3-201ENST00000615562 356 ntBASIC0.85□□□□□ -2.27
COL4A1P02462 AC099842.1-201ENST00000619919 596 ntBASIC0.85□□□□□ -2.27
COL4A1P02462 AC078883.4-201ENST00000623218 367 ntBASIC0.85□□□□□ -2.27
COL4A1P02462 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.85□□□□□ -2.27
COL4A1P02462 FGF7P2-201ENST00000332473 296 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 RNU4-21P-201ENST00000362802 126 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 RNU6-1120P-201ENST00000362988 108 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 RNU6-105P-201ENST00000363909 104 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 RNU6-26P-201ENST00000383985 107 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 RNU6-142P-201ENST00000384019 107 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 SNORD26-201ENST00000384147 75 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 RNU6-43P-201ENST00000384302 107 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.84□□□□□ -2.27
COL4A1P02462 AC092447.3-201ENST00000426027 686 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 MTCO2P11-201ENST00000431069 680 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 AC000111.3-201ENST00000433478 193 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.84□□□□□ -2.27
COL4A1P02462 AL031667.1-201ENST00000440222 725 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.84□□□□□ -2.27
COL4A1P02462 USP9YP29-201ENST00000445112 563 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.84□□□□□ -2.27
COL4A1P02462 HMGB1P35-201ENST00000503360 598 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 AC079140.5-201ENST00000507882 310 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.84□□□□□ -2.27
COL4A1P02462 PTP4A1P4-201ENST00000512479 322 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 SNORA25.17-201ENST00000517184 124 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.84□□□□□ -2.27
COL4A1P02462 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.84□□□□□ -2.27
COL4A1P02462 AC023050.3-201ENST00000541142 333 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.84□□□□□ -2.27
COL4A1P02462 AC145350.1-201ENST00000567426 208 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.84□□□□□ -2.27
COL4A1P02462 RSL24D1P11-201ENST00000591045 491 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 AL136363.2-201ENST00000604173 851 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 AL356157.2-201ENST00000605122 111 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 AC092354.1-201ENST00000606057 376 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 AC093788.1-201ENST00000609356 927 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 AC136475.10-201ENST00000620253 385 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 MIR1248-201ENST00000629190 106 ntBASIC0.84□□□□□ -2.27
COL4A1P02462 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
COL4A1P02462 RNU6-611P-201ENST00000384276 104 ntBASIC0.84□□□□□ -2.28
COL4A1P02462 RNU6-517P-201ENST00000384362 110 ntBASIC0.84□□□□□ -2.28
COL4A1P02462 RNU6-45P-201ENST00000384471 107 ntBASIC0.84□□□□□ -2.28
COL4A1P02462 RNU6-692P-201ENST00000384496 107 ntBASIC0.84□□□□□ -2.28
COL4A1P02462 MIR518A2-201ENST00000384966 87 ntBASIC0.84□□□□□ -2.28
COL4A1P02462 RPS29P13-201ENST00000402041 169 ntBASIC0.84□□□□□ -2.28
COL4A1P02462 MIR1197-201ENST00000408818 88 ntBASIC0.84□□□□□ -2.28
COL4A1P02462 RNU6-1245P-201ENST00000411130 106 ntBASIC0.84□□□□□ -2.28
COL4A1P02462 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.84□□□□□ -2.28
COL4A1P02462 AC078809.1-201ENST00000427601 140 ntBASIC0.84□□□□□ -2.28
COL4A1P02462 AL669831.1-202ENST00000428504 417 ntBASIC0.84□□□□□ -2.28
COL4A1P02462 RPL31P35-201ENST00000431058 377 ntBASIC0.84□□□□□ -2.28
COL4A1P02462 GTF2IP13-201ENST00000438487 386 ntBASIC0.84□□□□□ -2.28
COL4A1P02462 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.84□□□□□ -2.28
COL4A1P02462 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.84□□□□□ -2.28
COL4A1P02462 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.84□□□□□ -2.28
COL4A1P02462 SNORA44.1-201ENST00000517031 108 ntBASIC0.84□□□□□ -2.28
COL4A1P02462 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.84□□□□□ -2.28
COL4A1P02462 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.84□□□□□ -2.28
COL4A1P02462 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.84□□□□□ -2.28
COL4A1P02462 AC073539.2-201ENST00000597113 165 ntBASIC0.84□□□□□ -2.28
COL4A1P02462 NIFKP6-201ENST00000598115 845 ntBASIC0.84□□□□□ -2.28
COL4A1P02462 AC010900.2-201ENST00000604508 210 ntBASIC0.84□□□□□ -2.28
COL4A1P02462 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.84□□□□□ -2.28
COL4A1P02462 RMST_4.1-201ENST00000616886 107 ntBASIC0.84□□□□□ -2.28
COL4A1P02462 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.84□□□□□ -2.28
COL4A1P02462 RNU6-1141P-201ENST00000364520 107 ntBASIC0.83□□□□□ -2.28
COL4A1P02462 RNU6-1127P-201ENST00000384580 107 ntBASIC0.83□□□□□ -2.28
COL4A1P02462 MIR186-201ENST00000384988 86 ntBASIC0.83□□□□□ -2.28
COL4A1P02462 MIR29C-201ENST00000385231 88 ntBASIC0.83□□□□□ -2.28
COL4A1P02462 SNORA12-201ENST00000391162 147 ntBASIC0.83□□□□□ -2.28
COL4A1P02462 RNU2-29P-201ENST00000410423 189 ntBASIC0.83□□□□□ -2.28
COL4A1P02462 RPL30P13-201ENST00000418873 348 ntBASIC0.83□□□□□ -2.28
COL4A1P02462 MTND4P32-201ENST00000437189 1237 ntBASIC0.83□□□□□ -2.28
COL4A1P02462 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.83□□□□□ -2.28
COL4A1P02462 AL162395.1-201ENST00000457882 422 ntBASIC0.83□□□□□ -2.28
COL4A1P02462 GMFBP1-201ENST00000467831 427 ntBASIC0.83□□□□□ -2.28
COL4A1P02462 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.83□□□□□ -2.28
COL4A1P02462 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.83□□□□□ -2.28
COL4A1P02462 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.83□□□□□ -2.28
COL4A1P02462 MIR3941-201ENST00000582572 103 ntBASIC0.83□□□□□ -2.28
COL4A1P02462 AC096720.1-201ENST00000604441 183 ntBASIC0.83□□□□□ -2.28
COL4A1P02462 AC018889.1-201ENST00000605372 397 ntBASIC0.83□□□□□ -2.28
COL4A1P02462 AC087752.4-201ENST00000605911 462 ntBASIC0.83□□□□□ -2.28
COL4A1P02462 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.83□□□□□ -2.28
COL4A1P02462 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms