Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 EEF1B2P7-201ENST00000451177 676 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 snoU13.6-201ENST00000458785 104 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 RNU7-169P-201ENST00000459456 61 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 RN7SL863P-201ENST00000462370 296 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 AC145146.1-201ENST00000496370 254 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 RN7SKP282-201ENST00000516824 299 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 AC022616.4-201ENST00000522985 181 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 AP002404.1-201ENST00000532005 451 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 AC006600.1-201ENST00000572529 153 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 AC078899.3-201ENST00000599065 212 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 RPS29P30-201ENST00000600975 111 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 AC138305.3-201ENST00000624988 240 ntBASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDHGA3Q9Y5H0 BX322639.1-202ENST00000423987 2213 ntBASIC3.09□□□□□ -1.91
PCDHGA3Q9Y5H0 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGA3Q9Y5H0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGA3Q9Y5H0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.09□□□□□ -1.91
PCDHGA3Q9Y5H0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGA3Q9Y5H0 SNORA7.4-201ENST00000384249 137 ntBASIC3.09□□□□□ -1.91
PCDHGA3Q9Y5H0 RNU6-159P-201ENST00000391080 106 ntBASIC3.09□□□□□ -1.91
PCDHGA3Q9Y5H0 RPL21P3-201ENST00000395517 478 ntBASIC3.09□□□□□ -1.91
PCDHGA3Q9Y5H0 RNU6-101P-201ENST00000410323 104 ntBASIC3.09□□□□□ -1.91
PCDHGA3Q9Y5H0 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.09□□□□□ -1.91
PCDHGA3Q9Y5H0 AP000705.1-201ENST00000454567 350 ntBASIC3.09□□□□□ -1.91
PCDHGA3Q9Y5H0 AL353752.1-201ENST00000454946 260 ntBASIC3.09□□□□□ -1.91
PCDHGA3Q9Y5H0 AC112492.4-201ENST00000456549 352 ntBASIC3.09□□□□□ -1.91
PCDHGA3Q9Y5H0 AC146507.2-201ENST00000460608 476 ntBASIC3.09□□□□□ -1.91
PCDHGA3Q9Y5H0 CKS1BP2-201ENST00000497342 240 ntBASIC3.09□□□□□ -1.91
PCDHGA3Q9Y5H0 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.09□□□□□ -1.91
PCDHGA3Q9Y5H0 RNU6-1045P-201ENST00000516321 107 ntBASIC3.09□□□□□ -1.91
PCDHGA3Q9Y5H0 SNORA31.26-201ENST00000517250 137 ntBASIC3.09□□□□□ -1.91
PCDHGA3Q9Y5H0 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.09□□□□□ -1.91
PCDHGA3Q9Y5H0 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.09□□□□□ -1.91
PCDHGA3Q9Y5H0 AC027288.2-201ENST00000553028 243 ntBASIC3.09□□□□□ -1.91
PCDHGA3Q9Y5H0 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHGA3Q9Y5H0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHGA3Q9Y5H0 AC018692.3-201ENST00000623929 123 ntBASIC3.09□□□□□ -1.91
PCDHGA3Q9Y5H0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
PCDHGA3Q9Y5H0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
PCDHGA3Q9Y5H0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
PCDHGA3Q9Y5H0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PCDHGA3Q9Y5H0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHGA3Q9Y5H0 AC093010.3-201ENST00000570269 15214 ntBASIC3.08□□□□□ -1.92
PCDHGA3Q9Y5H0 snoU2_19.1-201ENST00000362361 80 ntBASIC3.08□□□□□ -1.92
PCDHGA3Q9Y5H0 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.08□□□□□ -1.92
PCDHGA3Q9Y5H0 SNORA63.7-201ENST00000365579 123 ntBASIC3.08□□□□□ -1.92
PCDHGA3Q9Y5H0 Y_RNA.380-201ENST00000365663 111 ntBASIC3.08□□□□□ -1.92
PCDHGA3Q9Y5H0 Y_RNA.500-201ENST00000384466 111 ntBASIC3.08□□□□□ -1.92
PCDHGA3Q9Y5H0 Y_RNA.557-201ENST00000384680 107 ntBASIC3.08□□□□□ -1.92
PCDHGA3Q9Y5H0 RN7SKP220-201ENST00000410611 288 ntBASIC3.08□□□□□ -1.92
PCDHGA3Q9Y5H0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHGA3Q9Y5H0 AC104332.2-201ENST00000429959 156 ntBASIC3.08□□□□□ -1.92
PCDHGA3Q9Y5H0 CBX3P6-201ENST00000430257 527 ntBASIC3.08□□□□□ -1.92
PCDHGA3Q9Y5H0 AC244505.4-201ENST00000434905 287 ntBASIC3.08□□□□□ -1.92
PCDHGA3Q9Y5H0 SSXP5-201ENST00000443473 287 ntBASIC3.08□□□□□ -1.92
PCDHGA3Q9Y5H0 AC132942.1-201ENST00000486753 483 ntBASIC3.08□□□□□ -1.92
PCDHGA3Q9Y5H0 RNU6-586P-201ENST00000517265 104 ntBASIC3.08□□□□□ -1.92
PCDHGA3Q9Y5H0 CYCSP23-201ENST00000519781 313 ntBASIC3.08□□□□□ -1.92
PCDHGA3Q9Y5H0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHGA3Q9Y5H0 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.08□□□□□ -1.92
PCDHGA3Q9Y5H0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHGA3Q9Y5H0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
PCDHGA3Q9Y5H0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
PCDHGA3Q9Y5H0 RNU6-874P-201ENST00000362390 105 ntBASIC3.07□□□□□ -1.92
PCDHGA3Q9Y5H0 SNORA80A-201ENST00000363922 136 ntBASIC3.07□□□□□ -1.92
PCDHGA3Q9Y5H0 RNU6-378P-201ENST00000384324 107 ntBASIC3.07□□□□□ -1.92
PCDHGA3Q9Y5H0 RNU6-738P-201ENST00000384531 106 ntBASIC3.07□□□□□ -1.92
PCDHGA3Q9Y5H0 MIR627-201ENST00000384979 97 ntBASIC3.07□□□□□ -1.92
PCDHGA3Q9Y5H0 RNU2-63P-201ENST00000410792 194 ntBASIC3.07□□□□□ -1.92
PCDHGA3Q9Y5H0 RN7SKP58-201ENST00000411010 305 ntBASIC3.07□□□□□ -1.92
PCDHGA3Q9Y5H0 RNA5SP344-201ENST00000411081 104 ntBASIC3.07□□□□□ -1.92
PCDHGA3Q9Y5H0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.07□□□□□ -1.92
PCDHGA3Q9Y5H0 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.07□□□□□ -1.92
PCDHGA3Q9Y5H0 AP000870.1-201ENST00000472927 406 ntBASIC3.07□□□□□ -1.92
PCDHGA3Q9Y5H0 RNU6-327P-201ENST00000516270 127 ntBASIC3.07□□□□□ -1.92
PCDHGA3Q9Y5H0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.07□□□□□ -1.92
PCDHGA3Q9Y5H0 AL442163.3-201ENST00000554110 156 ntBASIC3.07□□□□□ -1.92
PCDHGA3Q9Y5H0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.07□□□□□ -1.92
PCDHGA3Q9Y5H0 MIR5188-201ENST00000583467 113 ntBASIC3.07□□□□□ -1.92
PCDHGA3Q9Y5H0 SNORD58B-201ENST00000607313 66 ntBASIC3.07□□□□□ -1.92
PCDHGA3Q9Y5H0 uc_338.1-201ENST00000612113 180 ntBASIC3.07□□□□□ -1.92
PCDHGA3Q9Y5H0 AC005296.1-201ENST00000616145 209 ntBASIC3.07□□□□□ -1.92
PCDHGA3Q9Y5H0 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.07□□□□□ -1.92
PCDHGA3Q9Y5H0 MIR6852-201ENST00000621699 66 ntBASIC3.07□□□□□ -1.92
PCDHGA3Q9Y5H0 AC090517.3-201ENST00000625170 141 ntBASIC3.07□□□□□ -1.92
PCDHGA3Q9Y5H0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.07□□□□□ -1.92
PCDHGA3Q9Y5H0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHGA3Q9Y5H0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 AC093831.2-201ENST00000624393 3427 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 Y_RNA.27-201ENST00000362540 103 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 RNU1-70P-201ENST00000362618 164 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 Y_RNA.152-201ENST00000363578 100 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 RNU4-50P-201ENST00000364361 141 ntBASIC3.06□□□□□ -1.92
PCDHGA3Q9Y5H0 U8.9-201ENST00000365667 134 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms