Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.21□□□□□ -2.06
TO15178 AC234781.5-201ENST00000508429 271 ntBASIC2.21□□□□□ -2.06
TO15178 AC026436.1-201ENST00000510537 270 ntBASIC2.21□□□□□ -2.06
TO15178 HSPE1P18-201ENST00000517602 280 ntBASIC2.21□□□□□ -2.06
TO15178 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.21□□□□□ -2.06
TO15178 AC022616.8-201ENST00000533569 253 ntBASIC2.21□□□□□ -2.06
TO15178 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.21□□□□□ -2.06
TO15178 EIF4A1P12-201ENST00000551910 141 ntBASIC2.21□□□□□ -2.06
TO15178 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.21□□□□□ -2.06
TO15178 MIR5696-201ENST00000578474 85 ntBASIC2.21□□□□□ -2.06
TO15178 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.21□□□□□ -2.06
TO15178 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
TO15178 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TO15178 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
TO15178 RNU6-1059P-201ENST00000363752 98 ntBASIC2.2□□□□□ -2.06
TO15178 SNORD32B-201ENST00000364460 84 ntBASIC2.2□□□□□ -2.06
TO15178 SNORA25B-201ENST00000365507 128 ntBASIC2.2□□□□□ -2.06
TO15178 RNU6-842P-201ENST00000384269 107 ntBASIC2.2□□□□□ -2.06
TO15178 RNU6-378P-201ENST00000384324 107 ntBASIC2.2□□□□□ -2.06
TO15178 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.2□□□□□ -2.06
TO15178 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.2□□□□□ -2.06
TO15178 AC087477.1-201ENST00000465747 340 ntBASIC2.2□□□□□ -2.06
TO15178 MTND4P17-201ENST00000470444 350 ntBASIC2.2□□□□□ -2.06
TO15178 AC132942.1-201ENST00000486753 483 ntBASIC2.2□□□□□ -2.06
TO15178 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.2□□□□□ -2.06
TO15178 AC113139.1-201ENST00000605049 239 ntBASIC2.2□□□□□ -2.06
TO15178 AC016727.1-205ENST00000605437 569 ntBASIC2.2□□□□□ -2.06
TO15178 SCARNA4-201ENST00000629045 128 ntBASIC2.2□□□□□ -2.06
TO15178 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
TO15178 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.2□□□□□ -2.06
TO15178 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.2□□□□□ -2.06
TO15178 Y_RNA.2-201ENST00000362330 96 ntBASIC2.19□□□□□ -2.06
TO15178 SNORD114-30-201ENST00000364448 72 ntBASIC2.19□□□□□ -2.06
TO15178 Y_RNA.263-201ENST00000364659 114 ntBASIC2.19□□□□□ -2.06
TO15178 RNU6-1093P-201ENST00000391194 107 ntBASIC2.19□□□□□ -2.06
TO15178 RPS26P42-201ENST00000413485 326 ntBASIC2.19□□□□□ -2.06
TO15178 snoU13.6-201ENST00000458785 104 ntBASIC2.19□□□□□ -2.06
TO15178 AF186996.7-201ENST00000492781 209 ntBASIC2.19□□□□□ -2.06
TO15178 RN7SL636P-201ENST00000497504 294 ntBASIC2.19□□□□□ -2.06
TO15178 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.19□□□□□ -2.06
TO15178 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.19□□□□□ -2.06
TO15178 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.19□□□□□ -2.06
TO15178 RNU6-507P-201ENST00000516045 100 ntBASIC2.19□□□□□ -2.06
TO15178 Y_RNA.670-201ENST00000516255 105 ntBASIC2.19□□□□□ -2.06
TO15178 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.19□□□□□ -2.06
TO15178 AP000889.1-201ENST00000530968 660 ntBASIC2.19□□□□□ -2.06
TO15178 AC021269.2-201ENST00000532318 330 ntBASIC2.19□□□□□ -2.06
TO15178 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.19□□□□□ -2.06
TO15178 MIR4529-201ENST00000578110 78 ntBASIC2.19□□□□□ -2.06
TO15178 MIR5007-201ENST00000583098 95 ntBASIC2.19□□□□□ -2.06
TO15178 AP000654.2-201ENST00000605633 586 ntBASIC2.19□□□□□ -2.06
TO15178 AC009994.1-201ENST00000606889 253 ntBASIC2.19□□□□□ -2.06
TO15178 AC009229.3-201ENST00000608056 282 ntBASIC2.19□□□□□ -2.06
TO15178 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.19□□□□□ -2.06
TO15178 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.19□□□□□ -2.06
TO15178 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TO15178 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TO15178 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
TO15178 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
TO15178 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
TO15178 MIR21-201ENST00000362134 72 ntBASIC2.18□□□□□ -2.06
TO15178 SNORA16B-201ENST00000364674 135 ntBASIC2.18□□□□□ -2.06
TO15178 Y_RNA.474-201ENST00000384341 102 ntBASIC2.18□□□□□ -2.06
TO15178 Y_RNA.490-201ENST00000384413 102 ntBASIC2.18□□□□□ -2.06
TO15178 Y_RNA.500-201ENST00000384466 111 ntBASIC2.18□□□□□ -2.06
TO15178 Y_RNA.533-201ENST00000384596 114 ntBASIC2.18□□□□□ -2.06
TO15178 MIR17-201ENST00000385012 84 ntBASIC2.18□□□□□ -2.06
TO15178 SNORA12-201ENST00000391162 147 ntBASIC2.18□□□□□ -2.06
TO15178 U3.40-201ENST00000408706 208 ntBASIC2.18□□□□□ -2.06
TO15178 AL358453.1-201ENST00000422522 250 ntBASIC2.18□□□□□ -2.06
TO15178 OR2AQ1P-201ENST00000451972 200 ntBASIC2.18□□□□□ -2.06
TO15178 RN7SKP210-201ENST00000459176 261 ntBASIC2.18□□□□□ -2.06
TO15178 UBE2DNL-203ENST00000474922 222 ntBASIC2.18□□□□□ -2.06
TO15178 RPS27P21-201ENST00000486977 252 ntBASIC2.18□□□□□ -2.06
TO15178 FGF7P4-201ENST00000509595 295 ntBASIC2.18□□□□□ -2.06
TO15178 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.18□□□□□ -2.06
TO15178 RNU6-307P-201ENST00000516743 106 ntBASIC2.18□□□□□ -2.06
TO15178 AC134698.4-201ENST00000523451 826 ntBASIC2.18□□□□□ -2.06
TO15178 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.18□□□□□ -2.06
TO15178 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.18□□□□□ -2.06
TO15178 MIR5690-201ENST00000583739 73 ntBASIC2.18□□□□□ -2.06
TO15178 AC005899.2-201ENST00000584353 90 ntBASIC2.18□□□□□ -2.06
TO15178 RPL17P51-201ENST00000605218 238 ntBASIC2.18□□□□□ -2.06
TO15178 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.18□□□□□ -2.06
TO15178 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.18□□□□□ -2.06
TO15178 ZNF299P-201ENST00000406845 1804 ntBASIC2.18□□□□□ -2.06
TO15178 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TO15178 Y_RNA.384-201ENST00000383909 102 ntBASIC2.17□□□□□ -2.06
TO15178 Y_RNA.387-201ENST00000383918 102 ntBASIC2.17□□□□□ -2.06
TO15178 RNU6-26P-201ENST00000383985 107 ntBASIC2.17□□□□□ -2.06
TO15178 RNU6-611P-201ENST00000384276 104 ntBASIC2.17□□□□□ -2.06
TO15178 Y_RNA.473-201ENST00000384333 102 ntBASIC2.17□□□□□ -2.06
TO15178 SNORA75.4-201ENST00000391278 119 ntBASIC2.17□□□□□ -2.06
TO15178 RNU4-14P-201ENST00000410858 122 ntBASIC2.17□□□□□ -2.06
TO15178 RNU6-370P-201ENST00000411008 104 ntBASIC2.17□□□□□ -2.06
TO15178 AC243428.1-201ENST00000421099 264 ntBASIC2.17□□□□□ -2.06
TO15178 USMG5P1-201ENST00000425964 177 ntBASIC2.17□□□□□ -2.06
TO15178 AC055731.1-201ENST00000474387 401 ntBASIC2.17□□□□□ -2.06
TO15178 AC107032.1-201ENST00000485945 480 ntBASIC2.17□□□□□ -2.06
TO15178 AC018868.1-201ENST00000491307 315 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms