Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 MIR4738-201ENST00000579134 87 ntBASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 AL606490.9-201ENST00000603331 271 ntBASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VTI1BQ9UEU0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
VTI1BQ9UEU0 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.69□□□□□ -1.82
VTI1BQ9UEU0 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.69□□□□□ -1.82
VTI1BQ9UEU0 RNY1-201ENST00000364228 113 ntBASIC3.69□□□□□ -1.82
VTI1BQ9UEU0 RNU6-283P-201ENST00000364788 107 ntBASIC3.69□□□□□ -1.82
VTI1BQ9UEU0 Y_RNA.418-201ENST00000384029 102 ntBASIC3.69□□□□□ -1.82
VTI1BQ9UEU0 MIR218-1-201ENST00000384999 110 ntBASIC3.69□□□□□ -1.82
VTI1BQ9UEU0 SNORA57.1-201ENST00000391227 145 ntBASIC3.69□□□□□ -1.82
VTI1BQ9UEU0 RNU2-54P-201ENST00000410299 190 ntBASIC3.69□□□□□ -1.82
VTI1BQ9UEU0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.69□□□□□ -1.82
VTI1BQ9UEU0 AC006989.1-201ENST00000427212 131 ntBASIC3.69□□□□□ -1.82
VTI1BQ9UEU0 MRPS10P1-201ENST00000448483 130 ntBASIC3.69□□□□□ -1.82
VTI1BQ9UEU0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.69□□□□□ -1.82
VTI1BQ9UEU0 RNU6-586P-201ENST00000517265 104 ntBASIC3.69□□□□□ -1.82
VTI1BQ9UEU0 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.69□□□□□ -1.82
VTI1BQ9UEU0 VN1R85P-201ENST00000601587 426 ntBASIC3.69□□□□□ -1.82
VTI1BQ9UEU0 MIR6875-201ENST00000617506 72 ntBASIC3.69□□□□□ -1.82
VTI1BQ9UEU0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
VTI1BQ9UEU0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
VTI1BQ9UEU0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.69□□□□□ -1.82
VTI1BQ9UEU0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.69□□□□□ -1.82
VTI1BQ9UEU0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.68□□□□□ -1.82
VTI1BQ9UEU0 Y_RNA.65-201ENST00000362846 100 ntBASIC3.68□□□□□ -1.82
VTI1BQ9UEU0 RNU6-944P-201ENST00000364023 107 ntBASIC3.68□□□□□ -1.82
VTI1BQ9UEU0 RNU6-200P-201ENST00000364743 107 ntBASIC3.68□□□□□ -1.82
VTI1BQ9UEU0 RNA5SP97-201ENST00000365006 84 ntBASIC3.68□□□□□ -1.82
VTI1BQ9UEU0 MIR1193-201ENST00000408109 78 ntBASIC3.68□□□□□ -1.82
VTI1BQ9UEU0 MIR1294-201ENST00000408503 142 ntBASIC3.68□□□□□ -1.82
VTI1BQ9UEU0 TOMM22P2-201ENST00000430735 237 ntBASIC3.68□□□□□ -1.82
VTI1BQ9UEU0 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.68□□□□□ -1.82
VTI1BQ9UEU0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.68□□□□□ -1.82
VTI1BQ9UEU0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.68□□□□□ -1.82
VTI1BQ9UEU0 RAC1P2-201ENST00000511164 579 ntBASIC3.68□□□□□ -1.82
VTI1BQ9UEU0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.68□□□□□ -1.82
VTI1BQ9UEU0 RNA5SP208-201ENST00000516156 78 ntBASIC3.68□□□□□ -1.82
VTI1BQ9UEU0 RNU6-155P-201ENST00000516347 100 ntBASIC3.68□□□□□ -1.82
VTI1BQ9UEU0 RNU5F-4P-201ENST00000516581 114 ntBASIC3.68□□□□□ -1.82
VTI1BQ9UEU0 RNU6-1098P-201ENST00000516772 96 ntBASIC3.68□□□□□ -1.82
VTI1BQ9UEU0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.68□□□□□ -1.82
VTI1BQ9UEU0 AL133393.1-201ENST00000603277 287 ntBASIC3.68□□□□□ -1.82
VTI1BQ9UEU0 AC069294.1-201ENST00000608397 350 ntBASIC3.68□□□□□ -1.82
VTI1BQ9UEU0 AC092628.2-201ENST00000622492 339 ntBASIC3.68□□□□□ -1.82
VTI1BQ9UEU0 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.68□□□□□ -1.82
VTI1BQ9UEU0 MAPK10-362ENST00000641864 4484 ntBASIC3.68□□□□□ -1.82
VTI1BQ9UEU0 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
VTI1BQ9UEU0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
VTI1BQ9UEU0 AC092593.1-201ENST00000515413 1815 ntBASIC3.67□□□□□ -1.82
VTI1BQ9UEU0 PWAR6-201ENST00000552334 4618 ntBASIC3.67□□□□□ -1.82
VTI1BQ9UEU0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.67□□□□□ -1.82
VTI1BQ9UEU0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VTI1BQ9UEU0 RNA5SP479-201ENST00000364858 117 ntBASIC3.67□□□□□ -1.82
VTI1BQ9UEU0 RNU2-14P-201ENST00000411053 191 ntBASIC3.67□□□□□ -1.82
VTI1BQ9UEU0 RNU6-1199P-201ENST00000411249 104 ntBASIC3.67□□□□□ -1.82
VTI1BQ9UEU0 AC009963.1-201ENST00000417265 157 ntBASIC3.67□□□□□ -1.82
VTI1BQ9UEU0 MTCO1P5-201ENST00000433573 344 ntBASIC3.67□□□□□ -1.82
VTI1BQ9UEU0 NDUFB4P10-201ENST00000452541 359 ntBASIC3.67□□□□□ -1.82
VTI1BQ9UEU0 AC091959.1-201ENST00000495857 238 ntBASIC3.67□□□□□ -1.82
VTI1BQ9UEU0 AC018630.3-201ENST00000542637 96 ntBASIC3.67□□□□□ -1.82
VTI1BQ9UEU0 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.67□□□□□ -1.82
VTI1BQ9UEU0 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.67□□□□□ -1.82
VTI1BQ9UEU0 AC080128.1-201ENST00000474389 1917 ntBASIC3.67□□□□□ -1.82
VTI1BQ9UEU0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
VTI1BQ9UEU0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VTI1BQ9UEU0 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VTI1BQ9UEU0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
VTI1BQ9UEU0 U3.8-201ENST00000363675 217 ntBASIC3.66□□□□□ -1.82
VTI1BQ9UEU0 Y_RNA.269-201ENST00000364685 89 ntBASIC3.66□□□□□ -1.82
VTI1BQ9UEU0 MIR586-201ENST00000385035 97 ntBASIC3.66□□□□□ -1.82
VTI1BQ9UEU0 RNA5SP424-201ENST00000390988 115 ntBASIC3.66□□□□□ -1.82
VTI1BQ9UEU0 MIR1289-1-201ENST00000408836 144 ntBASIC3.66□□□□□ -1.82
VTI1BQ9UEU0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.66□□□□□ -1.82
VTI1BQ9UEU0 RBMY2UP-201ENST00000453474 324 ntBASIC3.66□□□□□ -1.82
VTI1BQ9UEU0 AC080013.2-201ENST00000460866 323 ntBASIC3.66□□□□□ -1.82
VTI1BQ9UEU0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.66□□□□□ -1.82
VTI1BQ9UEU0 RNU6-138P-201ENST00000515952 107 ntBASIC3.66□□□□□ -1.82
VTI1BQ9UEU0 RNU2-12P-201ENST00000517216 168 ntBASIC3.66□□□□□ -1.82
VTI1BQ9UEU0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.66□□□□□ -1.82
VTI1BQ9UEU0 MIR4643-201ENST00000577473 78 ntBASIC3.66□□□□□ -1.82
VTI1BQ9UEU0 MIR4425-201ENST00000580572 84 ntBASIC3.66□□□□□ -1.82
VTI1BQ9UEU0 AC023043.3-201ENST00000593113 385 ntBASIC3.66□□□□□ -1.82
VTI1BQ9UEU0 AC006380.1-201ENST00000603598 186 ntBASIC3.66□□□□□ -1.82
VTI1BQ9UEU0 SNORA62.6-201ENST00000606322 83 ntBASIC3.66□□□□□ -1.82
VTI1BQ9UEU0 SNORA51-201ENST00000606420 132 ntBASIC3.66□□□□□ -1.82
VTI1BQ9UEU0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.66□□□□□ -1.82
VTI1BQ9UEU0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VTI1BQ9UEU0 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VTI1BQ9UEU0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.65□□□□□ -1.82
VTI1BQ9UEU0 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.65□□□□□ -1.82
VTI1BQ9UEU0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.65□□□□□ -1.82
VTI1BQ9UEU0 AL049781.1-201ENST00000623195 3585 ntBASIC3.65□□□□□ -1.82
VTI1BQ9UEU0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
VTI1BQ9UEU0 TNPO1P3-201ENST00000436471 2662 ntBASIC3.65□□□□□ -1.82
VTI1BQ9UEU0 SNORD21-201ENST00000383953 95 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 634.6 ms