Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 SNORA16.2-201ENST00000390991 127 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 RNA5SP496-201ENST00000391240 109 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 SNORA40C-201ENST00000391285 128 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 MTCO2P31-201ENST00000402702 684 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 AL359634.1-202ENST00000404721 284 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 AL592310.1-201ENST00000414330 671 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 AC244098.3-201ENST00000424803 96 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.03□□□□□ -2.41
CACNA1AO00555 LARP1BP3-201ENST00000437229 869 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 AL133217.1-201ENST00000450980 425 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 LINC01399-202ENST00000458450 244 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 RNU7-59P-201ENST00000459101 61 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 HMGN1P12-201ENST00000499125 195 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 MTCO1P31-201ENST00000506355 492 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 RN7SKP164-201ENST00000516138 266 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 SUMO2P16-201ENST00000519475 264 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 AC090502.2-201ENST00000549267 280 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 TRAV32-201ENST00000553993 340 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.03□□□□□ -2.41
CACNA1AO00555 MIR4709-201ENST00000577272 72 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 RNU6-87P-201ENST00000607561 108 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 AC017083.3-201ENST00000609955 700 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 AL163051.2-201ENST00000618976 735 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 MIR3529-201ENST00000637713 78 ntBASIC-0.03□□□□□ -2.41
CACNA1AO00555 RNU6-28P-201ENST00000362378 107 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 SNORD31B-201ENST00000364977 69 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 RNU6-898P-201ENST00000365627 104 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 MIR124-2-201ENST00000385081 109 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 Y_RNA.597-201ENST00000410463 100 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 MTCO1P21-201ENST00000416634 589 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 MTCO2P34-201ENST00000421994 607 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.04□□□□□ -2.42
CACNA1AO00555 BRK1P2-201ENST00000442875 223 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 U7.7-201ENST00000459276 60 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.04□□□□□ -2.42
CACNA1AO00555 AC093259.1-201ENST00000509755 300 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.04□□□□□ -2.42
CACNA1AO00555 RNU6-922P-201ENST00000516753 99 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 RNU6-703P-201ENST00000516946 107 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-0.04□□□□□ -2.42
CACNA1AO00555 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.04□□□□□ -2.42
CACNA1AO00555 AC093012.1-202ENST00000549403 582 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-0.04□□□□□ -2.42
CACNA1AO00555 MIR4431-201ENST00000579990 94 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 AF038458.1-201ENST00000588406 262 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 AC022022.2-201ENST00000602989 360 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 AL031281.1-201ENST00000604049 488 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.04□□□□□ -2.42
CACNA1AO00555 AC009268.2-201ENST00000621925 457 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 MTND5P33-201ENST00000571250 1450 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 AP000568.1-201ENST00000282964 442 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 MIR103A2-201ENST00000362154 78 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 RNU6-743P-201ENST00000364151 106 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 RNU6-512P-201ENST00000364438 103 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 RNU6-359P-201ENST00000365466 108 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 RNY1P8-201ENST00000383970 114 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 AL034345.1-201ENST00000407768 123 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.04□□□□□ -2.42
CACNA1AO00555 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.04□□□□□ -2.42
CACNA1AO00555 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC-0.04□□□□□ -2.42
CACNA1AO00555 TIMM9P1-201ENST00000436122 256 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 RPL7P55-201ENST00000450522 746 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.04□□□□□ -2.42
CACNA1AO00555 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC-0.04□□□□□ -2.42
CACNA1AO00555 MIR4499-201ENST00000584834 69 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 AC133794.1-201ENST00000602731 914 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 AC021506.2-201ENST00000612354 169 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 AC009032.1-201ENST00000617574 431 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 AL603839.4-201ENST00000624658 1005 ntBASIC-0.04□□□□□ -2.42
CACNA1AO00555 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-0.04□□□□□ -2.42
CACNA1AO00555 AC092268.1-201ENST00000342691 405 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 SNORA27.3-201ENST00000364937 134 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 RNU6-163P-201ENST00000384396 106 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 MIR16-1-201ENST00000385271 89 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 SNORD105-201ENST00000386910 85 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 RNU6-952P-201ENST00000391164 108 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
CACNA1AO00555 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
CACNA1AO00555 AC123900.1-201ENST00000420390 96 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.05□□□□□ -2.42
CACNA1AO00555 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC-0.05□□□□□ -2.42
CACNA1AO00555 AC020550.1-201ENST00000447385 163 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC-0.05□□□□□ -2.42
CACNA1AO00555 BTF3P15-201ENST00000455606 336 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 MTCO2P18-201ENST00000457151 658 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 RNU6-333P-201ENST00000459117 107 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.05□□□□□ -2.42
CACNA1AO00555 AC010587.2-201ENST00000511727 448 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 RNU6-863P-201ENST00000515989 104 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 AC021231.3-201ENST00000558497 370 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.05□□□□□ -2.42
CACNA1AO00555 AL353149.1-201ENST00000610667 244 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
CACNA1AO00555 RNU6-853P-201ENST00000364306 107 ntBASIC-0.05□□□□□ -2.42
CACNA1AO00555 SNORA4.2-201ENST00000365313 147 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms