Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.29□□□□□ -2.46
HMGN4O00479 AC092634.7-201ENST00000621022 103 ntBASIC-0.29□□□□□ -2.46
HMGN4O00479 BX322639.1-202ENST00000423987 2213 ntBASIC-0.3□□□□□ -2.46
HMGN4O00479 MIR103A2-201ENST00000362154 78 ntBASIC-0.3□□□□□ -2.46
HMGN4O00479 Y_RNA.132-201ENST00000363421 102 ntBASIC-0.3□□□□□ -2.46
HMGN4O00479 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.3□□□□□ -2.46
HMGN4O00479 RPS20P2-201ENST00000402520 389 ntBASIC-0.3□□□□□ -2.46
HMGN4O00479 MTND1P20-201ENST00000430341 950 ntBASIC-0.3□□□□□ -2.46
HMGN4O00479 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.3□□□□□ -2.46
HMGN4O00479 RPL18AP17-201ENST00000455326 198 ntBASIC-0.3□□□□□ -2.46
HMGN4O00479 MTCO3P10-201ENST00000455912 772 ntBASIC-0.3□□□□□ -2.46
HMGN4O00479 AC026414.1-201ENST00000504046 698 ntBASIC-0.3□□□□□ -2.46
HMGN4O00479 LRRC34P2-201ENST00000514850 553 ntBASIC-0.3□□□□□ -2.46
HMGN4O00479 RNU6-863P-201ENST00000515989 104 ntBASIC-0.3□□□□□ -2.46
HMGN4O00479 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.3□□□□□ -2.46
HMGN4O00479 AC024995.1-201ENST00000523014 93 ntBASIC-0.3□□□□□ -2.46
HMGN4O00479 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.3□□□□□ -2.46
HMGN4O00479 MIR4789-201ENST00000577469 82 ntBASIC-0.3□□□□□ -2.46
HMGN4O00479 AC110760.3-201ENST00000598794 467 ntBASIC-0.3□□□□□ -2.46
HMGN4O00479 AL606834.3-201ENST00000602615 496 ntBASIC-0.3□□□□□ -2.46
HMGN4O00479 AC104408.1-201ENST00000605241 170 ntBASIC-0.3□□□□□ -2.46
HMGN4O00479 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.31□□□□□ -2.46
HMGN4O00479 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.31□□□□□ -2.46
HMGN4O00479 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.31□□□□□ -2.46
HMGN4O00479 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.31□□□□□ -2.46
HMGN4O00479 RPL7P55-201ENST00000450522 746 ntBASIC-0.31□□□□□ -2.46
HMGN4O00479 AL139824.2-201ENST00000458731 1095 ntBASIC-0.31□□□□□ -2.46
HMGN4O00479 snoU13.25-201ENST00000458945 104 ntBASIC-0.31□□□□□ -2.46
HMGN4O00479 AC113347.3-201ENST00000509113 148 ntBASIC-0.31□□□□□ -2.46
HMGN4O00479 AC022868.1-201ENST00000517767 391 ntBASIC-0.31□□□□□ -2.46
HMGN4O00479 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.31□□□□□ -2.46
HMGN4O00479 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.31□□□□□ -2.46
HMGN4O00479 AC141557.1-201ENST00000540982 400 ntBASIC-0.31□□□□□ -2.46
HMGN4O00479 UBE2Q2P8-201ENST00000560644 102 ntBASIC-0.31□□□□□ -2.46
HMGN4O00479 AC010620.1-201ENST00000601088 1102 ntBASIC-0.31□□□□□ -2.46
HMGN4O00479 AC012507.3-201ENST00000603556 477 ntBASIC-0.31□□□□□ -2.46
HMGN4O00479 AL022154.1-201ENST00000604698 785 ntBASIC-0.31□□□□□ -2.46
HMGN4O00479 AL031667.3-201ENST00000620124 655 ntBASIC-0.31□□□□□ -2.46
HMGN4O00479 SNORD98-201ENST00000636377 67 ntBASIC-0.31□□□□□ -2.46
HMGN4O00479 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.32□□□□□ -2.46
HMGN4O00479 SNORD114-5-201ENST00000362928 70 ntBASIC-0.32□□□□□ -2.46
HMGN4O00479 RNU4-41P-201ENST00000364426 143 ntBASIC-0.32□□□□□ -2.46
HMGN4O00479 RNU6-514P-201ENST00000384208 107 ntBASIC-0.32□□□□□ -2.46
HMGN4O00479 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.32□□□□□ -2.46
HMGN4O00479 MIR544A-201ENST00000384855 91 ntBASIC-0.32□□□□□ -2.46
HMGN4O00479 RNU2-42P-201ENST00000410697 113 ntBASIC-0.32□□□□□ -2.46
HMGN4O00479 AL158050.1-201ENST00000416077 457 ntBASIC-0.32□□□□□ -2.46
HMGN4O00479 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.32□□□□□ -2.46
HMGN4O00479 VPS26BP1-201ENST00000417155 755 ntBASIC-0.32□□□□□ -2.46
HMGN4O00479 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.32□□□□□ -2.46
HMGN4O00479 AL606517.2-201ENST00000442855 241 ntBASIC-0.32□□□□□ -2.46
HMGN4O00479 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-0.32□□□□□ -2.46
HMGN4O00479 RPL23AP54-201ENST00000495129 419 ntBASIC-0.32□□□□□ -2.46
HMGN4O00479 AC116347.2-201ENST00000514912 523 ntBASIC-0.32□□□□□ -2.46
HMGN4O00479 RNU6-917P-201ENST00000516294 104 ntBASIC-0.32□□□□□ -2.46
HMGN4O00479 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-0.32□□□□□ -2.46
HMGN4O00479 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
HMGN4O00479 AC122134.1-202ENST00000569111 1201 ntBASIC-0.32□□□□□ -2.46
HMGN4O00479 AC005730.3-201ENST00000583067 366 ntBASIC-0.32□□□□□ -2.46
HMGN4O00479 MIR4305-201ENST00000583252 102 ntBASIC-0.32□□□□□ -2.46
HMGN4O00479 AC064872.1-201ENST00000604823 1072 ntBASIC-0.32□□□□□ -2.46
HMGN4O00479 AC004832.4-201ENST00000608952 331 ntBASIC-0.32□□□□□ -2.46
HMGN4O00479 AL096861.1-201ENST00000610899 123 ntBASIC-0.32□□□□□ -2.46
HMGN4O00479 AC104073.3-201ENST00000610942 955 ntBASIC-0.32□□□□□ -2.46
HMGN4O00479 SEPT14P17-201ENST00000617978 177 ntBASIC-0.32□□□□□ -2.46
HMGN4O00479 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.33□□□□□ -2.46
HMGN4O00479 SNORA2.2-201ENST00000365473 135 ntBASIC-0.33□□□□□ -2.46
HMGN4O00479 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.33□□□□□ -2.46
HMGN4O00479 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.33□□□□□ -2.46
HMGN4O00479 AC079776.3-201ENST00000450665 370 ntBASIC-0.33□□□□□ -2.46
HMGN4O00479 MTCO2P18-201ENST00000457151 658 ntBASIC-0.33□□□□□ -2.46
HMGN4O00479 AL163973.1-201ENST00000484753 577 ntBASIC-0.33□□□□□ -2.46
HMGN4O00479 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.33□□□□□ -2.46
HMGN4O00479 SNORA25.12-201ENST00000516202 82 ntBASIC-0.33□□□□□ -2.46
HMGN4O00479 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.33□□□□□ -2.46
HMGN4O00479 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.33□□□□□ -2.46
HMGN4O00479 RNU2-34P-201ENST00000516534 121 ntBASIC-0.33□□□□□ -2.46
HMGN4O00479 RNU6-677P-201ENST00000516914 101 ntBASIC-0.33□□□□□ -2.46
HMGN4O00479 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC-0.33□□□□□ -2.46
HMGN4O00479 MIR15A-201ENST00000607334 83 ntBASIC-0.33□□□□□ -2.46
HMGN4O00479 MIR2909-201ENST00000617113 69 ntBASIC-0.33□□□□□ -2.46
HMGN4O00479 AC015726.2-201ENST00000620112 122 ntBASIC-0.33□□□□□ -2.46
HMGN4O00479 MIR8054-201ENST00000620877 86 ntBASIC-0.33□□□□□ -2.46
HMGN4O00479 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.33□□□□□ -2.46
HMGN4O00479 MTND5P33-201ENST00000571250 1450 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
HMGN4O00479 MIR18A-201ENST00000362310 71 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 RNU1-76P-201ENST00000362903 159 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 SNORD114-26-201ENST00000363543 72 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 RNY4P16-201ENST00000364768 94 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 RNU6-418P-201ENST00000384035 107 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 U6.112-201ENST00000384129 70 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 SNORA12.1-201ENST00000390873 148 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 MIR1827-201ENST00000408549 66 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 RNA5SP201-201ENST00000410316 124 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 SNORA40.8-201ENST00000411034 126 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 SNORD71-201ENST00000411292 86 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 AL121578.1-201ENST00000428051 892 ntBASIC-0.34□□□□□ -2.46
HMGN4O00479 TIMM9P3-201ENST00000428659 274 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms