Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 MIR1294-201ENST00000408503 142 ntBASIC2.19□□□□□ -2.06
SSX4O60224 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.19□□□□□ -2.06
SSX4O60224 Y_RNA.594-201ENST00000410373 140 ntBASIC2.19□□□□□ -2.06
SSX4O60224 RNU6-1050P-201ENST00000410388 107 ntBASIC2.19□□□□□ -2.06
SSX4O60224 AL358453.1-201ENST00000422522 250 ntBASIC2.19□□□□□ -2.06
SSX4O60224 MTATP6P23-201ENST00000440153 476 ntBASIC2.19□□□□□ -2.06
SSX4O60224 AC011816.1-201ENST00000441346 546 ntBASIC2.19□□□□□ -2.06
SSX4O60224 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.19□□□□□ -2.06
SSX4O60224 AC087477.1-201ENST00000465747 340 ntBASIC2.19□□□□□ -2.06
SSX4O60224 RNU6-507P-201ENST00000516045 100 ntBASIC2.19□□□□□ -2.06
SSX4O60224 Y_RNA.670-201ENST00000516255 105 ntBASIC2.19□□□□□ -2.06
SSX4O60224 RNU6-875P-201ENST00000516488 106 ntBASIC2.19□□□□□ -2.06
SSX4O60224 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.19□□□□□ -2.06
SSX4O60224 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.19□□□□□ -2.06
SSX4O60224 EIF4A1P12-201ENST00000551910 141 ntBASIC2.19□□□□□ -2.06
SSX4O60224 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.19□□□□□ -2.06
SSX4O60224 MIR5696-201ENST00000578474 85 ntBASIC2.19□□□□□ -2.06
SSX4O60224 SNORD14A-201ENST00000606526 91 ntBASIC2.19□□□□□ -2.06
SSX4O60224 AC009994.1-201ENST00000606889 253 ntBASIC2.19□□□□□ -2.06
SSX4O60224 AL132822.1-201ENST00000617063 513 ntBASIC2.19□□□□□ -2.06
SSX4O60224 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.19□□□□□ -2.06
SSX4O60224 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.19□□□□□ -2.06
SSX4O60224 AC099654.5-201ENST00000636479 350 ntBASIC2.19□□□□□ -2.06
SSX4O60224 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SSX4O60224 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.19□□□□□ -2.06
SSX4O60224 MIR21-201ENST00000362134 72 ntBASIC2.18□□□□□ -2.06
SSX4O60224 Y_RNA.533-201ENST00000384596 114 ntBASIC2.18□□□□□ -2.06
SSX4O60224 MTND4LP11-201ENST00000422184 280 ntBASIC2.18□□□□□ -2.06
SSX4O60224 AL121890.1-201ENST00000435457 205 ntBASIC2.18□□□□□ -2.06
SSX4O60224 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.18□□□□□ -2.06
SSX4O60224 Y_RNA.635-201ENST00000459041 101 ntBASIC2.18□□□□□ -2.06
SSX4O60224 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.18□□□□□ -2.06
SSX4O60224 Y_RNA.702-201ENST00000516843 96 ntBASIC2.18□□□□□ -2.06
SSX4O60224 AC034114.1-201ENST00000520293 285 ntBASIC2.18□□□□□ -2.06
SSX4O60224 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.18□□□□□ -2.06
SSX4O60224 AC009127.3-201ENST00000570531 403 ntBASIC2.18□□□□□ -2.06
SSX4O60224 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.18□□□□□ -2.06
SSX4O60224 AL158827.2-201ENST00000602494 330 ntBASIC2.18□□□□□ -2.06
SSX4O60224 AC016727.1-205ENST00000605437 569 ntBASIC2.18□□□□□ -2.06
SSX4O60224 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.18□□□□□ -2.06
SSX4O60224 AC104260.1-201ENST00000616660 539 ntBASIC2.18□□□□□ -2.06
SSX4O60224 CTSLP2-204ENST00000629029 392 ntBASIC2.18□□□□□ -2.06
SSX4O60224 SCARNA4-201ENST00000629045 128 ntBASIC2.18□□□□□ -2.06
SSX4O60224 MIR1248-201ENST00000629190 106 ntBASIC2.18□□□□□ -2.06
SSX4O60224 AL691447.3-201ENST00000635020 330 ntBASIC2.18□□□□□ -2.06
SSX4O60224 AP000553.5-201ENST00000641933 54 ntBASIC2.18□□□□□ -2.06
SSX4O60224 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SSX4O60224 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
SSX4O60224 Y_RNA.2-201ENST00000362330 96 ntBASIC2.17□□□□□ -2.06
SSX4O60224 Y_RNA.48-201ENST00000362710 103 ntBASIC2.17□□□□□ -2.06
SSX4O60224 RNU6-743P-201ENST00000364151 106 ntBASIC2.17□□□□□ -2.06
SSX4O60224 Y_RNA.474-201ENST00000384341 102 ntBASIC2.17□□□□□ -2.06
SSX4O60224 SNORA51.11-201ENST00000384442 131 ntBASIC2.17□□□□□ -2.06
SSX4O60224 AC009963.1-201ENST00000417265 157 ntBASIC2.17□□□□□ -2.06
SSX4O60224 Z82188.1-201ENST00000436709 154 ntBASIC2.17□□□□□ -2.06
SSX4O60224 OR2AQ1P-201ENST00000451972 200 ntBASIC2.17□□□□□ -2.06
SSX4O60224 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.17□□□□□ -2.06
SSX4O60224 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.17□□□□□ -2.06
SSX4O60224 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.17□□□□□ -2.06
SSX4O60224 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.17□□□□□ -2.06
SSX4O60224 RNA5SP320-201ENST00000516263 124 ntBASIC2.17□□□□□ -2.06
SSX4O60224 Y_RNA.708-201ENST00000516950 96 ntBASIC2.17□□□□□ -2.06
SSX4O60224 NDUFA5P6-201ENST00000542110 379 ntBASIC2.17□□□□□ -2.06
SSX4O60224 AC121758.2-201ENST00000553271 193 ntBASIC2.17□□□□□ -2.06
SSX4O60224 AC010928.2-201ENST00000588017 287 ntBASIC2.17□□□□□ -2.06
SSX4O60224 AP000654.2-201ENST00000605633 586 ntBASIC2.17□□□□□ -2.06
SSX4O60224 AC009229.3-201ENST00000608056 282 ntBASIC2.17□□□□□ -2.06
SSX4O60224 AC022202.1-201ENST00000613515 211 ntBASIC2.17□□□□□ -2.06
SSX4O60224 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.17□□□□□ -2.06
SSX4O60224 U4.3-201ENST00000621047 82 ntBASIC2.17□□□□□ -2.06
SSX4O60224 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SSX4O60224 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SSX4O60224 RNU6-1159P-201ENST00000362933 107 ntBASIC2.16□□□□□ -2.06
SSX4O60224 SNORD114-30-201ENST00000364448 72 ntBASIC2.16□□□□□ -2.06
SSX4O60224 RNU4-9P-201ENST00000364951 139 ntBASIC2.16□□□□□ -2.06
SSX4O60224 RNU6-26P-201ENST00000383985 107 ntBASIC2.16□□□□□ -2.06
SSX4O60224 RNU6-611P-201ENST00000384276 104 ntBASIC2.16□□□□□ -2.06
SSX4O60224 MIR27B-201ENST00000385129 97 ntBASIC2.16□□□□□ -2.06
SSX4O60224 RPS26P42-201ENST00000413485 326 ntBASIC2.16□□□□□ -2.06
SSX4O60224 AC243428.1-201ENST00000421099 264 ntBASIC2.16□□□□□ -2.06
SSX4O60224 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.16□□□□□ -2.06
SSX4O60224 RPL7P42-201ENST00000481005 679 ntBASIC2.16□□□□□ -2.06
SSX4O60224 AC107032.1-201ENST00000485945 480 ntBASIC2.16□□□□□ -2.06
SSX4O60224 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.16□□□□□ -2.06
SSX4O60224 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.16□□□□□ -2.06
SSX4O60224 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.16□□□□□ -2.06
SSX4O60224 MIR3126-201ENST00000577443 74 ntBASIC2.16□□□□□ -2.06
SSX4O60224 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.16□□□□□ -2.06
SSX4O60224 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.16□□□□□ -2.06
SSX4O60224 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.16□□□□□ -2.06
SSX4O60224 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
SSX4O60224 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SSX4O60224 KPNA2P1-201ENST00000458289 1591 ntBASIC2.15□□□□□ -2.06
SSX4O60224 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
SSX4O60224 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
SSX4O60224 SNORA3A-201ENST00000364113 130 ntBASIC2.15□□□□□ -2.07
SSX4O60224 Y_RNA.404-201ENST00000383978 102 ntBASIC2.15□□□□□ -2.07
SSX4O60224 SNORA67.4-201ENST00000384688 142 ntBASIC2.15□□□□□ -2.07
SSX4O60224 RNU6-1009P-201ENST00000390996 107 ntBASIC2.15□□□□□ -2.07
SSX4O60224 SNORA75.4-201ENST00000391278 119 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms