Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC010409.1-201ENST00000487382 476 ntBASIC1.21□□□□□ -2.22
HLA-DQB1P01920 Y_RNA.654-201ENST00000497848 106 ntBASIC1.21□□□□□ -2.22
HLA-DQB1P01920 AC091885.1-201ENST00000506658 268 ntBASIC1.21□□□□□ -2.22
HLA-DQB1P01920 RNA5SP401-201ENST00000515920 127 ntBASIC1.21□□□□□ -2.22
HLA-DQB1P01920 AC087854.1-201ENST00000519706 414 ntBASIC1.21□□□□□ -2.22
HLA-DQB1P01920 AC016256.1-201ENST00000547971 354 ntBASIC1.21□□□□□ -2.22
HLA-DQB1P01920 SCOCP1-201ENST00000554676 349 ntBASIC1.21□□□□□ -2.22
HLA-DQB1P01920 AC008269.2-201ENST00000561915 1105 ntBASIC1.21□□□□□ -2.22
HLA-DQB1P01920 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.21□□□□□ -2.22
HLA-DQB1P01920 AC005786.1-201ENST00000588553 154 ntBASIC1.21□□□□□ -2.22
HLA-DQB1P01920 AC011494.1-201ENST00000596454 237 ntBASIC1.21□□□□□ -2.22
HLA-DQB1P01920 AC064807.4-201ENST00000607201 407 ntBASIC1.21□□□□□ -2.22
HLA-DQB1P01920 AC092807.2-201ENST00000609367 243 ntBASIC1.21□□□□□ -2.22
HLA-DQB1P01920 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.21□□□□□ -2.22
HLA-DQB1P01920 MIR6863-201ENST00000636112 90 ntBASIC1.21□□□□□ -2.22
HLA-DQB1P01920 AC091812.1-201ENST00000432235 1948 ntBASIC1.21□□□□□ -2.22
HLA-DQB1P01920 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
HLA-DQB1P01920 RNU6-227P-201ENST00000362865 103 ntBASIC1.2□□□□□ -2.22
HLA-DQB1P01920 RNU6-522P-201ENST00000364497 107 ntBASIC1.2□□□□□ -2.22
HLA-DQB1P01920 SNORD31B-201ENST00000364977 69 ntBASIC1.2□□□□□ -2.22
HLA-DQB1P01920 MTCO3P40-201ENST00000392516 676 ntBASIC1.2□□□□□ -2.22
HLA-DQB1P01920 MTCO1P20-201ENST00000425366 358 ntBASIC1.2□□□□□ -2.22
HLA-DQB1P01920 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.2□□□□□ -2.22
HLA-DQB1P01920 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.2□□□□□ -2.22
HLA-DQB1P01920 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.2□□□□□ -2.22
HLA-DQB1P01920 MTCO1P44-201ENST00000441935 243 ntBASIC1.2□□□□□ -2.22
HLA-DQB1P01920 SNRPEP8-201ENST00000442866 260 ntBASIC1.2□□□□□ -2.22
HLA-DQB1P01920 AC007677.1-201ENST00000445757 515 ntBASIC1.2□□□□□ -2.22
HLA-DQB1P01920 AC016925.1-201ENST00000458303 298 ntBASIC1.2□□□□□ -2.22
HLA-DQB1P01920 RNU6-1208P-201ENST00000459588 107 ntBASIC1.2□□□□□ -2.22
HLA-DQB1P01920 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.2□□□□□ -2.22
HLA-DQB1P01920 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.2□□□□□ -2.22
HLA-DQB1P01920 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.2□□□□□ -2.22
HLA-DQB1P01920 AC019235.1-201ENST00000503847 207 ntBASIC1.2□□□□□ -2.22
HLA-DQB1P01920 AC025465.4-201ENST00000513422 638 ntBASIC1.2□□□□□ -2.22
HLA-DQB1P01920 RNU6-567P-201ENST00000516746 107 ntBASIC1.2□□□□□ -2.22
HLA-DQB1P01920 SNORD60.2-201ENST00000516883 86 ntBASIC1.2□□□□□ -2.22
HLA-DQB1P01920 DEFB131C-201ENST00000528817 165 ntBASIC1.2□□□□□ -2.22
HLA-DQB1P01920 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.2□□□□□ -2.22
HLA-DQB1P01920 AL157687.1-201ENST00000554853 619 ntBASIC1.2□□□□□ -2.22
HLA-DQB1P01920 AL121757.2-201ENST00000611223 313 ntBASIC1.2□□□□□ -2.22
HLA-DQB1P01920 AL158209.2-201ENST00000619266 216 ntBASIC1.2□□□□□ -2.22
HLA-DQB1P01920 AL136221.1-201ENST00000621449 509 ntBASIC1.2□□□□□ -2.22
HLA-DQB1P01920 AL359880.1-201ENST00000621879 266 ntBASIC1.2□□□□□ -2.22
HLA-DQB1P01920 AC130454.1-201ENST00000622948 401 ntBASIC1.2□□□□□ -2.22
HLA-DQB1P01920 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.2□□□□□ -2.22
HLA-DQB1P01920 AC121333.1-201ENST00000567488 2709 ntBASIC1.2□□□□□ -2.22
HLA-DQB1P01920 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
HLA-DQB1P01920 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.19□□□□□ -2.22
HLA-DQB1P01920 AC009541.1-201ENST00000438279 2662 ntBASIC1.19□□□□□ -2.22
HLA-DQB1P01920 RNU5B-2P-201ENST00000363036 113 ntBASIC1.19□□□□□ -2.22
HLA-DQB1P01920 RNU6-1317P-201ENST00000364582 104 ntBASIC1.19□□□□□ -2.22
HLA-DQB1P01920 SNORA29-201ENST00000384183 140 ntBASIC1.19□□□□□ -2.22
HLA-DQB1P01920 SNORD116-2-201ENST00000384274 95 ntBASIC1.19□□□□□ -2.22
HLA-DQB1P01920 Y_RNA.481-201ENST00000384373 102 ntBASIC1.19□□□□□ -2.22
HLA-DQB1P01920 SNORD116-6-201ENST00000384711 96 ntBASIC1.19□□□□□ -2.22
HLA-DQB1P01920 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
HLA-DQB1P01920 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
HLA-DQB1P01920 AC139712.2-201ENST00000424302 339 ntBASIC1.19□□□□□ -2.22
HLA-DQB1P01920 AL354695.1-201ENST00000427935 228 ntBASIC1.19□□□□□ -2.22
HLA-DQB1P01920 TIMM9P3-201ENST00000428659 274 ntBASIC1.19□□□□□ -2.22
HLA-DQB1P01920 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.19□□□□□ -2.22
HLA-DQB1P01920 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.19□□□□□ -2.22
HLA-DQB1P01920 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.19□□□□□ -2.22
HLA-DQB1P01920 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.19□□□□□ -2.22
HLA-DQB1P01920 RPS29P29-201ENST00000456396 171 ntBASIC1.19□□□□□ -2.22
HLA-DQB1P01920 SRRM1P2-201ENST00000464531 1192 ntBASIC1.19□□□□□ -2.22
HLA-DQB1P01920 AC092436.3-201ENST00000511788 257 ntBASIC1.19□□□□□ -2.22
HLA-DQB1P01920 Y_RNA.693-201ENST00000516641 110 ntBASIC1.19□□□□□ -2.22
HLA-DQB1P01920 AC025423.5-201ENST00000550230 219 ntBASIC1.19□□□□□ -2.22
HLA-DQB1P01920 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.19□□□□□ -2.22
HLA-DQB1P01920 SNORD53B-201ENST00000577887 78 ntBASIC1.19□□□□□ -2.22
HLA-DQB1P01920 CPDP1-201ENST00000579660 283 ntBASIC1.19□□□□□ -2.22
HLA-DQB1P01920 NBR2-204ENST00000587322 63 ntBASIC1.19□□□□□ -2.22
HLA-DQB1P01920 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.19□□□□□ -2.22
HLA-DQB1P01920 FAM157A-202ENST00000615155 405 ntBASIC1.19□□□□□ -2.22
HLA-DQB1P01920 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.19□□□□□ -2.22
HLA-DQB1P01920 OR5AK4P-201ENST00000635912 903 ntBASIC1.19□□□□□ -2.22
HLA-DQB1P01920 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
HLA-DQB1P01920 RNU6-1085P-201ENST00000363576 107 ntBASIC1.18□□□□□ -2.22
HLA-DQB1P01920 RNU6-112P-201ENST00000363599 104 ntBASIC1.18□□□□□ -2.22
HLA-DQB1P01920 RNU4-13P-201ENST00000364019 141 ntBASIC1.18□□□□□ -2.22
HLA-DQB1P01920 RNU6-296P-201ENST00000384608 107 ntBASIC1.18□□□□□ -2.22
HLA-DQB1P01920 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
HLA-DQB1P01920 RNU6-780P-201ENST00000391030 104 ntBASIC1.18□□□□□ -2.22
HLA-DQB1P01920 MIR208B-201ENST00000401172 77 ntBASIC1.18□□□□□ -2.22
HLA-DQB1P01920 AL513185.2-201ENST00000425543 193 ntBASIC1.18□□□□□ -2.22
HLA-DQB1P01920 SDAD1P3-201ENST00000427380 333 ntBASIC1.18□□□□□ -2.22
HLA-DQB1P01920 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.18□□□□□ -2.22
HLA-DQB1P01920 SNRPGP13-201ENST00000442212 177 ntBASIC1.18□□□□□ -2.22
HLA-DQB1P01920 AL359672.1-201ENST00000442302 409 ntBASIC1.18□□□□□ -2.22
HLA-DQB1P01920 HMGN2P23-201ENST00000456759 269 ntBASIC1.18□□□□□ -2.22
HLA-DQB1P01920 RNU7-14P-201ENST00000459331 62 ntBASIC1.18□□□□□ -2.22
HLA-DQB1P01920 RNA5SP57-201ENST00000459463 123 ntBASIC1.18□□□□□ -2.22
HLA-DQB1P01920 AC010531.2-201ENST00000465012 153 ntBASIC1.18□□□□□ -2.22
HLA-DQB1P01920 RPL9P9-202ENST00000466501 579 ntBASIC1.18□□□□□ -2.22
HLA-DQB1P01920 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.18□□□□□ -2.22
HLA-DQB1P01920 SNORA31.17-201ENST00000516953 127 ntBASIC1.18□□□□□ -2.22
HLA-DQB1P01920 SNORA31.24-201ENST00000517232 57 ntBASIC1.18□□□□□ -2.22
HLA-DQB1P01920 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms