Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 RNU6-25P-201ENST00000383873 107 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 RNU6-1-201ENST00000383898 107 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 RNU6-36P-201ENST00000384172 107 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 RNU6-4P-201ENST00000384205 107 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 RNU6-5P-201ENST00000384238 107 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 RNU6-3P-201ENST00000384314 107 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 RNU6-16P-201ENST00000384385 107 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 RNU6-15P-201ENST00000384534 107 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 RNU6-2-201ENST00000384627 107 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 RNU6-29P-201ENST00000384637 107 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 RNU6-9-201ENST00000384776 107 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 MIR190B-201ENST00000401119 79 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 MIR1289-2-201ENST00000408360 111 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.04□□□□□ -1.92
COL3A1P02461 TMEM167AP1-201ENST00000423409 219 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 AL356320.1-201ENST00000429616 163 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.04□□□□□ -1.92
COL3A1P02461 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.04□□□□□ -1.92
COL3A1P02461 AC107393.1-201ENST00000512403 346 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 RNU1-86P-201ENST00000516108 154 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 RNU6-927P-201ENST00000516199 100 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 RNU1-107P-201ENST00000516617 154 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 RNU6-255P-201ENST00000516957 105 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 SCARNA24.2-201ENST00000516968 130 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 SNORA31.22-201ENST00000517204 135 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 AC087441.2-201ENST00000529141 262 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 SYF2P1-201ENST00000550658 413 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 MIR4300-201ENST00000581016 96 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 MZT1P2-201ENST00000604387 248 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 RNU6-6P-201ENST00000606623 107 ntBASIC3.04□□□□□ -1.92
COL3A1P02461 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.04□□□□□ -1.92
COL3A1P02461 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
COL3A1P02461 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
COL3A1P02461 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.04□□□□□ -1.92
COL3A1P02461 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.04□□□□□ -1.92
COL3A1P02461 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL3A1P02461 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.04□□□□□ -1.92
COL3A1P02461 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
COL3A1P02461 Y_RNA.358-201ENST00000365491 99 ntBASIC3.03□□□□□ -1.92
COL3A1P02461 RNU6-395P-201ENST00000365662 106 ntBASIC3.03□□□□□ -1.92
COL3A1P02461 RNY3P4-201ENST00000384428 101 ntBASIC3.03□□□□□ -1.92
COL3A1P02461 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.03□□□□□ -1.92
COL3A1P02461 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.03□□□□□ -1.92
COL3A1P02461 AC092427.1-202ENST00000430569 476 ntBASIC3.03□□□□□ -1.92
COL3A1P02461 AL591806.2-201ENST00000433122 173 ntBASIC3.03□□□□□ -1.92
COL3A1P02461 AC013470.1-201ENST00000453438 462 ntBASIC3.03□□□□□ -1.92
COL3A1P02461 AC087588.1-201ENST00000462203 316 ntBASIC3.03□□□□□ -1.92
COL3A1P02461 AC022493.1-201ENST00000492984 337 ntBASIC3.03□□□□□ -1.92
COL3A1P02461 AC010469.2-201ENST00000496412 480 ntBASIC3.03□□□□□ -1.92
COL3A1P02461 RNU6-1315P-201ENST00000517187 99 ntBASIC3.03□□□□□ -1.92
COL3A1P02461 CBX3P4-201ENST00000538909 354 ntBASIC3.03□□□□□ -1.92
COL3A1P02461 AC136932.1-201ENST00000574771 208 ntBASIC3.03□□□□□ -1.92
COL3A1P02461 AC123912.5-201ENST00000605470 343 ntBASIC3.03□□□□□ -1.92
COL3A1P02461 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.03□□□□□ -1.92
COL3A1P02461 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
COL3A1P02461 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
COL3A1P02461 Y_RNA.33-201ENST00000362591 102 ntBASIC3.03□□□□□ -1.93
COL3A1P02461 SNORD113-1-201ENST00000365321 69 ntBASIC3.03□□□□□ -1.93
COL3A1P02461 RNU1-138P-201ENST00000384093 164 ntBASIC3.03□□□□□ -1.93
COL3A1P02461 RNU6-1081P-201ENST00000384537 107 ntBASIC3.03□□□□□ -1.93
COL3A1P02461 RPL21P75-201ENST00000396599 483 ntBASIC3.03□□□□□ -1.93
COL3A1P02461 RPL21P28-201ENST00000401418 483 ntBASIC3.03□□□□□ -1.93
COL3A1P02461 AL079342.1-201ENST00000401460 267 ntBASIC3.03□□□□□ -1.93
COL3A1P02461 RNU6-1140P-201ENST00000410517 106 ntBASIC3.03□□□□□ -1.93
COL3A1P02461 AL513331.1-201ENST00000411908 397 ntBASIC3.03□□□□□ -1.93
COL3A1P02461 AL135786.1-201ENST00000415892 214 ntBASIC3.03□□□□□ -1.93
COL3A1P02461 AL590556.1-201ENST00000423231 483 ntBASIC3.03□□□□□ -1.93
COL3A1P02461 AL592045.1-201ENST00000429867 352 ntBASIC3.03□□□□□ -1.93
COL3A1P02461 RPL21P39-201ENST00000463605 483 ntBASIC3.03□□□□□ -1.93
COL3A1P02461 AC132942.1-201ENST00000486753 483 ntBASIC3.03□□□□□ -1.93
COL3A1P02461 AC093591.1-201ENST00000491435 481 ntBASIC3.03□□□□□ -1.93
COL3A1P02461 RPL21P16-201ENST00000495531 483 ntBASIC3.03□□□□□ -1.93
COL3A1P02461 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.03□□□□□ -1.93
COL3A1P02461 RNU7-175P-201ENST00000515915 61 ntBASIC3.03□□□□□ -1.93
COL3A1P02461 RN7SKP234-201ENST00000517173 224 ntBASIC3.03□□□□□ -1.93
COL3A1P02461 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.03□□□□□ -1.93
COL3A1P02461 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.03□□□□□ -1.93
COL3A1P02461 AL157871.3-201ENST00000557231 293 ntBASIC3.03□□□□□ -1.93
COL3A1P02461 MIR1273D-201ENST00000577266 86 ntBASIC3.03□□□□□ -1.93
COL3A1P02461 Z83818.1-201ENST00000603584 150 ntBASIC3.03□□□□□ -1.93
COL3A1P02461 AC009314.1-201ENST00000603871 304 ntBASIC3.03□□□□□ -1.93
COL3A1P02461 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.03□□□□□ -1.93
COL3A1P02461 AC009318.2-201ENST00000610917 651 ntBASIC3.03□□□□□ -1.93
COL3A1P02461 AL137847.3-201ENST00000611521 109 ntBASIC3.03□□□□□ -1.93
COL3A1P02461 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL3A1P02461 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.02□□□□□ -1.93
COL3A1P02461 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.02□□□□□ -1.93
COL3A1P02461 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL3A1P02461 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL3A1P02461 MIR411-201ENST00000362239 96 ntBASIC3.02□□□□□ -1.93
COL3A1P02461 Y_RNA.16-201ENST00000362421 102 ntBASIC3.02□□□□□ -1.93
COL3A1P02461 RNU6-827P-201ENST00000365553 106 ntBASIC3.02□□□□□ -1.93
COL3A1P02461 Y_RNA.581-201ENST00000391017 97 ntBASIC3.02□□□□□ -1.93
COL3A1P02461 RNU6-882P-201ENST00000391025 103 ntBASIC3.02□□□□□ -1.93
COL3A1P02461 SNORA12.2-201ENST00000391040 156 ntBASIC3.02□□□□□ -1.93
COL3A1P02461 RNU6-837P-201ENST00000391056 108 ntBASIC3.02□□□□□ -1.93
COL3A1P02461 SNORD56-201ENST00000413522 71 ntBASIC3.02□□□□□ -1.93
COL3A1P02461 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.02□□□□□ -1.93
COL3A1P02461 Z98742.3-201ENST00000418637 326 ntBASIC3.02□□□□□ -1.93
COL3A1P02461 RPL39P40-201ENST00000445481 146 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms