Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 RNU6-1144P-201ENST00000384247 104 ntBASIC3.43□□□□□ -1.86
TRIM13O60858 EI24P2-201ENST00000397776 1076 ntBASIC3.43□□□□□ -1.86
TRIM13O60858 U3.37-201ENST00000408528 213 ntBASIC3.43□□□□□ -1.86
TRIM13O60858 RPL23AP82-202ENST00000427528 469 ntBASIC3.43□□□□□ -1.86
TRIM13O60858 AC006026.2-201ENST00000457376 180 ntBASIC3.43□□□□□ -1.86
TRIM13O60858 CENPBD1P1-201ENST00000464061 469 ntBASIC3.43□□□□□ -1.86
TRIM13O60858 RN7SKP179-201ENST00000516126 217 ntBASIC3.43□□□□□ -1.86
TRIM13O60858 RNU6-155P-201ENST00000516347 100 ntBASIC3.43□□□□□ -1.86
TRIM13O60858 AC107934.2-201ENST00000518653 310 ntBASIC3.43□□□□□ -1.86
TRIM13O60858 CYCSP23-201ENST00000519781 313 ntBASIC3.43□□□□□ -1.86
TRIM13O60858 AC018448.1-201ENST00000552843 316 ntBASIC3.43□□□□□ -1.86
TRIM13O60858 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.43□□□□□ -1.86
TRIM13O60858 MIR4700-201ENST00000578311 74 ntBASIC3.43□□□□□ -1.86
TRIM13O60858 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.43□□□□□ -1.86
TRIM13O60858 AL356157.2-201ENST00000605122 111 ntBASIC3.43□□□□□ -1.86
TRIM13O60858 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM13O60858 AL110115.1-201ENST00000614396 364 ntBASIC3.43□□□□□ -1.86
TRIM13O60858 AC004467.1-201ENST00000615678 330 ntBASIC3.43□□□□□ -1.86
TRIM13O60858 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.43□□□□□ -1.86
TRIM13O60858 MFSD8-236ENST00000641509 4050 ntBASIC3.43□□□□□ -1.86
TRIM13O60858 OTUD4P1-201ENST00000237841 3067 ntBASIC3.43□□□□□ -1.86
TRIM13O60858 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM13O60858 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
TRIM13O60858 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM13O60858 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM13O60858 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM13O60858 snoU2_19.4-201ENST00000364329 80 ntBASIC3.42□□□□□ -1.86
TRIM13O60858 Y_RNA.309-201ENST00000365046 111 ntBASIC3.42□□□□□ -1.86
TRIM13O60858 RNU6-763P-201ENST00000390865 106 ntBASIC3.42□□□□□ -1.86
TRIM13O60858 RN7SKP156-201ENST00000410308 342 ntBASIC3.42□□□□□ -1.86
TRIM13O60858 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.42□□□□□ -1.86
TRIM13O60858 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.42□□□□□ -1.86
TRIM13O60858 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.42□□□□□ -1.86
TRIM13O60858 HMGN1P18-201ENST00000457642 277 ntBASIC3.42□□□□□ -1.86
TRIM13O60858 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.42□□□□□ -1.86
TRIM13O60858 AC026402.1-201ENST00000513642 170 ntBASIC3.42□□□□□ -1.86
TRIM13O60858 RNU1-61P-201ENST00000516107 151 ntBASIC3.42□□□□□ -1.86
TRIM13O60858 RNU6-844P-201ENST00000517175 102 ntBASIC3.42□□□□□ -1.86
TRIM13O60858 MIR4286-201ENST00000580651 93 ntBASIC3.42□□□□□ -1.86
TRIM13O60858 AL078604.3-201ENST00000615580 211 ntBASIC3.42□□□□□ -1.86
TRIM13O60858 AC091932.3-201ENST00000624223 323 ntBASIC3.42□□□□□ -1.86
TRIM13O60858 RNA5SP196-201ENST00000625967 102 ntBASIC3.42□□□□□ -1.86
TRIM13O60858 U6.99-201ENST00000637524 83 ntBASIC3.42□□□□□ -1.86
TRIM13O60858 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.42□□□□□ -1.86
TRIM13O60858 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM13O60858 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM13O60858 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM13O60858 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.41□□□□□ -1.86
TRIM13O60858 RNU2-54P-201ENST00000410299 190 ntBASIC3.41□□□□□ -1.86
TRIM13O60858 RNU6-1245P-201ENST00000411130 106 ntBASIC3.41□□□□□ -1.86
TRIM13O60858 AC112220.1-201ENST00000434628 355 ntBASIC3.41□□□□□ -1.86
TRIM13O60858 AL357134.1-201ENST00000445848 426 ntBASIC3.41□□□□□ -1.86
TRIM13O60858 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM13O60858 HMGN2P16-201ENST00000456802 261 ntBASIC3.41□□□□□ -1.86
TRIM13O60858 U8.19-201ENST00000459095 133 ntBASIC3.41□□□□□ -1.86
TRIM13O60858 RNU7-107P-201ENST00000459121 61 ntBASIC3.41□□□□□ -1.86
TRIM13O60858 RN7SL330P-201ENST00000469709 307 ntBASIC3.41□□□□□ -1.86
TRIM13O60858 RNU6-703P-201ENST00000516946 107 ntBASIC3.41□□□□□ -1.86
TRIM13O60858 AC021269.2-201ENST00000532318 330 ntBASIC3.41□□□□□ -1.86
TRIM13O60858 AC109810.1-201ENST00000534066 224 ntBASIC3.41□□□□□ -1.86
TRIM13O60858 CYCSP39-201ENST00000565821 309 ntBASIC3.41□□□□□ -1.86
TRIM13O60858 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM13O60858 MTND5P35-201ENST00000557537 1720 ntBASIC3.41□□□□□ -1.86
TRIM13O60858 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.41□□□□□ -1.86
TRIM13O60858 AC091152.2-201ENST00000591628 2569 ntBASIC3.4□□□□□ -1.86
TRIM13O60858 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
TRIM13O60858 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
TRIM13O60858 RNU6-942P-201ENST00000363002 107 ntBASIC3.4□□□□□ -1.87
TRIM13O60858 Y_RNA.525-201ENST00000384570 113 ntBASIC3.4□□□□□ -1.87
TRIM13O60858 MIR888-201ENST00000401186 77 ntBASIC3.4□□□□□ -1.87
TRIM13O60858 AC009963.1-201ENST00000417265 157 ntBASIC3.4□□□□□ -1.87
TRIM13O60858 HMGN2P30-201ENST00000423237 256 ntBASIC3.4□□□□□ -1.87
TRIM13O60858 MTATP6P7-201ENST00000453315 681 ntBASIC3.4□□□□□ -1.87
TRIM13O60858 RPL30P12-201ENST00000474666 353 ntBASIC3.4□□□□□ -1.87
TRIM13O60858 AC092991.1-201ENST00000477176 376 ntBASIC3.4□□□□□ -1.87
TRIM13O60858 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM13O60858 FCF1P8-201ENST00000510322 597 ntBASIC3.4□□□□□ -1.87
TRIM13O60858 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.4□□□□□ -1.87
TRIM13O60858 RNA5SP76-201ENST00000516277 87 ntBASIC3.4□□□□□ -1.87
TRIM13O60858 RNU6-589P-201ENST00000516485 107 ntBASIC3.4□□□□□ -1.87
TRIM13O60858 Y_RNA.712-201ENST00000517011 92 ntBASIC3.4□□□□□ -1.87
TRIM13O60858 MIR2116-201ENST00000517221 80 ntBASIC3.4□□□□□ -1.87
TRIM13O60858 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM13O60858 LARP7P3-201ENST00000579888 337 ntBASIC3.4□□□□□ -1.87
TRIM13O60858 AC024581.2-201ENST00000619986 252 ntBASIC3.4□□□□□ -1.87
TRIM13O60858 MIR6758-201ENST00000620653 63 ntBASIC3.4□□□□□ -1.87
TRIM13O60858 AP001340.1-201ENST00000624405 217 ntBASIC3.4□□□□□ -1.87
TRIM13O60858 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.4□□□□□ -1.87
TRIM13O60858 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.4□□□□□ -1.87
TRIM13O60858 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM13O60858 CUL1P1-201ENST00000509510 2425 ntBASIC3.4□□□□□ -1.87
TRIM13O60858 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM13O60858 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.4□□□□□ -1.87
TRIM13O60858 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM13O60858 AC017071.1-201ENST00000564407 2204 ntBASIC3.39□□□□□ -1.87
TRIM13O60858 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
TRIM13O60858 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM13O60858 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.39□□□□□ -1.87
TRIM13O60858 AC068700.1-201ENST00000565862 3754 ntBASIC3.39□□□□□ -1.87
TRIM13O60858 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms