Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RNU6-273P-201ENST00000516937 96 ntBASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 RNU6-548P-201ENST00000517083 115 ntBASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 SNORA31.25-201ENST00000517242 134 ntBASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 POLR3GP2-201ENST00000588366 668 ntBASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
CLIP2Q9UDT6 RBBP8P1-201ENST00000449447 1844 ntBASIC2.21□□□□□ -2.05
CLIP2Q9UDT6 MIR369-201ENST00000362155 70 ntBASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 Y_RNA.162-201ENST00000363683 102 ntBASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 Y_RNA.373-201ENST00000365600 103 ntBASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 Y_RNA.576-201ENST00000384781 102 ntBASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 MIR454-201ENST00000390180 115 ntBASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 Y_RNA.579-201ENST00000390939 94 ntBASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 RNA5SP489-201ENST00000410986 109 ntBASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 AC005534.2-201ENST00000431047 433 ntBASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 RPS3AP52-201ENST00000435639 297 ntBASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 AC006026.2-201ENST00000457376 180 ntBASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 RNU7-180P-201ENST00000459240 63 ntBASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 SNORD60.2-201ENST00000516883 86 ntBASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 RNU2-19P-201ENST00000517288 84 ntBASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 MIR4287-201ENST00000579398 78 ntBASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 MIR5692A1-201ENST00000580523 69 ntBASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 BNIP3P25-201ENST00000596023 559 ntBASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 AL713866.2-201ENST00000603579 219 ntBASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 AP001836.1-201ENST00000604675 523 ntBASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 AL355297.2-201ENST00000604792 129 ntBASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 RMST_4.1-201ENST00000616886 107 ntBASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 AC011155.2-201ENST00000623202 216 ntBASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.21□□□□□ -2.06
CLIP2Q9UDT6 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 Y_RNA.301-201ENST00000364990 103 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 RNU4-66P-201ENST00000365199 138 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 SNORD115-7-201ENST00000365306 82 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 RNU6-622P-201ENST00000384272 103 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 MIR676-201ENST00000390702 67 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 SNORD37.1-201ENST00000390968 65 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 RNU6-373P-201ENST00000411247 98 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 AIMP1P2-201ENST00000425294 312 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 ERLEC1P1-201ENST00000433806 578 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 AL161788.1-201ENST00000441805 169 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 AC104058.1-201ENST00000448028 297 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 PPP1R2P5-201ENST00000457256 603 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 snoU109.2-201ENST00000459316 135 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 AC140059.1-201ENST00000489238 361 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 FAM206BP-201ENST00000510179 541 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 Y_RNA.691-201ENST00000516611 103 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 SNORA48.11-201ENST00000517015 89 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 FRG2DP-202ENST00000566967 323 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 AC093249.1-201ENST00000567049 203 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 AC078795.3-201ENST00000602913 472 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 AC012493.3-201ENST00000604494 112 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 Y_RNA.812-201ENST00000610788 101 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 uc_338.5-201ENST00000611839 155 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 Y_RNA.784-201ENST00000613803 101 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 Y_RNA.787-201ENST00000616522 101 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 Y_RNA.780-201ENST00000617336 101 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 Y_RNA.801-201ENST00000619005 101 ntBASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CLIP2Q9UDT6 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 Y_RNA.31-201ENST00000362574 102 ntBASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 Y_RNA.315-201ENST00000365117 102 ntBASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 RNU1-57P-201ENST00000384491 166 ntBASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 RNU6-692P-201ENST00000384496 107 ntBASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 RNU6-308P-201ENST00000390957 107 ntBASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 RNA5SP111-201ENST00000411386 101 ntBASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 AC009238.1-201ENST00000442165 424 ntBASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 AC009237.6-201ENST00000446969 424 ntBASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 MTND1P18-201ENST00000448191 573 ntBASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 SNORD19B-201ENST00000459623 84 ntBASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 AC107032.1-201ENST00000485945 480 ntBASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 AC005741.1-201ENST00000511094 432 ntBASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 RNU1-86P-201ENST00000516108 154 ntBASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 Y_RNA.687-201ENST00000516558 91 ntBASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 RNU1-107P-201ENST00000516617 154 ntBASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 RNU2-44P-201ENST00000516795 194 ntBASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 AP005639.2-201ENST00000527592 928 ntBASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 MIR4703-201ENST00000577728 79 ntBASIC2.19□□□□□ -2.06
CLIP2Q9UDT6 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 157.7 ms