Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 MIR200A-201ENST00000384875 90 ntBASIC0.39□□□□□ -2.35
TCRBV4S1A1TA0A5B7 SNORA26.3-201ENST00000391119 136 ntBASIC0.39□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNU6-293P-201ENST00000411259 106 ntBASIC0.39□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNU6-1054P-201ENST00000411293 104 ntBASIC0.39□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNA5SP111-201ENST00000411386 101 ntBASIC0.39□□□□□ -2.35
TCRBV4S1A1TA0A5B7 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.39□□□□□ -2.35
TCRBV4S1A1TA0A5B7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.39□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.39□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.39□□□□□ -2.35
TCRBV4S1A1TA0A5B7 C1DP4-201ENST00000455429 424 ntBASIC0.39□□□□□ -2.35
TCRBV4S1A1TA0A5B7 TRBVA-201ENST00000498804 316 ntBASIC0.39□□□□□ -2.35
TCRBV4S1A1TA0A5B7 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.39□□□□□ -2.35
TCRBV4S1A1TA0A5B7 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AP001893.2-201ENST00000526949 202 ntBASIC0.39□□□□□ -2.35
TCRBV4S1A1TA0A5B7 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.39□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.39□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.39□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC008521.1-201ENST00000587471 187 ntBASIC0.39□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AL512605.2-201ENST00000592972 256 ntBASIC0.39□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC078795.3-201ENST00000602913 472 ntBASIC0.39□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC097478.2-201ENST00000610572 514 ntBASIC0.39□□□□□ -2.35
TCRBV4S1A1TA0A5B7 MIR6779-201ENST00000617283 64 ntBASIC0.39□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC009509.4-201ENST00000619202 509 ntBASIC0.39□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNA5SP499-201ENST00000363982 119 ntBASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 SNORD32A-201ENST00000364805 84 ntBASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNU6-969P-201ENST00000383900 105 ntBASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNU6-418P-201ENST00000384035 107 ntBASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNU6-1026P-201ENST00000384465 108 ntBASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNU6-1257P-201ENST00000384625 110 ntBASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AF228730.1-201ENST00000397972 663 ntBASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNU2-72P-201ENST00000411175 163 ntBASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNU6-607P-201ENST00000411283 108 ntBASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 MTATP6P20-201ENST00000414147 562 ntBASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 CETN4P-201ENST00000432407 469 ntBASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC245047.7-201ENST00000440265 293 ntBASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 COX6CP6-201ENST00000490840 228 ntBASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 HMGN1P12-201ENST00000499125 195 ntBASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC091435.1-201ENST00000505442 584 ntBASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC025423.5-201ENST00000550230 219 ntBASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 MIR3923-201ENST00000579521 83 ntBASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 MIR5692A1-201ENST00000580523 69 ntBASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC005730.3-201ENST00000583067 366 ntBASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AL929325.1-201ENST00000603096 117 ntBASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC112191.3-201ENST00000604371 277 ntBASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AL021368.1-201ENST00000607490 540 ntBASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC010487.4-201ENST00000637027 61 ntBASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AL589743.1-201ENST00000551932 2712 ntBASIC0.38□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.37□□□□□ -2.35
TCRBV4S1A1TA0A5B7 BX322639.1-202ENST00000423987 2213 ntBASIC0.37□□□□□ -2.35
TCRBV4S1A1TA0A5B7 Y_RNA.97-201ENST00000363094 102 ntBASIC0.37□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNU4-56P-201ENST00000364700 142 ntBASIC0.37□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNU6-336P-201ENST00000364891 107 ntBASIC0.37□□□□□ -2.35
TCRBV4S1A1TA0A5B7 SNORA72.2-201ENST00000365028 127 ntBASIC0.37□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNA5SP193-201ENST00000410353 107 ntBASIC0.37□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.37□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC073614.1-201ENST00000438690 650 ntBASIC0.37□□□□□ -2.35
TCRBV4S1A1TA0A5B7 MTND3P1-201ENST00000441336 220 ntBASIC0.37□□□□□ -2.35
TCRBV4S1A1TA0A5B7 BET1P1-201ENST00000482276 359 ntBASIC0.37□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNA5SP255-201ENST00000516370 107 ntBASIC0.37□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNU6-922P-201ENST00000516753 99 ntBASIC0.37□□□□□ -2.35
TCRBV4S1A1TA0A5B7 EIF4A1P12-201ENST00000551910 141 ntBASIC0.37□□□□□ -2.35
TCRBV4S1A1TA0A5B7 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.37□□□□□ -2.35
TCRBV4S1A1TA0A5B7 MIR1273G-201ENST00000577677 100 ntBASIC0.37□□□□□ -2.35
TCRBV4S1A1TA0A5B7 BNIP3P16-201ENST00000589779 534 ntBASIC0.37□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC112187.2-201ENST00000604345 283 ntBASIC0.37□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC243829.6-201ENST00000612652 106 ntBASIC0.37□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AL450472.1-202ENST00000637286 180 ntBASIC0.37□□□□□ -2.35
TCRBV4S1A1TA0A5B7 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.37□□□□□ -2.35
TCRBV4S1A1TA0A5B7 ELL2P3-201ENST00000457883 1602 ntBASIC0.37□□□□□ -2.35
TCRBV4S1A1TA0A5B7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC023934.1-201ENST00000574529 2389 ntBASIC0.37□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AL391994.1-201ENST00000254724 282 ntBASIC0.36□□□□□ -2.35
TCRBV4S1A1TA0A5B7 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNU6-545P-201ENST00000362681 104 ntBASIC0.36□□□□□ -2.35
TCRBV4S1A1TA0A5B7 Y_RNA.132-201ENST00000363421 102 ntBASIC0.36□□□□□ -2.35
TCRBV4S1A1TA0A5B7 SNORD18A-201ENST00000363753 72 ntBASIC0.36□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNU4-1-201ENST00000363925 141 ntBASIC0.36□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNU6-505P-201ENST00000384427 107 ntBASIC0.36□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNA5SP109-201ENST00000391010 116 ntBASIC0.36□□□□□ -2.35
TCRBV4S1A1TA0A5B7 MIR942-201ENST00000401111 86 ntBASIC0.36□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.36□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.36□□□□□ -2.35
TCRBV4S1A1TA0A5B7 HSFY7P-201ENST00000432672 318 ntBASIC0.36□□□□□ -2.35
TCRBV4S1A1TA0A5B7 USP9YP28-201ENST00000435142 589 ntBASIC0.36□□□□□ -2.35
TCRBV4S1A1TA0A5B7 HSFY8P-201ENST00000437934 318 ntBASIC0.36□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AL606517.2-201ENST00000442855 241 ntBASIC0.36□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.36□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AL358794.1-201ENST00000445689 381 ntBASIC0.36□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RPS26P48-201ENST00000491713 339 ntBASIC0.36□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.36□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.36□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.36□□□□□ -2.35
TCRBV4S1A1TA0A5B7 ZNF519P3-201ENST00000557158 1032 ntBASIC0.36□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC104465.1-201ENST00000611365 139 ntBASIC0.36□□□□□ -2.35
TCRBV4S1A1TA0A5B7 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms