Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM35Q9UPQ4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM35Q9UPQ4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM35Q9UPQ4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM35Q9UPQ4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM35Q9UPQ4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
TRIM35Q9UPQ4 Y_RNA.10-201ENST00000362371 110 ntBASIC5.51□□□□□ -1.53
TRIM35Q9UPQ4 RNU6-600P-201ENST00000362524 99 ntBASIC5.51□□□□□ -1.53
TRIM35Q9UPQ4 RNU6-644P-201ENST00000391155 98 ntBASIC5.51□□□□□ -1.53
TRIM35Q9UPQ4 AC096949.1-201ENST00000412047 152 ntBASIC5.51□□□□□ -1.53
TRIM35Q9UPQ4 RNA5SP246-201ENST00000458909 119 ntBASIC5.51□□□□□ -1.53
TRIM35Q9UPQ4 RN7SL41P-201ENST00000476144 297 ntBASIC5.51□□□□□ -1.53
TRIM35Q9UPQ4 SCARNA15-202ENST00000516881 127 ntBASIC5.51□□□□□ -1.53
TRIM35Q9UPQ4 MIR4697-201ENST00000582977 78 ntBASIC5.51□□□□□ -1.53
TRIM35Q9UPQ4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM35Q9UPQ4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC5.51□□□□□ -1.53
TRIM35Q9UPQ4 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
TRIM35Q9UPQ4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM35Q9UPQ4 AC104260.2-201ENST00000623551 3497 ntBASIC5.5□□□□□ -1.53
TRIM35Q9UPQ4 RNU1-94P-201ENST00000362627 173 ntBASIC5.5□□□□□ -1.53
TRIM35Q9UPQ4 RNU4-13P-201ENST00000364019 141 ntBASIC5.5□□□□□ -1.53
TRIM35Q9UPQ4 RNU6-1305P-201ENST00000364353 104 ntBASIC5.5□□□□□ -1.53
TRIM35Q9UPQ4 Y_RNA.426-201ENST00000384068 113 ntBASIC5.5□□□□□ -1.53
TRIM35Q9UPQ4 HDGFP1-201ENST00000405943 252 ntBASIC5.5□□□□□ -1.53
TRIM35Q9UPQ4 MIR1912-201ENST00000410389 80 ntBASIC5.5□□□□□ -1.53
TRIM35Q9UPQ4 AC245291.1-201ENST00000419501 328 ntBASIC5.5□□□□□ -1.53
TRIM35Q9UPQ4 SNORD116-26-201ENST00000516006 96 ntBASIC5.5□□□□□ -1.53
TRIM35Q9UPQ4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM35Q9UPQ4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM35Q9UPQ4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM35Q9UPQ4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM35Q9UPQ4 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM35Q9UPQ4 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM35Q9UPQ4 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
TRIM35Q9UPQ4 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM35Q9UPQ4 Z73965.1-201ENST00000623412 2297 ntBASIC5.49□□□□□ -1.53
TRIM35Q9UPQ4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM35Q9UPQ4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM35Q9UPQ4 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM35Q9UPQ4 RPS29P19-201ENST00000479709 171 ntBASIC5.49□□□□□ -1.53
TRIM35Q9UPQ4 RNU6-63P-201ENST00000516690 95 ntBASIC5.49□□□□□ -1.53
TRIM35Q9UPQ4 PARP1P2-201ENST00000556806 195 ntBASIC5.49□□□□□ -1.53
TRIM35Q9UPQ4 Six3os1_7.1-201ENST00000621512 201 ntBASIC5.49□□□□□ -1.53
TRIM35Q9UPQ4 MIR492-201ENST00000638676 116 ntBASIC5.49□□□□□ -1.53
TRIM35Q9UPQ4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM35Q9UPQ4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM35Q9UPQ4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
TRIM35Q9UPQ4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM35Q9UPQ4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM35Q9UPQ4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM35Q9UPQ4 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 RNU6-486P-201ENST00000363116 107 ntBASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 RN7SKP280-201ENST00000364196 304 ntBASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 RNU6-418P-201ENST00000384035 107 ntBASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 MIR586-201ENST00000385035 97 ntBASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 RNA5SP317-201ENST00000410176 116 ntBASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 RNA5SP311-201ENST00000411290 116 ntBASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 AC004975.1-201ENST00000428733 208 ntBASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 AL445584.1-201ENST00000431451 330 ntBASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 HMGN2P20-201ENST00000437531 273 ntBASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 AC010285.1-201ENST00000470580 392 ntBASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 AC096725.1-201ENST00000514266 313 ntBASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 RNA5SP315-201ENST00000516340 116 ntBASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 RNA5SP312-201ENST00000517068 116 ntBASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 AC022655.2-201ENST00000577280 318 ntBASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 MIR7154-201ENST00000620673 73 ntBASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM35Q9UPQ4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 RNU4-15P-201ENST00000362613 141 ntBASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 RNU6-1099P-201ENST00000363533 107 ntBASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 RNU6-884P-201ENST00000363889 107 ntBASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 Y_RNA.796-201ENST00000364268 102 ntBASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 Y_RNA.799-201ENST00000364992 102 ntBASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 RNU6-816P-201ENST00000390914 107 ntBASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 RNU6-1268P-201ENST00000391214 107 ntBASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 RNU6-1239P-201ENST00000391310 107 ntBASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 AL356095.1-201ENST00000417217 199 ntBASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 AC004941.2-201ENST00000427009 228 ntBASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 SNORA31.9-201ENST00000516429 84 ntBASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 RNU6-267P-201ENST00000516714 103 ntBASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 ACA59.2-201ENST00000517061 156 ntBASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 AC006272.2-201ENST00000594725 163 ntBASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 MIR6867-201ENST00000610636 67 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms