Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 RNU6-348P-201ENST00000384386 107 ntBASIC1.5□□□□□ -2.17
CDH9Q9ULB4 AF228730.1-201ENST00000397972 663 ntBASIC1.5□□□□□ -2.17
CDH9Q9ULB4 FGF7P8-201ENST00000402994 292 ntBASIC1.5□□□□□ -2.17
CDH9Q9ULB4 RNU2-41P-201ENST00000410991 178 ntBASIC1.5□□□□□ -2.17
CDH9Q9ULB4 MTATP6P18-201ENST00000417994 673 ntBASIC1.5□□□□□ -2.17
CDH9Q9ULB4 AC139712.2-201ENST00000424302 339 ntBASIC1.5□□□□□ -2.17
CDH9Q9ULB4 AL358934.1-201ENST00000432346 324 ntBASIC1.5□□□□□ -2.17
CDH9Q9ULB4 CETN4P-201ENST00000432407 469 ntBASIC1.5□□□□□ -2.17
CDH9Q9ULB4 AC002486.1-201ENST00000435098 391 ntBASIC1.5□□□□□ -2.17
CDH9Q9ULB4 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.5□□□□□ -2.17
CDH9Q9ULB4 HMGB1P18-201ENST00000438801 619 ntBASIC1.5□□□□□ -2.17
CDH9Q9ULB4 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.5□□□□□ -2.17
CDH9Q9ULB4 RPL31P3-201ENST00000458430 332 ntBASIC1.5□□□□□ -2.17
CDH9Q9ULB4 RNU6-567P-201ENST00000516746 107 ntBASIC1.5□□□□□ -2.17
CDH9Q9ULB4 RNU6-430P-201ENST00000517078 107 ntBASIC1.5□□□□□ -2.17
CDH9Q9ULB4 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.5□□□□□ -2.17
CDH9Q9ULB4 EIF4A1P12-201ENST00000551910 141 ntBASIC1.5□□□□□ -2.17
CDH9Q9ULB4 AC021231.3-201ENST00000558497 370 ntBASIC1.5□□□□□ -2.17
CDH9Q9ULB4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.5□□□□□ -2.17
CDH9Q9ULB4 AL391840.1-201ENST00000571144 367 ntBASIC1.5□□□□□ -2.17
CDH9Q9ULB4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.5□□□□□ -2.17
CDH9Q9ULB4 AC008088.1-201ENST00000580993 280 ntBASIC1.5□□□□□ -2.17
CDH9Q9ULB4 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.5□□□□□ -2.17
CDH9Q9ULB4 Z98751.3-201ENST00000604447 521 ntBASIC1.5□□□□□ -2.17
CDH9Q9ULB4 U2.17-201ENST00000611454 95 ntBASIC1.5□□□□□ -2.17
CDH9Q9ULB4 AL450472.1-202ENST00000637286 180 ntBASIC1.5□□□□□ -2.17
CDH9Q9ULB4 AC245060.5-201ENST00000610778 3293 ntBASIC1.49□□□□□ -2.17
CDH9Q9ULB4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CDH9Q9ULB4 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CDH9Q9ULB4 RNU6-112P-201ENST00000363599 104 ntBASIC1.49□□□□□ -2.17
CDH9Q9ULB4 RNU6-378P-201ENST00000384324 107 ntBASIC1.49□□□□□ -2.17
CDH9Q9ULB4 Y_RNA.504-201ENST00000384481 104 ntBASIC1.49□□□□□ -2.17
CDH9Q9ULB4 AC068050.1-201ENST00000394891 380 ntBASIC1.49□□□□□ -2.17
CDH9Q9ULB4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.49□□□□□ -2.17
CDH9Q9ULB4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.49□□□□□ -2.17
CDH9Q9ULB4 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.49□□□□□ -2.17
CDH9Q9ULB4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.49□□□□□ -2.17
CDH9Q9ULB4 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.49□□□□□ -2.17
CDH9Q9ULB4 USP9YP29-201ENST00000445112 563 ntBASIC1.49□□□□□ -2.17
CDH9Q9ULB4 AC007547.1-201ENST00000462177 490 ntBASIC1.49□□□□□ -2.17
CDH9Q9ULB4 AC087477.1-201ENST00000465747 340 ntBASIC1.49□□□□□ -2.17
CDH9Q9ULB4 AC097473.1-201ENST00000508142 408 ntBASIC1.49□□□□□ -2.17
CDH9Q9ULB4 AC025465.3-201ENST00000510570 311 ntBASIC1.49□□□□□ -2.17
CDH9Q9ULB4 AC091874.1-201ENST00000511402 339 ntBASIC1.49□□□□□ -2.17
CDH9Q9ULB4 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.49□□□□□ -2.17
CDH9Q9ULB4 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.49□□□□□ -2.17
CDH9Q9ULB4 MTCO2P4-201ENST00000517968 247 ntBASIC1.49□□□□□ -2.17
CDH9Q9ULB4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.49□□□□□ -2.17
CDH9Q9ULB4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.49□□□□□ -2.17
CDH9Q9ULB4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.49□□□□□ -2.17
CDH9Q9ULB4 CYP4A27P-201ENST00000567218 190 ntBASIC1.49□□□□□ -2.17
CDH9Q9ULB4 MIR4421-201ENST00000578133 69 ntBASIC1.49□□□□□ -2.17
CDH9Q9ULB4 MIR5094-201ENST00000578766 85 ntBASIC1.49□□□□□ -2.17
CDH9Q9ULB4 AC023043.2-201ENST00000589678 1026 ntBASIC1.49□□□□□ -2.17
CDH9Q9ULB4 AC016727.1-205ENST00000605437 569 ntBASIC1.49□□□□□ -2.17
CDH9Q9ULB4 AC009509.4-201ENST00000619202 509 ntBASIC1.49□□□□□ -2.17
CDH9Q9ULB4 AC136475.10-201ENST00000620253 385 ntBASIC1.49□□□□□ -2.17
CDH9Q9ULB4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.49□□□□□ -2.17
CDH9Q9ULB4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.49□□□□□ -2.17
CDH9Q9ULB4 WWP1P1-201ENST00000466609 2769 ntBASIC1.48□□□□□ -2.17
CDH9Q9ULB4 Y_RNA.338-201ENST00000365320 114 ntBASIC1.48□□□□□ -2.17
CDH9Q9ULB4 SNORA12.2-201ENST00000391040 156 ntBASIC1.48□□□□□ -2.17
CDH9Q9ULB4 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.48□□□□□ -2.17
CDH9Q9ULB4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CDH9Q9ULB4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CDH9Q9ULB4 RNU7-14P-201ENST00000459331 62 ntBASIC1.48□□□□□ -2.17
CDH9Q9ULB4 TOMM22P6-201ENST00000465035 409 ntBASIC1.48□□□□□ -2.17
CDH9Q9ULB4 AC005908.1-201ENST00000468701 347 ntBASIC1.48□□□□□ -2.17
CDH9Q9ULB4 AC008628.2-201ENST00000502605 298 ntBASIC1.48□□□□□ -2.17
CDH9Q9ULB4 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.48□□□□□ -2.17
CDH9Q9ULB4 RNU5F-4P-201ENST00000516581 114 ntBASIC1.48□□□□□ -2.17
CDH9Q9ULB4 RNU6-1098P-201ENST00000516772 96 ntBASIC1.48□□□□□ -2.17
CDH9Q9ULB4 SUMO2P18-201ENST00000518873 252 ntBASIC1.48□□□□□ -2.17
CDH9Q9ULB4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.48□□□□□ -2.17
CDH9Q9ULB4 HIF1AP1-201ENST00000553642 175 ntBASIC1.48□□□□□ -2.17
CDH9Q9ULB4 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.48□□□□□ -2.17
CDH9Q9ULB4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.48□□□□□ -2.17
CDH9Q9ULB4 MTATP6P3-201ENST00000581686 676 ntBASIC1.48□□□□□ -2.17
CDH9Q9ULB4 Z99497.2-201ENST00000603634 310 ntBASIC1.48□□□□□ -2.17
CDH9Q9ULB4 RNU6-85P-201ENST00000605989 107 ntBASIC1.48□□□□□ -2.17
CDH9Q9ULB4 AC097520.1-201ENST00000624435 385 ntBASIC1.48□□□□□ -2.17
CDH9Q9ULB4 MIR3974-201ENST00000637126 96 ntBASIC1.48□□□□□ -2.17
CDH9Q9ULB4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.48□□□□□ -2.17
CDH9Q9ULB4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
CDH9Q9ULB4 Y_RNA.159-201ENST00000363674 87 ntBASIC1.47□□□□□ -2.17
CDH9Q9ULB4 SNORA7.1-201ENST00000363750 139 ntBASIC1.47□□□□□ -2.17
CDH9Q9ULB4 SNORD31B-201ENST00000364977 69 ntBASIC1.47□□□□□ -2.17
CDH9Q9ULB4 RN7SKP51-201ENST00000410781 304 ntBASIC1.47□□□□□ -2.17
CDH9Q9ULB4 RN7SKP142-201ENST00000411236 328 ntBASIC1.47□□□□□ -2.17
CDH9Q9ULB4 AP000275.1-201ENST00000411943 390 ntBASIC1.47□□□□□ -2.17
CDH9Q9ULB4 RPL23AP36-201ENST00000413895 458 ntBASIC1.47□□□□□ -2.17
CDH9Q9ULB4 AC090960.1-201ENST00000421072 306 ntBASIC1.47□□□□□ -2.17
CDH9Q9ULB4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.47□□□□□ -2.17
CDH9Q9ULB4 Z82205.1-201ENST00000428456 297 ntBASIC1.47□□□□□ -2.17
CDH9Q9ULB4 AC098826.2-201ENST00000452011 651 ntBASIC1.47□□□□□ -2.17
CDH9Q9ULB4 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.47□□□□□ -2.17
CDH9Q9ULB4 AC010486.3-201ENST00000511602 785 ntBASIC1.47□□□□□ -2.17
CDH9Q9ULB4 AC108729.3-201ENST00000513484 108 ntBASIC1.47□□□□□ -2.17
CDH9Q9ULB4 MIR4528-201ENST00000577763 90 ntBASIC1.47□□□□□ -2.17
CDH9Q9ULB4 MIR5583-1-201ENST00000580941 59 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms