Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 RPL32P35-201ENST00000415214 394 ntBASIC4.51□□□□□ -1.69
GTF3C3Q9Y5Q9 AL390729.2-201ENST00000416137 156 ntBASIC4.51□□□□□ -1.69
GTF3C3Q9Y5Q9 MTND3P2-201ENST00000438452 342 ntBASIC4.51□□□□□ -1.69
GTF3C3Q9Y5Q9 UQCRHP3-201ENST00000451503 251 ntBASIC4.51□□□□□ -1.69
GTF3C3Q9Y5Q9 RNU6-625P-201ENST00000459412 107 ntBASIC4.51□□□□□ -1.69
GTF3C3Q9Y5Q9 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
GTF3C3Q9Y5Q9 AC010655.3-201ENST00000478818 450 ntBASIC4.51□□□□□ -1.69
GTF3C3Q9Y5Q9 AC110794.1-201ENST00000505816 425 ntBASIC4.51□□□□□ -1.69
GTF3C3Q9Y5Q9 RNY3P15-201ENST00000516297 97 ntBASIC4.51□□□□□ -1.69
GTF3C3Q9Y5Q9 MIR4270-201ENST00000581799 70 ntBASIC4.51□□□□□ -1.69
GTF3C3Q9Y5Q9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.51□□□□□ -1.69
GTF3C3Q9Y5Q9 RAC1P9-201ENST00000604990 392 ntBASIC4.51□□□□□ -1.69
GTF3C3Q9Y5Q9 MIR1248-201ENST00000629190 106 ntBASIC4.51□□□□□ -1.69
GTF3C3Q9Y5Q9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.51□□□□□ -1.69
GTF3C3Q9Y5Q9 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GTF3C3Q9Y5Q9 AC135776.4-201ENST00000624300 1904 ntBASIC4.5□□□□□ -1.69
GTF3C3Q9Y5Q9 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
GTF3C3Q9Y5Q9 RNU6-1309P-201ENST00000363305 108 ntBASIC4.5□□□□□ -1.69
GTF3C3Q9Y5Q9 U3.8-201ENST00000363675 217 ntBASIC4.5□□□□□ -1.69
GTF3C3Q9Y5Q9 Y_RNA.230-201ENST00000364348 109 ntBASIC4.5□□□□□ -1.69
GTF3C3Q9Y5Q9 RNU6-1305P-201ENST00000364353 104 ntBASIC4.5□□□□□ -1.69
GTF3C3Q9Y5Q9 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
GTF3C3Q9Y5Q9 MIR548F4-201ENST00000408515 105 ntBASIC4.5□□□□□ -1.69
GTF3C3Q9Y5Q9 AC004866.1-201ENST00000411748 78 ntBASIC4.5□□□□□ -1.69
GTF3C3Q9Y5Q9 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.5□□□□□ -1.69
GTF3C3Q9Y5Q9 AC006466.1-201ENST00000438721 289 ntBASIC4.5□□□□□ -1.69
GTF3C3Q9Y5Q9 AL731563.1-201ENST00000442202 214 ntBASIC4.5□□□□□ -1.69
GTF3C3Q9Y5Q9 HMGN2P18-201ENST00000450680 270 ntBASIC4.5□□□□□ -1.69
GTF3C3Q9Y5Q9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.5□□□□□ -1.69
GTF3C3Q9Y5Q9 MTATP8P1-201ENST00000467115 207 ntBASIC4.5□□□□□ -1.69
GTF3C3Q9Y5Q9 RNU6-397P-201ENST00000516226 104 ntBASIC4.5□□□□□ -1.69
GTF3C3Q9Y5Q9 RNU6-107P-201ENST00000516643 102 ntBASIC4.5□□□□□ -1.69
GTF3C3Q9Y5Q9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.49□□□□□ -1.69
GTF3C3Q9Y5Q9 Y_RNA.133-201ENST00000363428 110 ntBASIC4.49□□□□□ -1.69
GTF3C3Q9Y5Q9 SNORA25B-201ENST00000365507 128 ntBASIC4.49□□□□□ -1.69
GTF3C3Q9Y5Q9 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.49□□□□□ -1.69
GTF3C3Q9Y5Q9 MIR1283-1-201ENST00000408494 87 ntBASIC4.49□□□□□ -1.69
GTF3C3Q9Y5Q9 RNA5SP344-201ENST00000411081 104 ntBASIC4.49□□□□□ -1.69
GTF3C3Q9Y5Q9 Z75741.1-201ENST00000446793 314 ntBASIC4.49□□□□□ -1.69
GTF3C3Q9Y5Q9 SRIP1-201ENST00000489235 288 ntBASIC4.49□□□□□ -1.69
GTF3C3Q9Y5Q9 RNA5SP490-201ENST00000517141 136 ntBASIC4.49□□□□□ -1.69
GTF3C3Q9Y5Q9 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC4.49□□□□□ -1.69
GTF3C3Q9Y5Q9 AC011476.5-201ENST00000615594 130 ntBASIC4.49□□□□□ -1.69
GTF3C3Q9Y5Q9 AC130454.1-201ENST00000622948 401 ntBASIC4.49□□□□□ -1.69
GTF3C3Q9Y5Q9 AC008873.1-201ENST00000625051 138 ntBASIC4.49□□□□□ -1.69
GTF3C3Q9Y5Q9 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
GTF3C3Q9Y5Q9 LINC02555-201ENST00000563933 1951 ntBASIC4.48□□□□□ -1.69
GTF3C3Q9Y5Q9 RNA5SP119-201ENST00000362715 117 ntBASIC4.48□□□□□ -1.69
GTF3C3Q9Y5Q9 RNU6-626P-201ENST00000363354 107 ntBASIC4.48□□□□□ -1.69
GTF3C3Q9Y5Q9 Y_RNA.214-201ENST00000364201 112 ntBASIC4.48□□□□□ -1.69
GTF3C3Q9Y5Q9 Y_RNA.415-201ENST00000384012 112 ntBASIC4.48□□□□□ -1.69
GTF3C3Q9Y5Q9 RNU6-713P-201ENST00000384761 107 ntBASIC4.48□□□□□ -1.69
GTF3C3Q9Y5Q9 AL079342.1-201ENST00000401460 267 ntBASIC4.48□□□□□ -1.69
GTF3C3Q9Y5Q9 BMS1P22-201ENST00000414726 313 ntBASIC4.48□□□□□ -1.69
GTF3C3Q9Y5Q9 AL139281.1-201ENST00000422120 335 ntBASIC4.48□□□□□ -1.69
GTF3C3Q9Y5Q9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC4.48□□□□□ -1.69
GTF3C3Q9Y5Q9 MIR8059-201ENST00000620427 81 ntBASIC4.48□□□□□ -1.69
GTF3C3Q9Y5Q9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
GTF3C3Q9Y5Q9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
GTF3C3Q9Y5Q9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
GTF3C3Q9Y5Q9 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.47□□□□□ -1.69
GTF3C3Q9Y5Q9 SNORD63-201ENST00000384262 68 ntBASIC4.47□□□□□ -1.69
GTF3C3Q9Y5Q9 SNORA67.2-201ENST00000384300 149 ntBASIC4.47□□□□□ -1.69
GTF3C3Q9Y5Q9 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
GTF3C3Q9Y5Q9 RPS16P5-201ENST00000406501 404 ntBASIC4.47□□□□□ -1.69
GTF3C3Q9Y5Q9 RNA5SP492-201ENST00000411330 114 ntBASIC4.47□□□□□ -1.69
GTF3C3Q9Y5Q9 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.47□□□□□ -1.69
GTF3C3Q9Y5Q9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
GTF3C3Q9Y5Q9 MTCO2P24-201ENST00000515611 426 ntBASIC4.47□□□□□ -1.69
GTF3C3Q9Y5Q9 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.47□□□□□ -1.69
GTF3C3Q9Y5Q9 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.47□□□□□ -1.69
GTF3C3Q9Y5Q9 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
GTF3C3Q9Y5Q9 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
GTF3C3Q9Y5Q9 AC093908.1-201ENST00000623125 8092 ntBASIC4.47□□□□□ -1.69
GTF3C3Q9Y5Q9 AC017071.1-201ENST00000564407 2204 ntBASIC4.46□□□□□ -1.69
GTF3C3Q9Y5Q9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
GTF3C3Q9Y5Q9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.46□□□□□ -1.7
GTF3C3Q9Y5Q9 RNU6-545P-201ENST00000362681 104 ntBASIC4.46□□□□□ -1.7
GTF3C3Q9Y5Q9 Y_RNA.143-201ENST00000363520 106 ntBASIC4.46□□□□□ -1.7
GTF3C3Q9Y5Q9 RNA5SP130-201ENST00000364431 114 ntBASIC4.46□□□□□ -1.7
GTF3C3Q9Y5Q9 SNORA72.2-201ENST00000365028 127 ntBASIC4.46□□□□□ -1.7
GTF3C3Q9Y5Q9 RNU6-1264P-201ENST00000383891 107 ntBASIC4.46□□□□□ -1.7
GTF3C3Q9Y5Q9 Y_RNA.574-201ENST00000384766 95 ntBASIC4.46□□□□□ -1.7
GTF3C3Q9Y5Q9 RPL21P1-201ENST00000399532 476 ntBASIC4.46□□□□□ -1.7
GTF3C3Q9Y5Q9 ELOCP21-201ENST00000412558 336 ntBASIC4.46□□□□□ -1.7
GTF3C3Q9Y5Q9 AL772161.1-201ENST00000439130 476 ntBASIC4.46□□□□□ -1.7
GTF3C3Q9Y5Q9 RNU6-667P-201ENST00000517186 102 ntBASIC4.46□□□□□ -1.7
GTF3C3Q9Y5Q9 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.46□□□□□ -1.7
GTF3C3Q9Y5Q9 AC078899.3-201ENST00000599065 212 ntBASIC4.46□□□□□ -1.7
GTF3C3Q9Y5Q9 AL357075.2-201ENST00000614906 189 ntBASIC4.46□□□□□ -1.7
GTF3C3Q9Y5Q9 MIR6780A-201ENST00000615089 68 ntBASIC4.46□□□□□ -1.7
GTF3C3Q9Y5Q9 U6.104-201ENST00000637979 90 ntBASIC4.46□□□□□ -1.7
GTF3C3Q9Y5Q9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
GTF3C3Q9Y5Q9 AC009487.4-201ENST00000624969 3585 ntBASIC4.46□□□□□ -1.7
GTF3C3Q9Y5Q9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
GTF3C3Q9Y5Q9 Y_RNA.19-201ENST00000362462 99 ntBASIC4.45□□□□□ -1.7
GTF3C3Q9Y5Q9 Y_RNA.47-201ENST00000362697 108 ntBASIC4.45□□□□□ -1.7
GTF3C3Q9Y5Q9 RNU6-238P-201ENST00000363313 106 ntBASIC4.45□□□□□ -1.7
GTF3C3Q9Y5Q9 RNU6-743P-201ENST00000364151 106 ntBASIC4.45□□□□□ -1.7
GTF3C3Q9Y5Q9 DBIP2-201ENST00000419076 262 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms