Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 MIR1262-201ENST00000408276 93 ntBASIC2.05□□□□□ -2.08
RTCAO00442 MIR548K-201ENST00000408406 116 ntBASIC2.05□□□□□ -2.08
RTCAO00442 RNA5SP201-201ENST00000410316 124 ntBASIC2.05□□□□□ -2.08
RTCAO00442 Z98742.3-201ENST00000418637 326 ntBASIC2.05□□□□□ -2.08
RTCAO00442 AL139396.1-201ENST00000421137 167 ntBASIC2.05□□□□□ -2.08
RTCAO00442 AL590632.1-201ENST00000424289 371 ntBASIC2.05□□□□□ -2.08
RTCAO00442 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.05□□□□□ -2.08
RTCAO00442 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.05□□□□□ -2.08
RTCAO00442 AC104564.1-201ENST00000493028 407 ntBASIC2.05□□□□□ -2.08
RTCAO00442 AC091874.1-201ENST00000511402 339 ntBASIC2.05□□□□□ -2.08
RTCAO00442 RPL39P5-202ENST00000512505 151 ntBASIC2.05□□□□□ -2.08
RTCAO00442 MIR6873-201ENST00000622788 63 ntBASIC2.05□□□□□ -2.08
RTCAO00442 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
RTCAO00442 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
RTCAO00442 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
RTCAO00442 AC009541.1-201ENST00000438279 2662 ntBASIC2.04□□□□□ -2.08
RTCAO00442 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RTCAO00442 CBX3P1-201ENST00000325243 554 ntBASIC2.04□□□□□ -2.08
RTCAO00442 RNU1-58P-201ENST00000362413 163 ntBASIC2.04□□□□□ -2.08
RTCAO00442 RNU4-15P-201ENST00000362613 141 ntBASIC2.04□□□□□ -2.08
RTCAO00442 Y_RNA.88-201ENST00000363029 99 ntBASIC2.04□□□□□ -2.08
RTCAO00442 RNU6-944P-201ENST00000364023 107 ntBASIC2.04□□□□□ -2.08
RTCAO00442 RNU6-593P-201ENST00000364716 112 ntBASIC2.04□□□□□ -2.08
RTCAO00442 RNU6-1286P-201ENST00000383871 107 ntBASIC2.04□□□□□ -2.08
RTCAO00442 SNORA32.2-201ENST00000384049 122 ntBASIC2.04□□□□□ -2.08
RTCAO00442 RNU6-933P-201ENST00000384424 107 ntBASIC2.04□□□□□ -2.08
RTCAO00442 RNU11-3P-201ENST00000391111 133 ntBASIC2.04□□□□□ -2.08
RTCAO00442 SNORA3.2-201ENST00000408221 125 ntBASIC2.04□□□□□ -2.08
RTCAO00442 RNA5SP489-201ENST00000410986 109 ntBASIC2.04□□□□□ -2.08
RTCAO00442 RNA5SP508-201ENST00000411327 119 ntBASIC2.04□□□□□ -2.08
RTCAO00442 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RTCAO00442 RPS26P42-201ENST00000413485 326 ntBASIC2.04□□□□□ -2.08
RTCAO00442 HMGN2P3-201ENST00000433603 273 ntBASIC2.04□□□□□ -2.08
RTCAO00442 HMGN2P5-201ENST00000436882 273 ntBASIC2.04□□□□□ -2.08
RTCAO00442 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.04□□□□□ -2.08
RTCAO00442 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.04□□□□□ -2.08
RTCAO00442 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.04□□□□□ -2.08
RTCAO00442 PCMTD1P1-201ENST00000455560 355 ntBASIC2.04□□□□□ -2.08
RTCAO00442 MTND5P5-201ENST00000503764 376 ntBASIC2.04□□□□□ -2.08
RTCAO00442 RNA5SP200-201ENST00000516360 103 ntBASIC2.04□□□□□ -2.08
RTCAO00442 SCARNA16.3-201ENST00000516595 184 ntBASIC2.04□□□□□ -2.08
RTCAO00442 Y_RNA.691-201ENST00000516611 103 ntBASIC2.04□□□□□ -2.08
RTCAO00442 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.04□□□□□ -2.08
RTCAO00442 AP002770.2-201ENST00000543613 532 ntBASIC2.04□□□□□ -2.08
RTCAO00442 AC022254.1-201ENST00000567857 235 ntBASIC2.04□□□□□ -2.08
RTCAO00442 AC124303.1-201ENST00000605703 360 ntBASIC2.04□□□□□ -2.08
RTCAO00442 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.04□□□□□ -2.08
RTCAO00442 MIR6132-201ENST00000622083 109 ntBASIC2.04□□□□□ -2.08
RTCAO00442 RNU5B-2P-201ENST00000363036 113 ntBASIC2.03□□□□□ -2.08
RTCAO00442 Y_RNA.151-201ENST00000363566 112 ntBASIC2.03□□□□□ -2.08
RTCAO00442 SNORD32B-201ENST00000364460 84 ntBASIC2.03□□□□□ -2.08
RTCAO00442 RNU4-56P-201ENST00000364700 142 ntBASIC2.03□□□□□ -2.08
RTCAO00442 Y_RNA.339-201ENST00000365325 102 ntBASIC2.03□□□□□ -2.08
RTCAO00442 Y_RNA.390-201ENST00000383932 102 ntBASIC2.03□□□□□ -2.08
RTCAO00442 RNU6-876P-201ENST00000391295 104 ntBASIC2.03□□□□□ -2.08
RTCAO00442 AL023284.1-201ENST00000403956 276 ntBASIC2.03□□□□□ -2.08
RTCAO00442 SNORA11.4-201ENST00000408823 129 ntBASIC2.03□□□□□ -2.08
RTCAO00442 RNU2-40P-201ENST00000410833 196 ntBASIC2.03□□□□□ -2.08
RTCAO00442 HMGB3P2-201ENST00000411913 584 ntBASIC2.03□□□□□ -2.08
RTCAO00442 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
RTCAO00442 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.03□□□□□ -2.08
RTCAO00442 NCOR1P3-201ENST00000420479 303 ntBASIC2.03□□□□□ -2.08
RTCAO00442 AL590135.1-201ENST00000422215 156 ntBASIC2.03□□□□□ -2.08
RTCAO00442 AC019205.3-201ENST00000424573 156 ntBASIC2.03□□□□□ -2.08
RTCAO00442 AC016700.2-201ENST00000446011 156 ntBASIC2.03□□□□□ -2.08
RTCAO00442 AC132942.1-201ENST00000486753 483 ntBASIC2.03□□□□□ -2.08
RTCAO00442 AC015911.1-201ENST00000495111 156 ntBASIC2.03□□□□□ -2.08
RTCAO00442 AC008549.1-201ENST00000512900 643 ntBASIC2.03□□□□□ -2.08
RTCAO00442 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.03□□□□□ -2.08
RTCAO00442 SNORA31.16-201ENST00000516773 139 ntBASIC2.03□□□□□ -2.08
RTCAO00442 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.03□□□□□ -2.08
RTCAO00442 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
RTCAO00442 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.03□□□□□ -2.08
RTCAO00442 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.03□□□□□ -2.08
RTCAO00442 SNRPGP18-201ENST00000553000 214 ntBASIC2.03□□□□□ -2.08
RTCAO00442 AC026464.5-201ENST00000562497 722 ntBASIC2.03□□□□□ -2.08
RTCAO00442 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.03□□□□□ -2.08
RTCAO00442 CYP4A27P-201ENST00000567218 190 ntBASIC2.03□□□□□ -2.08
RTCAO00442 MIR3923-201ENST00000579521 83 ntBASIC2.03□□□□□ -2.08
RTCAO00442 MIR5002-201ENST00000584713 97 ntBASIC2.03□□□□□ -2.08
RTCAO00442 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.03□□□□□ -2.08
RTCAO00442 AC098657.3-201ENST00000620434 263 ntBASIC2.03□□□□□ -2.08
RTCAO00442 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.03□□□□□ -2.08
RTCAO00442 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
RTCAO00442 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RTCAO00442 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
RTCAO00442 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
RTCAO00442 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
RTCAO00442 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RTCAO00442 SNORD115-3-201ENST00000363100 82 ntBASIC2.02□□□□□ -2.09
RTCAO00442 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.02□□□□□ -2.09
RTCAO00442 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RTCAO00442 SNORA67.3-201ENST00000384366 140 ntBASIC2.02□□□□□ -2.09
RTCAO00442 MIR517A-201ENST00000385001 87 ntBASIC2.02□□□□□ -2.09
RTCAO00442 AC009310.1-201ENST00000414414 451 ntBASIC2.02□□□□□ -2.09
RTCAO00442 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.02□□□□□ -2.09
RTCAO00442 MTND3P9-201ENST00000429526 346 ntBASIC2.02□□□□□ -2.09
RTCAO00442 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.02□□□□□ -2.09
RTCAO00442 MTND3P10-201ENST00000450967 341 ntBASIC2.02□□□□□ -2.09
RTCAO00442 AC112492.4-201ENST00000456549 352 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms