Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 EI24P1-201ENST00000416584 867 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 BTF3P4-201ENST00000418852 495 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.33□□□□□ -2.04
COL2A1P02458 PGBD4P6-201ENST00000421501 610 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 PPP1R11P2-201ENST00000423543 382 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 AC092423.1-201ENST00000430165 186 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 CKS1BP5-201ENST00000434172 273 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.33□□□□□ -2.04
COL2A1P02458 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.33□□□□□ -2.04
COL2A1P02458 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.33□□□□□ -2.04
COL2A1P02458 AL360271.2-201ENST00000447710 161 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 MTND4LP30-201ENST00000454092 297 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 AC112492.4-201ENST00000456549 352 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 GZMAP1-201ENST00000503054 631 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.33□□□□□ -2.04
COL2A1P02458 RNU6-1095P-201ENST00000516148 108 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RNU6-914P-201ENST00000516749 109 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RNA5SP471-201ENST00000516971 106 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RNA5SP490-201ENST00000517141 136 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 SNORA31.22-201ENST00000517204 135 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.33□□□□□ -2.04
COL2A1P02458 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.33□□□□□ -2.04
COL2A1P02458 AC090517.1-201ENST00000569307 266 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 MIR4255-201ENST00000579351 72 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.33□□□□□ -2.04
COL2A1P02458 HMGN2P28-201ENST00000606102 262 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 RNU6-6P-201ENST00000606623 107 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 AL021879.1-201ENST00000611756 288 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 SDR42E1P2-201ENST00000614861 481 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 MIR4272-201ENST00000635924 64 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 Z99571.1-201ENST00000636677 394 ntBASIC2.33□□□□□ -2.04
COL2A1P02458 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.32□□□□□ -2.04
COL2A1P02458 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
COL2A1P02458 FAM35CP-201ENST00000554755 2470 ntBASIC2.32□□□□□ -2.04
COL2A1P02458 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.32□□□□□ -2.04
COL2A1P02458 AC026241.1-201ENST00000517873 2142 ntBASIC2.32□□□□□ -2.04
COL2A1P02458 UBE2L2-201ENST00000254302 429 ntBASIC2.32□□□□□ -2.04
COL2A1P02458 Y_RNA.152-201ENST00000363578 100 ntBASIC2.32□□□□□ -2.04
COL2A1P02458 RNU6-770P-201ENST00000363929 105 ntBASIC2.32□□□□□ -2.04
COL2A1P02458 SNORD27-201ENST00000363981 72 ntBASIC2.32□□□□□ -2.04
COL2A1P02458 RNU6-1317P-201ENST00000364582 104 ntBASIC2.32□□□□□ -2.04
COL2A1P02458 SNORA20.1-201ENST00000364790 130 ntBASIC2.32□□□□□ -2.04
COL2A1P02458 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
COL2A1P02458 Y_RNA.556-201ENST00000384677 113 ntBASIC2.32□□□□□ -2.04
COL2A1P02458 RNU2-20P-201ENST00000410425 191 ntBASIC2.32□□□□□ -2.04
COL2A1P02458 AP000275.1-201ENST00000411943 390 ntBASIC2.32□□□□□ -2.04
COL2A1P02458 RPL21P38-201ENST00000418090 167 ntBASIC2.32□□□□□ -2.04
COL2A1P02458 HMGN2P21-201ENST00000447764 270 ntBASIC2.32□□□□□ -2.04
COL2A1P02458 snoU109.4-201ENST00000458953 143 ntBASIC2.32□□□□□ -2.04
COL2A1P02458 SNORD13-201ENST00000459299 104 ntBASIC2.32□□□□□ -2.04
COL2A1P02458 RNU7-138P-201ENST00000459479 64 ntBASIC2.32□□□□□ -2.04
COL2A1P02458 RPS23P3-201ENST00000470993 430 ntBASIC2.32□□□□□ -2.04
COL2A1P02458 AC087190.1-201ENST00000484462 480 ntBASIC2.32□□□□□ -2.04
COL2A1P02458 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.32□□□□□ -2.04
COL2A1P02458 SUMO2P6-201ENST00000505273 288 ntBASIC2.32□□□□□ -2.04
COL2A1P02458 AC113155.1-201ENST00000511141 769 ntBASIC2.32□□□□□ -2.04
COL2A1P02458 RNU6-897P-201ENST00000517135 105 ntBASIC2.32□□□□□ -2.04
COL2A1P02458 RN7SKP234-201ENST00000517173 224 ntBASIC2.32□□□□□ -2.04
COL2A1P02458 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
COL2A1P02458 AC022616.4-201ENST00000522985 181 ntBASIC2.32□□□□□ -2.04
COL2A1P02458 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
COL2A1P02458 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.32□□□□□ -2.04
COL2A1P02458 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.32□□□□□ -2.04
COL2A1P02458 AC005899.2-201ENST00000584353 90 ntBASIC2.32□□□□□ -2.04
COL2A1P02458 AL355297.3-201ENST00000604082 446 ntBASIC2.32□□□□□ -2.04
COL2A1P02458 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
COL2A1P02458 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
COL2A1P02458 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.32□□□□□ -2.04
COL2A1P02458 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
COL2A1P02458 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
COL2A1P02458 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
COL2A1P02458 Y_RNA.14-201ENST00000362415 103 ntBASIC2.31□□□□□ -2.04
COL2A1P02458 RNU6-774P-201ENST00000363238 107 ntBASIC2.31□□□□□ -2.04
COL2A1P02458 RNU4-42P-201ENST00000364738 142 ntBASIC2.31□□□□□ -2.04
COL2A1P02458 Y_RNA.324-201ENST00000365165 102 ntBASIC2.31□□□□□ -2.04
COL2A1P02458 Y_RNA.350-201ENST00000365409 98 ntBASIC2.31□□□□□ -2.04
COL2A1P02458 Y_RNA.552-201ENST00000384665 112 ntBASIC2.31□□□□□ -2.04
COL2A1P02458 MIR521-1-201ENST00000384902 87 ntBASIC2.31□□□□□ -2.04
COL2A1P02458 MIR153-1-201ENST00000384914 90 ntBASIC2.31□□□□□ -2.04
COL2A1P02458 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
COL2A1P02458 RNU2-43P-201ENST00000410306 190 ntBASIC2.31□□□□□ -2.04
COL2A1P02458 RNU2-33P-201ENST00000410344 192 ntBASIC2.31□□□□□ -2.04
COL2A1P02458 RNU6-293P-201ENST00000411259 106 ntBASIC2.31□□□□□ -2.04
COL2A1P02458 AP1B1P2-201ENST00000416196 106 ntBASIC2.31□□□□□ -2.04
COL2A1P02458 AL645568.3-201ENST00000433683 316 ntBASIC2.31□□□□□ -2.04
COL2A1P02458 AC099799.1-201ENST00000439809 192 ntBASIC2.31□□□□□ -2.04
COL2A1P02458 RPL23AP33-201ENST00000442301 452 ntBASIC2.31□□□□□ -2.04
COL2A1P02458 AL049874.1-201ENST00000489560 388 ntBASIC2.31□□□□□ -2.04
COL2A1P02458 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.31□□□□□ -2.04
COL2A1P02458 AC025465.3-201ENST00000510570 311 ntBASIC2.31□□□□□ -2.04
COL2A1P02458 RNU1-86P-201ENST00000516108 154 ntBASIC2.31□□□□□ -2.04
COL2A1P02458 Y_RNA.687-201ENST00000516558 91 ntBASIC2.31□□□□□ -2.04
COL2A1P02458 RNU1-107P-201ENST00000516617 154 ntBASIC2.31□□□□□ -2.04
COL2A1P02458 RNU6-111P-201ENST00000517179 105 ntBASIC2.31□□□□□ -2.04
COL2A1P02458 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.31□□□□□ -2.04
COL2A1P02458 SUB1P3-201ENST00000564581 315 ntBASIC2.31□□□□□ -2.04
COL2A1P02458 MIR3683-201ENST00000580847 82 ntBASIC2.31□□□□□ -2.04
COL2A1P02458 Y_RNA.65-201ENST00000362846 100 ntBASIC2.3□□□□□ -2.04
COL2A1P02458 RNU6-1155P-201ENST00000363554 107 ntBASIC2.3□□□□□ -2.04
COL2A1P02458 Y_RNA.380-201ENST00000365663 111 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms