Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.49□□□□□ -2.01
SIX4Q9UIU6 RPL17P19-201ENST00000489069 552 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.49□□□□□ -2.01
SIX4Q9UIU6 AC008413.1-201ENST00000511864 177 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 SNORA31.6-201ENST00000516241 130 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 RNU5B-3P-201ENST00000516601 115 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 RNU6-264P-201ENST00000517134 104 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 RN7SKP295-201ENST00000517264 153 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 AC004486.1-201ENST00000546846 233 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 AC091544.4-201ENST00000555268 342 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 SUB1P3-201ENST00000564581 315 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 SNORD53-201ENST00000579969 78 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 MIR3670-2-201ENST00000582974 65 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 MIR3670-1-201ENST00000584160 65 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 MIR3670-3-201ENST00000584855 65 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 RPS15AP11-201ENST00000594193 385 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.49□□□□□ -2.01
SIX4Q9UIU6 MIR3670-4-201ENST00000612260 65 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 AC007485.1-201ENST00000616755 206 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 AL590808.1-201ENST00000618696 141 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 UCA1.1-201ENST00000620952 75 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.48□□□□□ -2.01
SIX4Q9UIU6 MIR6073-201ENST00000352083 89 ntBASIC2.48□□□□□ -2.01
SIX4Q9UIU6 Y_RNA.252-201ENST00000364556 101 ntBASIC2.48□□□□□ -2.01
SIX4Q9UIU6 SNORA3.2-201ENST00000408221 125 ntBASIC2.48□□□□□ -2.01
SIX4Q9UIU6 AC008267.5-201ENST00000424928 265 ntBASIC2.48□□□□□ -2.01
SIX4Q9UIU6 MTCO3P29-201ENST00000432119 779 ntBASIC2.48□□□□□ -2.01
SIX4Q9UIU6 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.48□□□□□ -2.01
SIX4Q9UIU6 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.48□□□□□ -2.01
SIX4Q9UIU6 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.48□□□□□ -2.01
SIX4Q9UIU6 SCARNA17.1-201ENST00000516211 143 ntBASIC2.48□□□□□ -2.01
SIX4Q9UIU6 SCARNA17.2-201ENST00000516334 143 ntBASIC2.48□□□□□ -2.01
SIX4Q9UIU6 RNA5SP24-201ENST00000516478 95 ntBASIC2.48□□□□□ -2.01
SIX4Q9UIU6 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.48□□□□□ -2.01
SIX4Q9UIU6 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.48□□□□□ -2.01
SIX4Q9UIU6 HSPE1P4-201ENST00000550617 308 ntBASIC2.48□□□□□ -2.01
SIX4Q9UIU6 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.48□□□□□ -2.01
SIX4Q9UIU6 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.48□□□□□ -2.01
SIX4Q9UIU6 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.48□□□□□ -2.01
SIX4Q9UIU6 AC103810.1-201ENST00000579873 453 ntBASIC2.48□□□□□ -2.01
SIX4Q9UIU6 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.48□□□□□ -2.01
SIX4Q9UIU6 SCARNA17.4-201ENST00000614296 143 ntBASIC2.48□□□□□ -2.01
SIX4Q9UIU6 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SIX4Q9UIU6 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
SIX4Q9UIU6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SIX4Q9UIU6 Y_RNA.28-201ENST00000362554 111 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 RNU6-1141P-201ENST00000364520 107 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 U3.13-201ENST00000364804 214 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 SNORA33.2-201ENST00000365413 134 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 RNU6-968P-201ENST00000384076 107 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 SNORA36A-201ENST00000384221 132 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 RNY1P14-201ENST00000384426 108 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 Y_RNA.504-201ENST00000384481 104 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 RNU6-1222P-201ENST00000384615 107 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 RNA5SP390-201ENST00000410191 113 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 MCFD2P1-201ENST00000417812 300 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 AL358453.1-201ENST00000422522 250 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 Z82188.1-201ENST00000436709 154 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.47□□□□□ -2.01
SIX4Q9UIU6 MTND4P19-201ENST00000446659 478 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 RPL31P41-201ENST00000477967 372 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 RPL30P1-201ENST00000488676 339 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.47□□□□□ -2.01
SIX4Q9UIU6 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.47□□□□□ -2.01
SIX4Q9UIU6 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.47□□□□□ -2.01
SIX4Q9UIU6 MIR4446-201ENST00000578505 67 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 MIR5701-3-201ENST00000578890 82 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 MIR5701-1-201ENST00000585138 82 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 AC016925.2-201ENST00000605108 242 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 MIR1244-1-201ENST00000612829 85 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 MIR5701-2-201ENST00000615634 82 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 AC091925.1-201ENST00000623204 462 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 MIR1244-3-201ENST00000635744 85 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 FO624990.1-201ENST00000636373 85 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 MIR1244-2-201ENST00000636449 85 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 MIR1244-4-202ENST00000636813 85 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 MAPK10-266ENST00000641066 6555 ntBASIC2.47□□□□□ -2.01
SIX4Q9UIU6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
SIX4Q9UIU6 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.46□□□□□ -2.01
SIX4Q9UIU6 AC233981.2-201ENST00000611524 1614 ntBASIC2.46□□□□□ -2.02
SIX4Q9UIU6 MTND4P1-201ENST00000457501 1466 ntBASIC2.46□□□□□ -2.02
SIX4Q9UIU6 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SIX4Q9UIU6 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.46□□□□□ -2.02
SIX4Q9UIU6 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.46□□□□□ -2.02
SIX4Q9UIU6 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SIX4Q9UIU6 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SIX4Q9UIU6 Y_RNA.40-201ENST00000362645 93 ntBASIC2.46□□□□□ -2.02
SIX4Q9UIU6 RNU6-1285P-201ENST00000363480 105 ntBASIC2.46□□□□□ -2.02
SIX4Q9UIU6 Y_RNA.202-201ENST00000364083 110 ntBASIC2.46□□□□□ -2.02
SIX4Q9UIU6 RNU6-1286P-201ENST00000383871 107 ntBASIC2.46□□□□□ -2.02
SIX4Q9UIU6 Y_RNA.428-201ENST00000384078 102 ntBASIC2.46□□□□□ -2.02
SIX4Q9UIU6 RNA5SP494-201ENST00000410653 129 ntBASIC2.46□□□□□ -2.02
SIX4Q9UIU6 AC138623.1-201ENST00000418060 216 ntBASIC2.46□□□□□ -2.02
SIX4Q9UIU6 AL160004.2-201ENST00000432935 350 ntBASIC2.46□□□□□ -2.02
SIX4Q9UIU6 OSTCP8-201ENST00000445117 448 ntBASIC2.46□□□□□ -2.02
SIX4Q9UIU6 AL513124.1-201ENST00000450410 614 ntBASIC2.46□□□□□ -2.02
SIX4Q9UIU6 AL441985.1-201ENST00000457727 251 ntBASIC2.46□□□□□ -2.02
SIX4Q9UIU6 AF186996.7-201ENST00000492781 209 ntBASIC2.46□□□□□ -2.02
SIX4Q9UIU6 SNORA25.11-201ENST00000515935 105 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms