Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC010486.3-201ENST00000511602 785 ntBASIC1.9□□□□□ -2.11
CUX2O14529 RN7SKP298-201ENST00000515950 94 ntBASIC1.9□□□□□ -2.11
CUX2O14529 Y_RNA.688-201ENST00000516565 95 ntBASIC1.9□□□□□ -2.11
CUX2O14529 RNU6-430P-201ENST00000517078 107 ntBASIC1.9□□□□□ -2.11
CUX2O14529 AC007684.1-201ENST00000609671 477 ntBASIC1.9□□□□□ -2.11
CUX2O14529 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CUX2O14529 AL132822.1-201ENST00000617063 513 ntBASIC1.9□□□□□ -2.11
CUX2O14529 AC005609.4-201ENST00000625071 447 ntBASIC1.9□□□□□ -2.11
CUX2O14529 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CUX2O14529 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.9□□□□□ -2.11
CUX2O14529 AC245060.5-201ENST00000610778 3293 ntBASIC1.9□□□□□ -2.11
CUX2O14529 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CUX2O14529 RNU6-1303P-201ENST00000364841 107 ntBASIC1.89□□□□□ -2.11
CUX2O14529 Y_RNA.296-201ENST00000364930 108 ntBASIC1.89□□□□□ -2.11
CUX2O14529 RNU5A-6P-201ENST00000384136 116 ntBASIC1.89□□□□□ -2.11
CUX2O14529 RNU6-517P-201ENST00000384362 110 ntBASIC1.89□□□□□ -2.11
CUX2O14529 MIR518A2-201ENST00000384966 87 ntBASIC1.89□□□□□ -2.11
CUX2O14529 MIR532-201ENST00000385025 91 ntBASIC1.89□□□□□ -2.11
CUX2O14529 MIR936-201ENST00000401264 98 ntBASIC1.89□□□□□ -2.11
CUX2O14529 AL512604.1-201ENST00000404812 257 ntBASIC1.89□□□□□ -2.11
CUX2O14529 RNU2-48P-201ENST00000410694 191 ntBASIC1.89□□□□□ -2.11
CUX2O14529 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.89□□□□□ -2.11
CUX2O14529 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.89□□□□□ -2.11
CUX2O14529 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.89□□□□□ -2.11
CUX2O14529 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.89□□□□□ -2.11
CUX2O14529 RPS3AP17-201ENST00000472594 777 ntBASIC1.89□□□□□ -2.11
CUX2O14529 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.89□□□□□ -2.11
CUX2O14529 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.89□□□□□ -2.11
CUX2O14529 RNU2-69P-201ENST00000516061 100 ntBASIC1.89□□□□□ -2.11
CUX2O14529 AC069113.1-201ENST00000517763 267 ntBASIC1.89□□□□□ -2.11
CUX2O14529 CYCSP27-201ENST00000527643 293 ntBASIC1.89□□□□□ -2.11
CUX2O14529 AL356057.1-201ENST00000533798 831 ntBASIC1.89□□□□□ -2.11
CUX2O14529 AC006362.1-201ENST00000567392 174 ntBASIC1.89□□□□□ -2.11
CUX2O14529 AC107304.1-201ENST00000604229 296 ntBASIC1.89□□□□□ -2.11
CUX2O14529 AC108706.1-201ENST00000611053 297 ntBASIC1.89□□□□□ -2.11
CUX2O14529 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.89□□□□□ -2.11
CUX2O14529 AL359314.1-201ENST00000616913 261 ntBASIC1.89□□□□□ -2.11
CUX2O14529 MIR2909-201ENST00000617113 69 ntBASIC1.89□□□□□ -2.11
CUX2O14529 AC008555.8-201ENST00000623602 2168 ntBASIC1.89□□□□□ -2.11
CUX2O14529 RNU6-428P-201ENST00000362942 107 ntBASIC1.88□□□□□ -2.11
CUX2O14529 MIR29C-201ENST00000385231 88 ntBASIC1.88□□□□□ -2.11
CUX2O14529 RNU6-1106P-201ENST00000390845 107 ntBASIC1.88□□□□□ -2.11
CUX2O14529 RNA5SP212-201ENST00000391223 107 ntBASIC1.88□□□□□ -2.11
CUX2O14529 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.88□□□□□ -2.11
CUX2O14529 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.88□□□□□ -2.11
CUX2O14529 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.88□□□□□ -2.11
CUX2O14529 AC096920.1-201ENST00000423991 241 ntBASIC1.88□□□□□ -2.11
CUX2O14529 AC002486.1-201ENST00000435098 391 ntBASIC1.88□□□□□ -2.11
CUX2O14529 GPM6BP3-201ENST00000442797 145 ntBASIC1.88□□□□□ -2.11
CUX2O14529 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.88□□□□□ -2.11
CUX2O14529 AL360221.1-201ENST00000445989 335 ntBASIC1.88□□□□□ -2.11
CUX2O14529 AL356010.1-201ENST00000456364 102 ntBASIC1.88□□□□□ -2.11
CUX2O14529 PRELID3BP1-201ENST00000457142 540 ntBASIC1.88□□□□□ -2.11
CUX2O14529 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.88□□□□□ -2.11
CUX2O14529 AC022447.4-201ENST00000504053 364 ntBASIC1.88□□□□□ -2.11
CUX2O14529 AC009646.1-201ENST00000510455 318 ntBASIC1.88□□□□□ -2.11
CUX2O14529 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CUX2O14529 AL158211.1-201ENST00000566763 763 ntBASIC1.88□□□□□ -2.11
CUX2O14529 MIR3973-201ENST00000579824 107 ntBASIC1.88□□□□□ -2.11
CUX2O14529 AC091135.1-201ENST00000585943 307 ntBASIC1.88□□□□□ -2.11
CUX2O14529 AC008752.3-201ENST00000588113 712 ntBASIC1.88□□□□□ -2.11
CUX2O14529 AL022345.1-201ENST00000607292 135 ntBASIC1.88□□□□□ -2.11
CUX2O14529 SNORA16.2-201ENST00000390991 127 ntBASIC1.88□□□□□ -2.11
CUX2O14529 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.88□□□□□ -2.11
CUX2O14529 RPL31P63-201ENST00000422565 375 ntBASIC1.88□□□□□ -2.11
CUX2O14529 MTATP6P17-201ENST00000431030 672 ntBASIC1.88□□□□□ -2.11
CUX2O14529 RPS15AP10-201ENST00000432472 382 ntBASIC1.88□□□□□ -2.11
CUX2O14529 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.88□□□□□ -2.11
CUX2O14529 PTP4A1P4-201ENST00000512479 322 ntBASIC1.88□□□□□ -2.11
CUX2O14529 MTND4P7-201ENST00000523876 130 ntBASIC1.88□□□□□ -2.11
CUX2O14529 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.88□□□□□ -2.11
CUX2O14529 AL137161.1-201ENST00000532231 390 ntBASIC1.88□□□□□ -2.11
CUX2O14529 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.88□□□□□ -2.11
CUX2O14529 AC010620.1-201ENST00000601088 1102 ntBASIC1.88□□□□□ -2.11
CUX2O14529 U2.17-201ENST00000611454 95 ntBASIC1.88□□□□□ -2.11
CUX2O14529 MIR6857-201ENST00000613267 93 ntBASIC1.88□□□□□ -2.11
CUX2O14529 AC136475.10-201ENST00000620253 385 ntBASIC1.88□□□□□ -2.11
CUX2O14529 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.87□□□□□ -2.11
CUX2O14529 RNU6-1285P-201ENST00000363480 105 ntBASIC1.87□□□□□ -2.11
CUX2O14529 RNU4-56P-201ENST00000364700 142 ntBASIC1.87□□□□□ -2.11
CUX2O14529 RNU6-996P-201ENST00000365438 107 ntBASIC1.87□□□□□ -2.11
CUX2O14529 Y_RNA.553-201ENST00000384670 102 ntBASIC1.87□□□□□ -2.11
CUX2O14529 SNORA46.1-201ENST00000391069 153 ntBASIC1.87□□□□□ -2.11
CUX2O14529 AC010975.2-201ENST00000427781 588 ntBASIC1.87□□□□□ -2.11
CUX2O14529 MTCO1P19-201ENST00000443487 500 ntBASIC1.87□□□□□ -2.11
CUX2O14529 AL031274.1-201ENST00000450334 232 ntBASIC1.87□□□□□ -2.11
CUX2O14529 RPL23AP3-201ENST00000453844 468 ntBASIC1.87□□□□□ -2.11
CUX2O14529 RNU7-63P-201ENST00000459054 62 ntBASIC1.87□□□□□ -2.11
CUX2O14529 AK3P2-201ENST00000507976 429 ntBASIC1.87□□□□□ -2.11
CUX2O14529 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.87□□□□□ -2.11
CUX2O14529 AC012507.3-201ENST00000603556 477 ntBASIC1.87□□□□□ -2.11
CUX2O14529 AC091932.3-201ENST00000624223 323 ntBASIC1.87□□□□□ -2.11
CUX2O14529 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.86□□□□□ -2.11
CUX2O14529 Y_RNA.159-201ENST00000363674 87 ntBASIC1.86□□□□□ -2.11
CUX2O14529 RNU6-142P-201ENST00000384019 107 ntBASIC1.86□□□□□ -2.11
CUX2O14529 RNU6-1103P-201ENST00000384150 107 ntBASIC1.86□□□□□ -2.11
CUX2O14529 SNORA75-201ENST00000384158 137 ntBASIC1.86□□□□□ -2.11
CUX2O14529 RNU6-1042P-201ENST00000384204 107 ntBASIC1.86□□□□□ -2.11
CUX2O14529 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CUX2O14529 BTF3L4P2-201ENST00000392798 346 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms