Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 RNU6-323P-201ENST00000521915 107 ntBASIC1.63□□□□□ -2.15
TGFAP01135 AK6P1-201ENST00000540219 478 ntBASIC1.63□□□□□ -2.15
TGFAP01135 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.63□□□□□ -2.15
TGFAP01135 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.63□□□□□ -2.15
TGFAP01135 AC016925.2-201ENST00000605108 242 ntBASIC1.63□□□□□ -2.15
TGFAP01135 RN7SKP299-201ENST00000606679 301 ntBASIC1.63□□□□□ -2.15
TGFAP01135 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.63□□□□□ -2.15
TGFAP01135 AL159152.1-201ENST00000635019 2587 ntBASIC1.63□□□□□ -2.15
TGFAP01135 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
TGFAP01135 Y_RNA.164-201ENST00000363709 102 ntBASIC1.62□□□□□ -2.15
TGFAP01135 Y_RNA.238-201ENST00000364441 102 ntBASIC1.62□□□□□ -2.15
TGFAP01135 RNU4-42P-201ENST00000364738 142 ntBASIC1.62□□□□□ -2.15
TGFAP01135 RNU4-66P-201ENST00000365199 138 ntBASIC1.62□□□□□ -2.15
TGFAP01135 Y_RNA.359-201ENST00000365498 102 ntBASIC1.62□□□□□ -2.15
TGFAP01135 RNU6-1329P-201ENST00000365664 107 ntBASIC1.62□□□□□ -2.15
TGFAP01135 SNORD116-9-201ENST00000384000 95 ntBASIC1.62□□□□□ -2.15
TGFAP01135 RNU6-38P-201ENST00000384085 107 ntBASIC1.62□□□□□ -2.15
TGFAP01135 SNORD116-3-201ENST00000384287 95 ntBASIC1.62□□□□□ -2.15
TGFAP01135 SNORD116-7-201ENST00000384404 95 ntBASIC1.62□□□□□ -2.15
TGFAP01135 SNORD116-5-201ENST00000384462 95 ntBASIC1.62□□□□□ -2.15
TGFAP01135 Y_RNA.595-201ENST00000410403 105 ntBASIC1.62□□□□□ -2.15
TGFAP01135 RPL23AP36-201ENST00000413895 458 ntBASIC1.62□□□□□ -2.15
TGFAP01135 USP9YP28-201ENST00000435142 589 ntBASIC1.62□□□□□ -2.15
TGFAP01135 UBE2V1P8-201ENST00000437166 265 ntBASIC1.62□□□□□ -2.15
TGFAP01135 RPS29P27-201ENST00000463711 170 ntBASIC1.62□□□□□ -2.15
TGFAP01135 AC010531.2-201ENST00000465012 153 ntBASIC1.62□□□□□ -2.15
TGFAP01135 HMGN1P13-201ENST00000505795 138 ntBASIC1.62□□□□□ -2.15
TGFAP01135 SNORA19.2-201ENST00000516013 114 ntBASIC1.62□□□□□ -2.15
TGFAP01135 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.62□□□□□ -2.15
TGFAP01135 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.62□□□□□ -2.15
TGFAP01135 SCOCP1-201ENST00000554676 349 ntBASIC1.62□□□□□ -2.15
TGFAP01135 AL357078.3-201ENST00000607528 618 ntBASIC1.62□□□□□ -2.15
TGFAP01135 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
TGFAP01135 AC083806.3-201ENST00000614016 455 ntBASIC1.62□□□□□ -2.15
TGFAP01135 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.62□□□□□ -2.15
TGFAP01135 AP000553.5-201ENST00000641933 54 ntBASIC1.62□□□□□ -2.15
TGFAP01135 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.62□□□□□ -2.15
TGFAP01135 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TGFAP01135 RNU6-414P-201ENST00000363705 104 ntBASIC1.61□□□□□ -2.15
TGFAP01135 Y_RNA.381-201ENST00000365666 102 ntBASIC1.61□□□□□ -2.15
TGFAP01135 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
TGFAP01135 DEFB108C-201ENST00000400154 252 ntBASIC1.61□□□□□ -2.15
TGFAP01135 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.61□□□□□ -2.15
TGFAP01135 RPL21P111-201ENST00000418453 477 ntBASIC1.61□□□□□ -2.15
TGFAP01135 FTH1P12-201ENST00000432137 551 ntBASIC1.61□□□□□ -2.15
TGFAP01135 AL359672.1-201ENST00000442302 409 ntBASIC1.61□□□□□ -2.15
TGFAP01135 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TGFAP01135 RNU6-717P-201ENST00000459076 104 ntBASIC1.61□□□□□ -2.15
TGFAP01135 RN7SKP210-201ENST00000459176 261 ntBASIC1.61□□□□□ -2.15
TGFAP01135 RPL39P5-202ENST00000512505 151 ntBASIC1.61□□□□□ -2.15
TGFAP01135 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.61□□□□□ -2.15
TGFAP01135 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.61□□□□□ -2.15
TGFAP01135 AC025423.5-201ENST00000550230 219 ntBASIC1.61□□□□□ -2.15
TGFAP01135 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.61□□□□□ -2.15
TGFAP01135 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.61□□□□□ -2.15
TGFAP01135 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.61□□□□□ -2.15
TGFAP01135 AC245008.1-201ENST00000608123 476 ntBASIC1.61□□□□□ -2.15
TGFAP01135 AC064836.2-201ENST00000609491 462 ntBASIC1.61□□□□□ -2.15
TGFAP01135 ZNF355P-201ENST00000427301 3216 ntBASIC1.61□□□□□ -2.15
TGFAP01135 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.6□□□□□ -2.15
TGFAP01135 MIR126-201ENST00000362291 85 ntBASIC1.6□□□□□ -2.15
TGFAP01135 RNA5SP138-201ENST00000365098 114 ntBASIC1.6□□□□□ -2.15
TGFAP01135 SNORA69-201ENST00000383895 132 ntBASIC1.6□□□□□ -2.15
TGFAP01135 RNU6-296P-201ENST00000384608 107 ntBASIC1.6□□□□□ -2.15
TGFAP01135 MIR520A-201ENST00000384862 85 ntBASIC1.6□□□□□ -2.15
TGFAP01135 RNA5SP338-201ENST00000410495 85 ntBASIC1.6□□□□□ -2.15
TGFAP01135 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.6□□□□□ -2.15
TGFAP01135 TPT1P7-201ENST00000458300 517 ntBASIC1.6□□□□□ -2.15
TGFAP01135 snoU13.9-201ENST00000458927 103 ntBASIC1.6□□□□□ -2.15
TGFAP01135 RNU6-1208P-201ENST00000459588 107 ntBASIC1.6□□□□□ -2.15
TGFAP01135 AC096745.1-201ENST00000509945 370 ntBASIC1.6□□□□□ -2.15
TGFAP01135 SNORA25.15-201ENST00000516487 89 ntBASIC1.6□□□□□ -2.15
TGFAP01135 RNU6-856P-201ENST00000516959 98 ntBASIC1.6□□□□□ -2.15
TGFAP01135 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.6□□□□□ -2.15
TGFAP01135 MIR4422-201ENST00000581938 83 ntBASIC1.6□□□□□ -2.15
TGFAP01135 MIR3611-201ENST00000584484 83 ntBASIC1.6□□□□□ -2.15
TGFAP01135 MIR5692C1-201ENST00000585309 91 ntBASIC1.6□□□□□ -2.15
TGFAP01135 AC023043.2-201ENST00000589678 1026 ntBASIC1.6□□□□□ -2.15
TGFAP01135 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.6□□□□□ -2.15
TGFAP01135 AC005562.2-201ENST00000618264 111 ntBASIC1.6□□□□□ -2.15
TGFAP01135 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TGFAP01135 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
TGFAP01135 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.59□□□□□ -2.15
TGFAP01135 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
TGFAP01135 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
TGFAP01135 RNU5B-2P-201ENST00000363036 113 ntBASIC1.59□□□□□ -2.15
TGFAP01135 Y_RNA.378-201ENST00000365652 113 ntBASIC1.59□□□□□ -2.15
TGFAP01135 SNORA18.2-201ENST00000383865 132 ntBASIC1.59□□□□□ -2.15
TGFAP01135 RNU6-1286P-201ENST00000383871 107 ntBASIC1.59□□□□□ -2.15
TGFAP01135 RNU6-214P-201ENST00000384130 107 ntBASIC1.59□□□□□ -2.15
TGFAP01135 SNORA29-201ENST00000384183 140 ntBASIC1.59□□□□□ -2.15
TGFAP01135 RNU6-439P-201ENST00000384188 106 ntBASIC1.59□□□□□ -2.15
TGFAP01135 EIF4E2P1-201ENST00000393781 255 ntBASIC1.59□□□□□ -2.15
TGFAP01135 MTND3P9-201ENST00000429526 346 ntBASIC1.59□□□□□ -2.15
TGFAP01135 AC069257.2-201ENST00000441819 155 ntBASIC1.59□□□□□ -2.15
TGFAP01135 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.59□□□□□ -2.15
TGFAP01135 AC067942.3-201ENST00000512025 362 ntBASIC1.59□□□□□ -2.15
TGFAP01135 RNU6-405P-201ENST00000516637 110 ntBASIC1.59□□□□□ -2.15
TGFAP01135 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.59□□□□□ -2.15
TGFAP01135 AL157687.1-201ENST00000554853 619 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 203.5 ms