Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.32□□□□□ -1.88
U3KQE9 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.32□□□□□ -1.88
U3KQE9 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
U3KQE9 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
U3KQE9 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
U3KQE9 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
U3KQE9 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
U3KQE9 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
U3KQE9 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.31□□□□□ -1.88
U3KQE9 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
U3KQE9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
U3KQE9 RNU1-94P-201ENST00000362627 173 ntBASIC3.31□□□□□ -1.88
U3KQE9 RNU6-484P-201ENST00000384016 107 ntBASIC3.31□□□□□ -1.88
U3KQE9 SNORA26-201ENST00000391286 122 ntBASIC3.31□□□□□ -1.88
U3KQE9 AL603914.1-201ENST00000401964 204 ntBASIC3.31□□□□□ -1.88
U3KQE9 AL355796.1-201ENST00000406706 323 ntBASIC3.31□□□□□ -1.88
U3KQE9 MIR1283-1-201ENST00000408494 87 ntBASIC3.31□□□□□ -1.88
U3KQE9 RN7SKP177-201ENST00000410567 355 ntBASIC3.31□□□□□ -1.88
U3KQE9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.31□□□□□ -1.88
U3KQE9 RPL35AP15-201ENST00000468042 339 ntBASIC3.31□□□□□ -1.88
U3KQE9 RN7SL354P-201ENST00000469282 294 ntBASIC3.31□□□□□ -1.88
U3KQE9 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.31□□□□□ -1.88
U3KQE9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.31□□□□□ -1.88
U3KQE9 RNU5F-4P-201ENST00000516581 114 ntBASIC3.31□□□□□ -1.88
U3KQE9 AC069240.1-201ENST00000548774 375 ntBASIC3.31□□□□□ -1.88
U3KQE9 AC133485.4-201ENST00000561835 220 ntBASIC3.31□□□□□ -1.88
U3KQE9 CYP4A43P-201ENST00000568156 121 ntBASIC3.31□□□□□ -1.88
U3KQE9 AC138907.4-201ENST00000570107 226 ntBASIC3.31□□□□□ -1.88
U3KQE9 MIR2681-201ENST00000581814 105 ntBASIC3.31□□□□□ -1.88
U3KQE9 uc_338.13-201ENST00000618243 179 ntBASIC3.31□□□□□ -1.88
U3KQE9 snoZ196.1-201ENST00000625269 89 ntBASIC3.31□□□□□ -1.88
U3KQE9 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
U3KQE9 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
U3KQE9 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.31□□□□□ -1.88
U3KQE9 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
U3KQE9 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
U3KQE9 LINC02471-203ENST00000641941 4752 ntBASIC3.31□□□□□ -1.88
U3KQE9 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.31□□□□□ -1.88
U3KQE9 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.3□□□□□ -1.88
U3KQE9 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
U3KQE9 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
U3KQE9 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
U3KQE9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.3□□□□□ -1.88
U3KQE9 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
U3KQE9 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
U3KQE9 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
U3KQE9 RN7SKP103-201ENST00000363848 320 ntBASIC3.3□□□□□ -1.88
U3KQE9 RNA5SP175-201ENST00000364275 119 ntBASIC3.3□□□□□ -1.88
U3KQE9 RNU4-41P-201ENST00000364426 143 ntBASIC3.3□□□□□ -1.88
U3KQE9 SNORD18B-201ENST00000365659 72 ntBASIC3.3□□□□□ -1.88
U3KQE9 Y_RNA.587-201ENST00000391210 103 ntBASIC3.3□□□□□ -1.88
U3KQE9 HSPE1P26-201ENST00000405341 275 ntBASIC3.3□□□□□ -1.88
U3KQE9 RPS16P5-201ENST00000406501 404 ntBASIC3.3□□□□□ -1.88
U3KQE9 HLA-N-201ENST00000437516 135 ntBASIC3.3□□□□□ -1.88
U3KQE9 RBMY2UP-201ENST00000453474 324 ntBASIC3.3□□□□□ -1.88
U3KQE9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.3□□□□□ -1.88
U3KQE9 RNU6-221P-201ENST00000459541 99 ntBASIC3.3□□□□□ -1.88
U3KQE9 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.3□□□□□ -1.88
U3KQE9 AC006064.5-201ENST00000541782 248 ntBASIC3.3□□□□□ -1.88
U3KQE9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.3□□□□□ -1.88
U3KQE9 MIR4753-201ENST00000585119 83 ntBASIC3.3□□□□□ -1.88
U3KQE9 MIR432-201ENST00000606207 94 ntBASIC3.3□□□□□ -1.88
U3KQE9 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.3□□□□□ -1.88
U3KQE9 MIR7703-201ENST00000620784 77 ntBASIC3.3□□□□□ -1.88
U3KQE9 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.3□□□□□ -1.88
U3KQE9 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
U3KQE9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
U3KQE9 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
U3KQE9 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.3□□□□□ -1.88
U3KQE9 AC007256.1-201ENST00000392253 2765 ntBASIC3.29□□□□□ -1.88
U3KQE9 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
U3KQE9 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
U3KQE9 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
U3KQE9 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
U3KQE9 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.29□□□□□ -1.88
U3KQE9 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
U3KQE9 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
U3KQE9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
U3KQE9 MIR331-201ENST00000362302 94 ntBASIC3.29□□□□□ -1.88
U3KQE9 snoU2_19.1-201ENST00000362361 80 ntBASIC3.29□□□□□ -1.88
U3KQE9 SNORD116-13-201ENST00000384408 92 ntBASIC3.29□□□□□ -1.88
U3KQE9 SNORD116-21-201ENST00000384507 92 ntBASIC3.29□□□□□ -1.88
U3KQE9 AL139095.1-201ENST00000404326 391 ntBASIC3.29□□□□□ -1.88
U3KQE9 AC023449.1-201ENST00000454464 154 ntBASIC3.29□□□□□ -1.88
U3KQE9 AC010099.1-201ENST00000455434 375 ntBASIC3.29□□□□□ -1.88
U3KQE9 Y_RNA.651-201ENST00000459380 103 ntBASIC3.29□□□□□ -1.88
U3KQE9 RPL36AP48-201ENST00000485521 314 ntBASIC3.29□□□□□ -1.88
U3KQE9 AC083906.5-201ENST00000503722 328 ntBASIC3.29□□□□□ -1.88
U3KQE9 SNORD33.1-201ENST00000516213 88 ntBASIC3.29□□□□□ -1.88
U3KQE9 RNA5SP73-201ENST00000516744 108 ntBASIC3.29□□□□□ -1.88
U3KQE9 AP000867.2-201ENST00000532468 320 ntBASIC3.29□□□□□ -1.88
U3KQE9 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.29□□□□□ -1.88
U3KQE9 AC106785.1-201ENST00000565935 262 ntBASIC3.29□□□□□ -1.88
U3KQE9 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.29□□□□□ -1.88
U3KQE9 AC091178.2-201ENST00000584401 117 ntBASIC3.29□□□□□ -1.88
U3KQE9 AC113403.1-201ENST00000604910 193 ntBASIC3.29□□□□□ -1.88
U3KQE9 FAM27D1-201ENST00000612308 341 ntBASIC3.29□□□□□ -1.88
U3KQE9 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
U3KQE9 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
U3KQE9 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms