Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 RNU6-418P-201ENST00000384035 107 ntBASIC-0.07□□□□□ -2.42
TRAV12-3A0A0B4J271 RNY1P4-201ENST00000384595 115 ntBASIC-0.07□□□□□ -2.42
TRAV12-3A0A0B4J271 RN7SKP200-201ENST00000410564 320 ntBASIC-0.07□□□□□ -2.42
TRAV12-3A0A0B4J271 RSL24D1P8-201ENST00000434442 492 ntBASIC-0.07□□□□□ -2.42
TRAV12-3A0A0B4J271 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.07□□□□□ -2.42
TRAV12-3A0A0B4J271 snoU13.18-201ENST00000459483 104 ntBASIC-0.07□□□□□ -2.42
TRAV12-3A0A0B4J271 RNU2-34P-201ENST00000516534 121 ntBASIC-0.07□□□□□ -2.42
TRAV12-3A0A0B4J271 RNU4-77P-201ENST00000516692 156 ntBASIC-0.07□□□□□ -2.42
TRAV12-3A0A0B4J271 AP003072.2-201ENST00000527756 676 ntBASIC-0.07□□□□□ -2.42
TRAV12-3A0A0B4J271 AP003327.1-201ENST00000529684 127 ntBASIC-0.07□□□□□ -2.42
TRAV12-3A0A0B4J271 AC087883.1-201ENST00000551882 391 ntBASIC-0.07□□□□□ -2.42
TRAV12-3A0A0B4J271 SUB1P2-201ENST00000556401 297 ntBASIC-0.07□□□□□ -2.42
TRAV12-3A0A0B4J271 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.07□□□□□ -2.42
TRAV12-3A0A0B4J271 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.07□□□□□ -2.42
TRAV12-3A0A0B4J271 VN1R87P-201ENST00000596706 487 ntBASIC-0.07□□□□□ -2.42
TRAV12-3A0A0B4J271 RPL17P51-201ENST00000605218 238 ntBASIC-0.07□□□□□ -2.42
TRAV12-3A0A0B4J271 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.07□□□□□ -2.42
TRAV12-3A0A0B4J271 FRG1KP-201ENST00000623592 341 ntBASIC-0.07□□□□□ -2.42
TRAV12-3A0A0B4J271 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC-0.07□□□□□ -2.42
TRAV12-3A0A0B4J271 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.08□□□□□ -2.42
TRAV12-3A0A0B4J271 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
TRAV12-3A0A0B4J271 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.08□□□□□ -2.42
TRAV12-3A0A0B4J271 RNU5E-6P-201ENST00000365574 115 ntBASIC-0.08□□□□□ -2.42
TRAV12-3A0A0B4J271 RNU6-468P-201ENST00000384003 109 ntBASIC-0.08□□□□□ -2.42
TRAV12-3A0A0B4J271 MIR660-201ENST00000385235 97 ntBASIC-0.08□□□□□ -2.42
TRAV12-3A0A0B4J271 AL451046.2-201ENST00000403074 277 ntBASIC-0.08□□□□□ -2.42
TRAV12-3A0A0B4J271 RN7SKP266-201ENST00000410232 287 ntBASIC-0.08□□□□□ -2.42
TRAV12-3A0A0B4J271 RNA5SP504-201ENST00000410676 117 ntBASIC-0.08□□□□□ -2.42
TRAV12-3A0A0B4J271 RNU6-177P-201ENST00000411257 104 ntBASIC-0.08□□□□□ -2.42
TRAV12-3A0A0B4J271 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.08□□□□□ -2.42
TRAV12-3A0A0B4J271 HMGN2P34-201ENST00000437647 269 ntBASIC-0.08□□□□□ -2.42
TRAV12-3A0A0B4J271 MTND2P30-201ENST00000456663 382 ntBASIC-0.08□□□□□ -2.42
TRAV12-3A0A0B4J271 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.08□□□□□ -2.42
TRAV12-3A0A0B4J271 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC-0.08□□□□□ -2.42
TRAV12-3A0A0B4J271 AC016256.1-201ENST00000547971 354 ntBASIC-0.08□□□□□ -2.42
TRAV12-3A0A0B4J271 RN7SL793P-201ENST00000583259 296 ntBASIC-0.08□□□□□ -2.42
TRAV12-3A0A0B4J271 AC131055.1-201ENST00000584626 316 ntBASIC-0.08□□□□□ -2.42
TRAV12-3A0A0B4J271 MIR548AC-201ENST00000585049 88 ntBASIC-0.08□□□□□ -2.42
TRAV12-3A0A0B4J271 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
TRAV12-3A0A0B4J271 AC099785.1-201ENST00000605697 437 ntBASIC-0.08□□□□□ -2.42
TRAV12-3A0A0B4J271 AL031775.1-201ENST00000607014 887 ntBASIC-0.08□□□□□ -2.42
TRAV12-3A0A0B4J271 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.08□□□□□ -2.42
TRAV12-3A0A0B4J271 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC-0.08□□□□□ -2.42
TRAV12-3A0A0B4J271 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-0.09□□□□□ -2.42
TRAV12-3A0A0B4J271 RNU6-222P-201ENST00000362438 107 ntBASIC-0.09□□□□□ -2.42
TRAV12-3A0A0B4J271 RNU6-199P-201ENST00000362954 107 ntBASIC-0.09□□□□□ -2.42
TRAV12-3A0A0B4J271 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.09□□□□□ -2.42
TRAV12-3A0A0B4J271 SNORA12.1-201ENST00000390873 148 ntBASIC-0.09□□□□□ -2.42
TRAV12-3A0A0B4J271 AL603865.2-201ENST00000401679 213 ntBASIC-0.09□□□□□ -2.42
TRAV12-3A0A0B4J271 MIR320C1-201ENST00000408566 88 ntBASIC-0.09□□□□□ -2.42
TRAV12-3A0A0B4J271 AL590135.1-201ENST00000422215 156 ntBASIC-0.09□□□□□ -2.42
TRAV12-3A0A0B4J271 AC019205.3-201ENST00000424573 156 ntBASIC-0.09□□□□□ -2.42
TRAV12-3A0A0B4J271 AC016700.2-201ENST00000446011 156 ntBASIC-0.09□□□□□ -2.42
TRAV12-3A0A0B4J271 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.09□□□□□ -2.42
TRAV12-3A0A0B4J271 AC015911.1-201ENST00000495111 156 ntBASIC-0.09□□□□□ -2.42
TRAV12-3A0A0B4J271 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
TRAV12-3A0A0B4J271 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC-0.09□□□□□ -2.42
TRAV12-3A0A0B4J271 MTND4LP26-201ENST00000518144 282 ntBASIC-0.09□□□□□ -2.42
TRAV12-3A0A0B4J271 AP002001.1-203ENST00000534002 267 ntBASIC-0.09□□□□□ -2.42
TRAV12-3A0A0B4J271 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.09□□□□□ -2.42
TRAV12-3A0A0B4J271 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.09□□□□□ -2.42
TRAV12-3A0A0B4J271 EIF1P4-201ENST00000572664 335 ntBASIC-0.09□□□□□ -2.42
TRAV12-3A0A0B4J271 MTND1P15-201ENST00000579262 949 ntBASIC-0.09□□□□□ -2.42
TRAV12-3A0A0B4J271 MIR3923-201ENST00000579521 83 ntBASIC-0.09□□□□□ -2.42
TRAV12-3A0A0B4J271 SNRPGP20-201ENST00000604477 205 ntBASIC-0.09□□□□□ -2.42
TRAV12-3A0A0B4J271 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.09□□□□□ -2.42
TRAV12-3A0A0B4J271 AC097372.5-201ENST00000623665 376 ntBASIC-0.09□□□□□ -2.42
TRAV12-3A0A0B4J271 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 MIR411-201ENST00000362239 96 ntBASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 RNU6-527P-201ENST00000363425 104 ntBASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 RNU6-960P-201ENST00000364056 120 ntBASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 snoZ40.1-201ENST00000364540 72 ntBASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 RNU6-793P-201ENST00000384233 104 ntBASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 VPS26BP1-201ENST00000417155 755 ntBASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 MTCYBP10-201ENST00000424905 650 ntBASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 TIMM9P3-201ENST00000428659 274 ntBASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 AL162725.1-201ENST00000435405 301 ntBASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 AC104332.1-201ENST00000440471 797 ntBASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 AL049829.1-201ENST00000465411 156 ntBASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 RPS23P5-201ENST00000495419 428 ntBASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 DEFB130C-202ENST00000530001 230 ntBASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 AC109810.1-201ENST00000534066 224 ntBASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 EIF4A1P12-201ENST00000551910 141 ntBASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 AL391903.3-201ENST00000612158 163 ntBASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 AC073349.3-201ENST00000617616 186 ntBASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 MIR8054-201ENST00000620877 86 ntBASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 AC093875.1-201ENST00000623688 504 ntBASIC-0.1□□□□□ -2.43
TRAV12-3A0A0B4J271 RNA5SP62-201ENST00000363457 110 ntBASIC-0.11□□□□□ -2.43
TRAV12-3A0A0B4J271 RNU6-511P-201ENST00000363496 107 ntBASIC-0.11□□□□□ -2.43
TRAV12-3A0A0B4J271 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.11□□□□□ -2.43
TRAV12-3A0A0B4J271 RNU4-56P-201ENST00000364700 142 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms