Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 AC097463.2-201ENST00000421074 142 ntBASIC2.94□□□□□ -1.94
HOXA3O43365 AL159169.1-201ENST00000421119 127 ntBASIC2.94□□□□□ -1.94
HOXA3O43365 AC009414.1-201ENST00000427200 443 ntBASIC2.94□□□□□ -1.94
HOXA3O43365 AC091179.1-201ENST00000461606 579 ntBASIC2.94□□□□□ -1.94
HOXA3O43365 COX6CP14-201ENST00000469580 174 ntBASIC2.94□□□□□ -1.94
HOXA3O43365 RNU6-711P-201ENST00000517255 106 ntBASIC2.94□□□□□ -1.94
HOXA3O43365 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.94□□□□□ -1.94
HOXA3O43365 AC024405.2-202ENST00000532731 184 ntBASIC2.94□□□□□ -1.94
HOXA3O43365 AP002001.1-203ENST00000534002 267 ntBASIC2.94□□□□□ -1.94
HOXA3O43365 AC008011.1-201ENST00000545989 227 ntBASIC2.94□□□□□ -1.94
HOXA3O43365 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXA3O43365 TGIF1P1-201ENST00000558095 802 ntBASIC2.94□□□□□ -1.94
HOXA3O43365 AC027176.1-201ENST00000560204 514 ntBASIC2.94□□□□□ -1.94
HOXA3O43365 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.94□□□□□ -1.94
HOXA3O43365 MIR4282-201ENST00000583613 67 ntBASIC2.94□□□□□ -1.94
HOXA3O43365 AC011471.1-201ENST00000585766 187 ntBASIC2.94□□□□□ -1.94
HOXA3O43365 AC092628.2-201ENST00000622492 339 ntBASIC2.94□□□□□ -1.94
HOXA3O43365 AP000553.6-201ENST00000641242 118 ntBASIC2.94□□□□□ -1.94
HOXA3O43365 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HOXA3O43365 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.94□□□□□ -1.94
HOXA3O43365 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.94□□□□□ -1.94
HOXA3O43365 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
HOXA3O43365 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HOXA3O43365 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.93□□□□□ -1.94
HOXA3O43365 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HOXA3O43365 Y_RNA.82-201ENST00000363000 102 ntBASIC2.93□□□□□ -1.94
HOXA3O43365 Y_RNA.92-201ENST00000363043 102 ntBASIC2.93□□□□□ -1.94
HOXA3O43365 Y_RNA.235-201ENST00000364412 102 ntBASIC2.93□□□□□ -1.94
HOXA3O43365 Y_RNA.306-201ENST00000365015 102 ntBASIC2.93□□□□□ -1.94
HOXA3O43365 Y_RNA.312-201ENST00000365089 102 ntBASIC2.93□□□□□ -1.94
HOXA3O43365 Y_RNA.322-201ENST00000365151 102 ntBASIC2.93□□□□□ -1.94
HOXA3O43365 SNORA9-201ENST00000384215 133 ntBASIC2.93□□□□□ -1.94
HOXA3O43365 RNU6-886P-201ENST00000384319 105 ntBASIC2.93□□□□□ -1.94
HOXA3O43365 HMGN2P8-201ENST00000391458 268 ntBASIC2.93□□□□□ -1.94
HOXA3O43365 RNU2-54P-201ENST00000410299 190 ntBASIC2.93□□□□□ -1.94
HOXA3O43365 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.93□□□□□ -1.94
HOXA3O43365 Y_RNA.650-201ENST00000459002 102 ntBASIC2.93□□□□□ -1.94
HOXA3O43365 Y_RNA.638-201ENST00000459374 113 ntBASIC2.93□□□□□ -1.94
HOXA3O43365 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.93□□□□□ -1.94
HOXA3O43365 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.93□□□□□ -1.94
HOXA3O43365 AC107393.1-201ENST00000512403 346 ntBASIC2.93□□□□□ -1.94
HOXA3O43365 RNU6-344P-201ENST00000516635 111 ntBASIC2.93□□□□□ -1.94
HOXA3O43365 RNU6-107P-201ENST00000516643 102 ntBASIC2.93□□□□□ -1.94
HOXA3O43365 RNU2-44P-201ENST00000516795 194 ntBASIC2.93□□□□□ -1.94
HOXA3O43365 Y_RNA.777-201ENST00000516982 102 ntBASIC2.93□□□□□ -1.94
HOXA3O43365 HSPE1P18-201ENST00000517602 280 ntBASIC2.93□□□□□ -1.94
HOXA3O43365 DEFB131C-201ENST00000528817 165 ntBASIC2.93□□□□□ -1.94
HOXA3O43365 MIR5006-201ENST00000583027 110 ntBASIC2.93□□□□□ -1.94
HOXA3O43365 Y_RNA.771-201ENST00000598668 102 ntBASIC2.93□□□□□ -1.94
HOXA3O43365 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.93□□□□□ -1.94
HOXA3O43365 Y_RNA.789-201ENST00000622480 102 ntBASIC2.93□□□□□ -1.94
HOXA3O43365 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HOXA3O43365 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.93□□□□□ -1.94
HOXA3O43365 AC026241.1-201ENST00000517873 2142 ntBASIC2.93□□□□□ -1.94
HOXA3O43365 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HOXA3O43365 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HOXA3O43365 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC2.93□□□□□ -1.94
HOXA3O43365 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
HOXA3O43365 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HOXA3O43365 AC006504.1-201ENST00000562493 3666 ntBASIC2.92□□□□□ -1.94
HOXA3O43365 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
HOXA3O43365 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXA3O43365 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.92□□□□□ -1.94
HOXA3O43365 RNU1-18P-201ENST00000363062 164 ntBASIC2.92□□□□□ -1.94
HOXA3O43365 RNU6-662P-201ENST00000384253 104 ntBASIC2.92□□□□□ -1.94
HOXA3O43365 MIR490-201ENST00000384865 128 ntBASIC2.92□□□□□ -1.94
HOXA3O43365 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.92□□□□□ -1.94
HOXA3O43365 AC009963.1-201ENST00000417265 157 ntBASIC2.92□□□□□ -1.94
HOXA3O43365 CYCSP4-201ENST00000429682 331 ntBASIC2.92□□□□□ -1.94
HOXA3O43365 AC009237.7-201ENST00000447357 229 ntBASIC2.92□□□□□ -1.94
HOXA3O43365 RPL23AP62-201ENST00000463396 453 ntBASIC2.92□□□□□ -1.94
HOXA3O43365 RPL21P10-201ENST00000463521 490 ntBASIC2.92□□□□□ -1.94
HOXA3O43365 RNU6-155P-201ENST00000516347 100 ntBASIC2.92□□□□□ -1.94
HOXA3O43365 RNU6-1231P-201ENST00000517185 103 ntBASIC2.92□□□□□ -1.94
HOXA3O43365 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXA3O43365 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXA3O43365 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.92□□□□□ -1.94
HOXA3O43365 MIR3145-201ENST00000580727 82 ntBASIC2.92□□□□□ -1.94
HOXA3O43365 AC011921.3-201ENST00000605540 361 ntBASIC2.92□□□□□ -1.94
HOXA3O43365 AC005828.6-201ENST00000606610 232 ntBASIC2.92□□□□□ -1.94
HOXA3O43365 MIR7851-201ENST00000610611 160 ntBASIC2.92□□□□□ -1.94
HOXA3O43365 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.92□□□□□ -1.94
HOXA3O43365 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.92□□□□□ -1.94
HOXA3O43365 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
HOXA3O43365 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.91□□□□□ -1.94
HOXA3O43365 AL359854.1-201ENST00000614203 1594 ntBASIC2.91□□□□□ -1.94
HOXA3O43365 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.91□□□□□ -1.94
HOXA3O43365 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HOXA3O43365 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HOXA3O43365 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HOXA3O43365 SNORD87-201ENST00000364849 89 ntBASIC2.91□□□□□ -1.94
HOXA3O43365 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.91□□□□□ -1.94
HOXA3O43365 AC104332.1-201ENST00000440471 797 ntBASIC2.91□□□□□ -1.94
HOXA3O43365 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXA3O43365 RNU7-120P-201ENST00000459334 63 ntBASIC2.91□□□□□ -1.94
HOXA3O43365 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.91□□□□□ -1.94
HOXA3O43365 TRBV12-2-201ENST00000489763 344 ntBASIC2.91□□□□□ -1.94
HOXA3O43365 SNORA70.14-201ENST00000516205 110 ntBASIC2.91□□□□□ -1.94
HOXA3O43365 RNU6-191P-201ENST00000516295 94 ntBASIC2.91□□□□□ -1.94
HOXA3O43365 SNORA74D-201ENST00000516404 141 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms