Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AC112220.1-201ENST00000434628 355 ntBASIC2.37□□□□□ -2.03
LMX1BO60663 RPEP5-201ENST00000441137 268 ntBASIC2.37□□□□□ -2.03
LMX1BO60663 OSTCP8-201ENST00000445117 448 ntBASIC2.37□□□□□ -2.03
LMX1BO60663 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.37□□□□□ -2.03
LMX1BO60663 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.37□□□□□ -2.03
LMX1BO60663 AC006026.2-201ENST00000457376 180 ntBASIC2.37□□□□□ -2.03
LMX1BO60663 snoU13.30-201ENST00000458951 104 ntBASIC2.37□□□□□ -2.03
LMX1BO60663 RPL21P39-201ENST00000463605 483 ntBASIC2.37□□□□□ -2.03
LMX1BO60663 AC090525.1-201ENST00000479116 478 ntBASIC2.37□□□□□ -2.03
LMX1BO60663 AC087190.1-201ENST00000484462 480 ntBASIC2.37□□□□□ -2.03
LMX1BO60663 AC107032.1-201ENST00000485945 480 ntBASIC2.37□□□□□ -2.03
LMX1BO60663 AC132942.1-201ENST00000486753 483 ntBASIC2.37□□□□□ -2.03
LMX1BO60663 AC093591.1-201ENST00000491435 481 ntBASIC2.37□□□□□ -2.03
LMX1BO60663 RPL21P16-201ENST00000495531 483 ntBASIC2.37□□□□□ -2.03
LMX1BO60663 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.37□□□□□ -2.03
LMX1BO60663 SNORA25.11-201ENST00000515935 105 ntBASIC2.37□□□□□ -2.03
LMX1BO60663 ACA59.2-201ENST00000517061 156 ntBASIC2.37□□□□□ -2.03
LMX1BO60663 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.37□□□□□ -2.03
LMX1BO60663 AC034114.1-201ENST00000520293 285 ntBASIC2.37□□□□□ -2.03
LMX1BO60663 CKS1BP7-201ENST00000522230 235 ntBASIC2.37□□□□□ -2.03
LMX1BO60663 AP002770.2-201ENST00000543613 532 ntBASIC2.37□□□□□ -2.03
LMX1BO60663 AC007375.1-201ENST00000554513 578 ntBASIC2.37□□□□□ -2.03
LMX1BO60663 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.37□□□□□ -2.03
LMX1BO60663 MIR5571-201ENST00000577998 113 ntBASIC2.37□□□□□ -2.03
LMX1BO60663 AC091152.3-201ENST00000604227 325 ntBASIC2.37□□□□□ -2.03
LMX1BO60663 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.37□□□□□ -2.03
LMX1BO60663 AC233981.2-201ENST00000611524 1614 ntBASIC2.37□□□□□ -2.03
LMX1BO60663 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
LMX1BO60663 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.37□□□□□ -2.03
LMX1BO60663 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
LMX1BO60663 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LMX1BO60663 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.37□□□□□ -2.03
LMX1BO60663 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
LMX1BO60663 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
LMX1BO60663 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LMX1BO60663 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LMX1BO60663 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LMX1BO60663 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
LMX1BO60663 RNU6-1285P-201ENST00000363480 105 ntBASIC2.36□□□□□ -2.03
LMX1BO60663 RNU1-112P-201ENST00000364401 164 ntBASIC2.36□□□□□ -2.03
LMX1BO60663 RNU4-9P-201ENST00000364951 139 ntBASIC2.36□□□□□ -2.03
LMX1BO60663 RNU6-968P-201ENST00000384076 107 ntBASIC2.36□□□□□ -2.03
LMX1BO60663 Y_RNA.458-201ENST00000384240 102 ntBASIC2.36□□□□□ -2.03
LMX1BO60663 U8.10-201ENST00000384260 133 ntBASIC2.36□□□□□ -2.03
LMX1BO60663 SNORA51.11-201ENST00000384442 131 ntBASIC2.36□□□□□ -2.03
LMX1BO60663 RNU6-1222P-201ENST00000384615 107 ntBASIC2.36□□□□□ -2.03
LMX1BO60663 RNA5SP252-201ENST00000391131 119 ntBASIC2.36□□□□□ -2.03
LMX1BO60663 AC009296.1-201ENST00000443146 155 ntBASIC2.36□□□□□ -2.03
LMX1BO60663 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.36□□□□□ -2.03
LMX1BO60663 TOMM22P6-201ENST00000465035 409 ntBASIC2.36□□□□□ -2.03
LMX1BO60663 RPL30P14-201ENST00000482744 348 ntBASIC2.36□□□□□ -2.03
LMX1BO60663 RNU6-408P-201ENST00000515910 100 ntBASIC2.36□□□□□ -2.03
LMX1BO60663 RNU7-175P-201ENST00000515915 61 ntBASIC2.36□□□□□ -2.03
LMX1BO60663 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.36□□□□□ -2.03
LMX1BO60663 AL442163.3-201ENST00000554110 156 ntBASIC2.36□□□□□ -2.03
LMX1BO60663 AC125232.2-201ENST00000592457 143 ntBASIC2.36□□□□□ -2.03
LMX1BO60663 AC019159.1-201ENST00000605094 187 ntBASIC2.36□□□□□ -2.03
LMX1BO60663 AL356157.2-201ENST00000605122 111 ntBASIC2.36□□□□□ -2.03
LMX1BO60663 AC100812.1-201ENST00000607622 580 ntBASIC2.36□□□□□ -2.03
LMX1BO60663 AC024581.2-201ENST00000619986 252 ntBASIC2.36□□□□□ -2.03
LMX1BO60663 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LMX1BO60663 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
LMX1BO60663 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.36□□□□□ -2.03
LMX1BO60663 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.36□□□□□ -2.03
LMX1BO60663 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LMX1BO60663 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 RNU6-222P-201ENST00000362438 107 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 RNU6-770P-201ENST00000363929 105 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 SNORD115-32-201ENST00000364079 82 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 RNU6-487P-201ENST00000365430 104 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 SNORA36A-201ENST00000384221 132 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 RNU6-198P-201ENST00000384258 104 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 RNU6-611P-201ENST00000384276 104 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 MIR544A-201ENST00000384855 91 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
LMX1BO60663 RNA5SP210-201ENST00000391034 120 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 RNU6-1140P-201ENST00000410517 106 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.35□□□□□ -2.03
LMX1BO60663 MTCO3P19-201ENST00000415864 321 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 AL365496.1-201ENST00000426885 215 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 ARL5AP4-201ENST00000430731 512 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 AC108059.2-201ENST00000434626 151 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 AC004383.1-201ENST00000438135 289 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 AL161651.1-201ENST00000440882 223 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 PCNPP5-201ENST00000452246 481 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 AP000705.1-201ENST00000454567 350 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 LINC01399-202ENST00000458450 244 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 RNU7-23P-201ENST00000459465 62 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 RN7SL499P-201ENST00000481141 276 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 ANXA2P1-201ENST00000505539 926 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 MTND1P19-201ENST00000511780 315 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 RNU6-397P-201ENST00000516226 104 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 AC091544.4-201ENST00000555268 342 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.35□□□□□ -2.03
LMX1BO60663 AC090897.2-201ENST00000581715 130 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 AL078605.1-201ENST00000603529 500 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.35□□□□□ -2.03
LMX1BO60663 AC243829.7-201ENST00000633081 225 ntBASIC2.35□□□□□ -2.03
LMX1BO60663 MIR3529-201ENST00000637713 78 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms