Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 Z98751.3-201ENST00000604447 521 ntBASIC2.85□□□□□ -1.95
SNX2O60749 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.85□□□□□ -1.95
SNX2O60749 AC008121.3-201ENST00000618726 433 ntBASIC2.85□□□□□ -1.95
SNX2O60749 FO624990.1-201ENST00000636373 85 ntBASIC2.85□□□□□ -1.95
SNX2O60749 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SNX2O60749 AC091812.1-201ENST00000432235 1948 ntBASIC2.85□□□□□ -1.95
SNX2O60749 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SNX2O60749 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
SNX2O60749 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.84□□□□□ -1.95
SNX2O60749 Y_RNA.106-201ENST00000363189 100 ntBASIC2.84□□□□□ -1.95
SNX2O60749 RNA5SP393-201ENST00000363423 117 ntBASIC2.84□□□□□ -1.95
SNX2O60749 SNORA5B-201ENST00000363786 132 ntBASIC2.84□□□□□ -1.95
SNX2O60749 U8.10-201ENST00000384260 133 ntBASIC2.84□□□□□ -1.95
SNX2O60749 MIR512-1-201ENST00000384913 84 ntBASIC2.84□□□□□ -1.95
SNX2O60749 Y_RNA.645-201ENST00000391229 102 ntBASIC2.84□□□□□ -1.95
SNX2O60749 MRPL42P3-201ENST00000401492 326 ntBASIC2.84□□□□□ -1.95
SNX2O60749 MTND2P23-201ENST00000422990 651 ntBASIC2.84□□□□□ -1.95
SNX2O60749 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.84□□□□□ -1.95
SNX2O60749 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.84□□□□□ -1.95
SNX2O60749 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.84□□□□□ -1.95
SNX2O60749 AC107083.1-201ENST00000439643 279 ntBASIC2.84□□□□□ -1.95
SNX2O60749 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.84□□□□□ -1.95
SNX2O60749 U8.22-201ENST00000459141 133 ntBASIC2.84□□□□□ -1.95
SNX2O60749 AC073901.1-201ENST00000462471 408 ntBASIC2.84□□□□□ -1.95
SNX2O60749 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.84□□□□□ -1.95
SNX2O60749 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.84□□□□□ -1.95
SNX2O60749 SNORA25.10-201ENST00000515926 124 ntBASIC2.84□□□□□ -1.95
SNX2O60749 RNU2-53P-201ENST00000516257 147 ntBASIC2.84□□□□□ -1.95
SNX2O60749 SNORA31.15-201ENST00000516771 132 ntBASIC2.84□□□□□ -1.95
SNX2O60749 RNU1-104P-201ENST00000517280 175 ntBASIC2.84□□□□□ -1.95
SNX2O60749 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SNX2O60749 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.84□□□□□ -1.95
SNX2O60749 AC021231.3-201ENST00000558497 370 ntBASIC2.84□□□□□ -1.95
SNX2O60749 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.84□□□□□ -1.95
SNX2O60749 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.84□□□□□ -1.95
SNX2O60749 MIR4446-201ENST00000578505 67 ntBASIC2.84□□□□□ -1.95
SNX2O60749 AL033523.1-201ENST00000605153 153 ntBASIC2.84□□□□□ -1.95
SNX2O60749 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.84□□□□□ -1.95
SNX2O60749 AL606534.2-204ENST00000635008 178 ntBASIC2.84□□□□□ -1.95
SNX2O60749 MIR4272-201ENST00000635924 64 ntBASIC2.84□□□□□ -1.95
SNX2O60749 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.84□□□□□ -1.95
SNX2O60749 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SNX2O60749 SNORA18.3-201ENST00000384122 132 ntBASIC2.83□□□□□ -1.96
SNX2O60749 RNU6-17P-201ENST00000384245 107 ntBASIC2.83□□□□□ -1.96
SNX2O60749 RNU6-18P-201ENST00000384527 107 ntBASIC2.83□□□□□ -1.96
SNX2O60749 RNU6-851P-201ENST00000384565 107 ntBASIC2.83□□□□□ -1.96
SNX2O60749 MIR625-201ENST00000385047 85 ntBASIC2.83□□□□□ -1.96
SNX2O60749 MTCYBP2-201ENST00000407745 171 ntBASIC2.83□□□□□ -1.96
SNX2O60749 SNORD88.1-201ENST00000408684 91 ntBASIC2.83□□□□□ -1.96
SNX2O60749 AC113618.1-201ENST00000416747 285 ntBASIC2.83□□□□□ -1.96
SNX2O60749 AC012306.1-201ENST00000423267 114 ntBASIC2.83□□□□□ -1.96
SNX2O60749 AL161788.1-201ENST00000441805 169 ntBASIC2.83□□□□□ -1.96
SNX2O60749 AL135938.1-201ENST00000443141 297 ntBASIC2.83□□□□□ -1.96
SNX2O60749 OR2AQ1P-201ENST00000451972 200 ntBASIC2.83□□□□□ -1.96
SNX2O60749 RNA5SP367-201ENST00000516557 118 ntBASIC2.83□□□□□ -1.96
SNX2O60749 RNU7-4P-201ENST00000516961 62 ntBASIC2.83□□□□□ -1.96
SNX2O60749 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.83□□□□□ -1.96
SNX2O60749 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.83□□□□□ -1.96
SNX2O60749 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.83□□□□□ -1.96
SNX2O60749 MIR4680-201ENST00000580906 66 ntBASIC2.83□□□□□ -1.96
SNX2O60749 7SK.7-201ENST00000603504 247 ntBASIC2.83□□□□□ -1.96
SNX2O60749 AC104695.3-201ENST00000604052 296 ntBASIC2.83□□□□□ -1.96
SNX2O60749 AC100812.1-201ENST00000607622 580 ntBASIC2.83□□□□□ -1.96
SNX2O60749 AC090115.4-201ENST00000609970 188 ntBASIC2.83□□□□□ -1.96
SNX2O60749 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.83□□□□□ -1.96
SNX2O60749 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SNX2O60749 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.83□□□□□ -1.96
SNX2O60749 Z82209.1-201ENST00000422141 2135 ntBASIC2.83□□□□□ -1.96
SNX2O60749 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SNX2O60749 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
SNX2O60749 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.82□□□□□ -1.96
SNX2O60749 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.82□□□□□ -1.96
SNX2O60749 RNU6-222P-201ENST00000362438 107 ntBASIC2.82□□□□□ -1.96
SNX2O60749 RNU6-655P-201ENST00000362858 107 ntBASIC2.82□□□□□ -1.96
SNX2O60749 Y_RNA.111-201ENST00000363248 100 ntBASIC2.82□□□□□ -1.96
SNX2O60749 Y_RNA.358-201ENST00000365491 99 ntBASIC2.82□□□□□ -1.96
SNX2O60749 RNU6-639P-201ENST00000384074 107 ntBASIC2.82□□□□□ -1.96
SNX2O60749 RNU1-52P-201ENST00000384190 164 ntBASIC2.82□□□□□ -1.96
SNX2O60749 RNU6-738P-201ENST00000384531 106 ntBASIC2.82□□□□□ -1.96
SNX2O60749 RNU6-1160P-201ENST00000384546 104 ntBASIC2.82□□□□□ -1.96
SNX2O60749 MIR181A2-201ENST00000384863 110 ntBASIC2.82□□□□□ -1.96
SNX2O60749 Y_RNA.605-201ENST00000410577 105 ntBASIC2.82□□□□□ -1.96
SNX2O60749 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SNX2O60749 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.82□□□□□ -1.96
SNX2O60749 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.82□□□□□ -1.96
SNX2O60749 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.82□□□□□ -1.96
SNX2O60749 AL139109.1-201ENST00000455491 297 ntBASIC2.82□□□□□ -1.96
SNX2O60749 RNU7-87P-201ENST00000459343 62 ntBASIC2.82□□□□□ -1.96
SNX2O60749 AC140059.1-201ENST00000489238 361 ntBASIC2.82□□□□□ -1.96
SNX2O60749 RNU6-327P-201ENST00000516270 127 ntBASIC2.82□□□□□ -1.96
SNX2O60749 Y_RNA.706-201ENST00000516933 99 ntBASIC2.82□□□□□ -1.96
SNX2O60749 CBX3P7-201ENST00000532876 502 ntBASIC2.82□□□□□ -1.96
SNX2O60749 AC006504.6-201ENST00000590142 199 ntBASIC2.82□□□□□ -1.96
SNX2O60749 AL355297.2-201ENST00000604792 129 ntBASIC2.82□□□□□ -1.96
SNX2O60749 AL034555.1-201ENST00000604816 211 ntBASIC2.82□□□□□ -1.96
SNX2O60749 AC116312.1-201ENST00000606841 314 ntBASIC2.82□□□□□ -1.96
SNX2O60749 RMST_6.1-201ENST00000611980 203 ntBASIC2.82□□□□□ -1.96
SNX2O60749 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.82□□□□□ -1.96
SNX2O60749 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SNX2O60749 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms