Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 SNORA18.6-201ENST00000516792 115 ntBASIC0.93□□□□□ -2.26
UPK2O00526 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.93□□□□□ -2.26
UPK2O00526 MIR3908-201ENST00000579798 126 ntBASIC0.93□□□□□ -2.26
UPK2O00526 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.93□□□□□ -2.26
UPK2O00526 RNU6-85P-201ENST00000605989 107 ntBASIC0.93□□□□□ -2.26
UPK2O00526 AL050343.2-201ENST00000607338 280 ntBASIC0.93□□□□□ -2.26
UPK2O00526 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.93□□□□□ -2.26
UPK2O00526 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
UPK2O00526 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
UPK2O00526 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.93□□□□□ -2.26
UPK2O00526 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
UPK2O00526 SNORD33-201ENST00000362761 85 ntBASIC0.92□□□□□ -2.26
UPK2O00526 RNU6-1065P-201ENST00000384513 106 ntBASIC0.92□□□□□ -2.26
UPK2O00526 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.92□□□□□ -2.26
UPK2O00526 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.92□□□□□ -2.26
UPK2O00526 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.92□□□□□ -2.26
UPK2O00526 AC016717.1-201ENST00000448918 286 ntBASIC0.92□□□□□ -2.26
UPK2O00526 RNU7-95P-201ENST00000459222 64 ntBASIC0.92□□□□□ -2.26
UPK2O00526 RNU6-567P-201ENST00000516746 107 ntBASIC0.92□□□□□ -2.26
UPK2O00526 AC060788.1-201ENST00000521318 469 ntBASIC0.92□□□□□ -2.26
UPK2O00526 AL512310.8-201ENST00000550183 120 ntBASIC0.92□□□□□ -2.26
UPK2O00526 MIR4295-201ENST00000585286 85 ntBASIC0.92□□□□□ -2.26
UPK2O00526 MZT1P2-201ENST00000604387 248 ntBASIC0.92□□□□□ -2.26
UPK2O00526 AC005520.5-201ENST00000613926 164 ntBASIC0.92□□□□□ -2.26
UPK2O00526 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.92□□□□□ -2.26
UPK2O00526 AC079248.2-201ENST00000623779 326 ntBASIC0.92□□□□□ -2.26
UPK2O00526 AC007494.3-201ENST00000624660 743 ntBASIC0.92□□□□□ -2.26
UPK2O00526 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.92□□□□□ -2.26
UPK2O00526 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
UPK2O00526 MIR513A1-201ENST00000385138 129 ntBASIC0.91□□□□□ -2.26
UPK2O00526 MIR549A-201ENST00000385268 96 ntBASIC0.91□□□□□ -2.26
UPK2O00526 MIR618-201ENST00000385287 98 ntBASIC0.91□□□□□ -2.26
UPK2O00526 SNORD73A-201ENST00000386062 65 ntBASIC0.91□□□□□ -2.26
UPK2O00526 SNORA11.2-201ENST00000408318 127 ntBASIC0.91□□□□□ -2.26
UPK2O00526 AC004965.1-201ENST00000413033 213 ntBASIC0.91□□□□□ -2.26
UPK2O00526 COX6CP10-201ENST00000416832 224 ntBASIC0.91□□□□□ -2.26
UPK2O00526 AC090960.1-201ENST00000421072 306 ntBASIC0.91□□□□□ -2.26
UPK2O00526 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.91□□□□□ -2.26
UPK2O00526 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.91□□□□□ -2.26
UPK2O00526 RNU7-34P-201ENST00000459394 64 ntBASIC0.91□□□□□ -2.26
UPK2O00526 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.91□□□□□ -2.26
UPK2O00526 AC010486.2-201ENST00000505572 483 ntBASIC0.91□□□□□ -2.26
UPK2O00526 RN7SKP265-201ENST00000516448 223 ntBASIC0.91□□□□□ -2.26
UPK2O00526 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.91□□□□□ -2.26
UPK2O00526 CENPUP1-201ENST00000526649 1202 ntBASIC0.91□□□□□ -2.26
UPK2O00526 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.91□□□□□ -2.26
UPK2O00526 NIFKP6-201ENST00000598115 845 ntBASIC0.91□□□□□ -2.26
UPK2O00526 AC064807.4-201ENST00000607201 407 ntBASIC0.91□□□□□ -2.26
UPK2O00526 AL355802.3-201ENST00000607571 545 ntBASIC0.91□□□□□ -2.26
UPK2O00526 AL353770.2-201ENST00000620024 78 ntBASIC0.91□□□□□ -2.26
UPK2O00526 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.91□□□□□ -2.26
UPK2O00526 MIR338-201ENST00000636369 67 ntBASIC0.91□□□□□ -2.26
UPK2O00526 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
UPK2O00526 AC009541.1-201ENST00000438279 2662 ntBASIC0.9□□□□□ -2.27
UPK2O00526 RNU6-181P-201ENST00000363225 107 ntBASIC0.9□□□□□ -2.27
UPK2O00526 MIR1283-1-201ENST00000408494 87 ntBASIC0.9□□□□□ -2.27
UPK2O00526 AP000275.1-201ENST00000411943 390 ntBASIC0.9□□□□□ -2.27
UPK2O00526 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.9□□□□□ -2.27
UPK2O00526 SNX2P2-201ENST00000424553 323 ntBASIC0.9□□□□□ -2.27
UPK2O00526 CETN4P-201ENST00000432407 469 ntBASIC0.9□□□□□ -2.27
UPK2O00526 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.9□□□□□ -2.27
UPK2O00526 RPS29P28-201ENST00000446439 141 ntBASIC0.9□□□□□ -2.27
UPK2O00526 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.9□□□□□ -2.27
UPK2O00526 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.9□□□□□ -2.27
UPK2O00526 AL163195.1-201ENST00000496941 348 ntBASIC0.9□□□□□ -2.27
UPK2O00526 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.9□□□□□ -2.27
UPK2O00526 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.9□□□□□ -2.27
UPK2O00526 AC067942.3-201ENST00000512025 362 ntBASIC0.9□□□□□ -2.27
UPK2O00526 RN7SKP88-201ENST00000516847 250 ntBASIC0.9□□□□□ -2.27
UPK2O00526 RNU6-445P-201ENST00000516949 107 ntBASIC0.9□□□□□ -2.27
UPK2O00526 RNU6-323P-201ENST00000521915 107 ntBASIC0.9□□□□□ -2.27
UPK2O00526 AL442163.3-201ENST00000554110 156 ntBASIC0.9□□□□□ -2.27
UPK2O00526 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.9□□□□□ -2.27
UPK2O00526 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.9□□□□□ -2.27
UPK2O00526 MTCO3P23-201ENST00000561363 289 ntBASIC0.9□□□□□ -2.27
UPK2O00526 MIR4709-201ENST00000577272 72 ntBASIC0.9□□□□□ -2.27
UPK2O00526 AC245014.2-201ENST00000603689 287 ntBASIC0.9□□□□□ -2.27
UPK2O00526 AC246785.4-201ENST00000605374 287 ntBASIC0.9□□□□□ -2.27
UPK2O00526 7SK.8-201ENST00000612110 250 ntBASIC0.9□□□□□ -2.27
UPK2O00526 AC122133.1-201ENST00000613964 233 ntBASIC0.9□□□□□ -2.27
UPK2O00526 7SK.11-201ENST00000615477 250 ntBASIC0.9□□□□□ -2.27
UPK2O00526 MIR8065-201ENST00000620577 100 ntBASIC0.9□□□□□ -2.27
UPK2O00526 7SK.13-201ENST00000622040 250 ntBASIC0.9□□□□□ -2.27
UPK2O00526 BX322639.1-202ENST00000423987 2213 ntBASIC0.9□□□□□ -2.27
UPK2O00526 RNA5SP259-201ENST00000365541 109 ntBASIC0.89□□□□□ -2.27
UPK2O00526 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.89□□□□□ -2.27
UPK2O00526 AC013410.2-201ENST00000422627 201 ntBASIC0.89□□□□□ -2.27
UPK2O00526 CST2P1-201ENST00000425770 87 ntBASIC0.89□□□□□ -2.27
UPK2O00526 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.89□□□□□ -2.27
UPK2O00526 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.89□□□□□ -2.27
UPK2O00526 snoU13.23-201ENST00000458863 104 ntBASIC0.89□□□□□ -2.27
UPK2O00526 RPS26P45-201ENST00000471748 340 ntBASIC0.89□□□□□ -2.27
UPK2O00526 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.89□□□□□ -2.27
UPK2O00526 AC093852.1-201ENST00000503587 266 ntBASIC0.89□□□□□ -2.27
UPK2O00526 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.89□□□□□ -2.27
UPK2O00526 AC105417.1-201ENST00000514691 285 ntBASIC0.89□□□□□ -2.27
UPK2O00526 AC069113.1-201ENST00000517763 267 ntBASIC0.89□□□□□ -2.27
UPK2O00526 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
UPK2O00526 AP002963.1-201ENST00000530590 184 ntBASIC0.89□□□□□ -2.27
UPK2O00526 AC015712.3-201ENST00000559380 164 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms