Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 BX322639.1-202ENST00000423987 2213 ntBASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 Y_RNA.27-201ENST00000362540 103 ntBASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 RNA5SP361-201ENST00000362686 118 ntBASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 Y_RNA.145-201ENST00000363527 102 ntBASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 RNU5F-3P-201ENST00000363767 117 ntBASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 SNORA18.2-201ENST00000383865 132 ntBASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 RNU6-985P-201ENST00000410182 104 ntBASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 AC104332.2-201ENST00000429959 156 ntBASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 AC092427.1-202ENST00000430569 476 ntBASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 EEF1B2P7-201ENST00000451177 676 ntBASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 RNU6-1045P-201ENST00000516321 107 ntBASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 Y_RNA.720-201ENST00000517166 92 ntBASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 AC022616.4-201ENST00000522985 181 ntBASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 AP002770.2-201ENST00000543613 532 ntBASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 AL390123.1-201ENST00000603216 237 ntBASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 AC116312.1-201ENST00000606841 314 ntBASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 AC000403.1-201ENST00000613696 3585 ntBASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
MBD3L4A6NDZ8 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
MBD3L4A6NDZ8 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
MBD3L4A6NDZ8 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
MBD3L4A6NDZ8 FAM35CP-201ENST00000554755 2470 ntBASIC2.74□□□□□ -1.97
MBD3L4A6NDZ8 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.74□□□□□ -1.97
MBD3L4A6NDZ8 RNU6-245P-201ENST00000384020 107 ntBASIC2.74□□□□□ -1.97
MBD3L4A6NDZ8 RNY3P4-201ENST00000384428 101 ntBASIC2.74□□□□□ -1.97
MBD3L4A6NDZ8 RNU6-823P-201ENST00000391042 103 ntBASIC2.74□□□□□ -1.97
MBD3L4A6NDZ8 snosnR66.1-201ENST00000391095 99 ntBASIC2.74□□□□□ -1.97
MBD3L4A6NDZ8 MIR1294-201ENST00000408503 142 ntBASIC2.74□□□□□ -1.97
MBD3L4A6NDZ8 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.74□□□□□ -1.97
MBD3L4A6NDZ8 AC093852.1-201ENST00000503587 266 ntBASIC2.74□□□□□ -1.97
MBD3L4A6NDZ8 MIR449C-201ENST00000516047 92 ntBASIC2.74□□□□□ -1.97
MBD3L4A6NDZ8 RNU6-56P-201ENST00000516986 93 ntBASIC2.74□□□□□ -1.97
MBD3L4A6NDZ8 MIR5006-201ENST00000583027 110 ntBASIC2.74□□□□□ -1.97
MBD3L4A6NDZ8 AC006023.1-201ENST00000603944 259 ntBASIC2.74□□□□□ -1.97
MBD3L4A6NDZ8 AC010999.1-201ENST00000611856 324 ntBASIC2.74□□□□□ -1.97
MBD3L4A6NDZ8 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.74□□□□□ -1.97
MBD3L4A6NDZ8 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 MIR22-201ENST00000362190 85 ntBASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 SNORD56.5-201ENST00000364281 72 ntBASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 RNU4-50P-201ENST00000364361 141 ntBASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 SNORD32B-201ENST00000364460 84 ntBASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 RNA5SP125-201ENST00000364843 120 ntBASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 AP002088.1-201ENST00000382740 395 ntBASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 RNU6-281P-201ENST00000384212 103 ntBASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 Y_RNA.459-201ENST00000384251 102 ntBASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 AL031121.1-201ENST00000406553 254 ntBASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 AC004386.2-201ENST00000441858 148 ntBASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 HMGN1P18-201ENST00000457642 277 ntBASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 AC010401.1-201ENST00000463867 348 ntBASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 RN7SL429P-201ENST00000479090 223 ntBASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 RN7SL489P-201ENST00000486185 223 ntBASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 RN7SL327P-201ENST00000488659 223 ntBASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 AC113195.1-201ENST00000579952 141 ntBASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 RPL12P50-201ENST00000603116 116 ntBASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 AL355297.2-201ENST00000604792 129 ntBASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 TCL6_2.1-201ENST00000615162 119 ntBASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 RN7SL853P-201ENST00000617250 223 ntBASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 U6.92-201ENST00000636464 89 ntBASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
MBD3L4A6NDZ8 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 RNU1-75P-201ENST00000347264 129 ntBASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 RNU1-76P-201ENST00000362903 159 ntBASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 RNU6-926P-201ENST00000384075 107 ntBASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 Y_RNA.471-201ENST00000384312 102 ntBASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 SNORD67-201ENST00000390833 111 ntBASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 RNA5SP213-201ENST00000391031 106 ntBASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 SNORD78.2-201ENST00000391076 69 ntBASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 DPH3P2-201ENST00000422618 250 ntBASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 CBX3P6-201ENST00000430257 527 ntBASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 RNU5F-4P-201ENST00000516581 114 ntBASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 RNU6-965P-201ENST00000516721 96 ntBASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 RN7SKP40-201ENST00000517211 242 ntBASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 SCARNA20.6-201ENST00000517251 106 ntBASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 DEFB131C-201ENST00000528817 165 ntBASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 HSPE1P20-201ENST00000538133 289 ntBASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms