Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CNTN3Q9P232 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CNTN3Q9P232 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.03□□□□□ -1.76
CNTN3Q9P232 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CNTN3Q9P232 AP001486.2-201ENST00000561652 5113 ntBASIC4.03□□□□□ -1.76
CNTN3Q9P232 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.03□□□□□ -1.76
CNTN3Q9P232 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.03□□□□□ -1.76
CNTN3Q9P232 RNU1-18P-201ENST00000363062 164 ntBASIC4.03□□□□□ -1.76
CNTN3Q9P232 SNORD50B-201ENST00000364995 70 ntBASIC4.03□□□□□ -1.76
CNTN3Q9P232 RNU4-17P-201ENST00000365598 141 ntBASIC4.03□□□□□ -1.76
CNTN3Q9P232 RNU6-198P-201ENST00000384258 104 ntBASIC4.03□□□□□ -1.76
CNTN3Q9P232 MIR200C-201ENST00000384980 68 ntBASIC4.03□□□□□ -1.76
CNTN3Q9P232 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.03□□□□□ -1.76
CNTN3Q9P232 U3.40-201ENST00000408706 208 ntBASIC4.03□□□□□ -1.76
CNTN3Q9P232 RNA5SP201-201ENST00000410316 124 ntBASIC4.03□□□□□ -1.76
CNTN3Q9P232 AC023141.4-201ENST00000412031 328 ntBASIC4.03□□□□□ -1.76
CNTN3Q9P232 AL714022.1-201ENST00000439897 151 ntBASIC4.03□□□□□ -1.76
CNTN3Q9P232 RNU7-23P-201ENST00000459465 62 ntBASIC4.03□□□□□ -1.76
CNTN3Q9P232 RPS27AP9-201ENST00000477681 438 ntBASIC4.03□□□□□ -1.76
CNTN3Q9P232 RNU6-436P-201ENST00000516171 114 ntBASIC4.03□□□□□ -1.76
CNTN3Q9P232 RNU6-711P-201ENST00000517255 106 ntBASIC4.03□□□□□ -1.76
CNTN3Q9P232 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.03□□□□□ -1.76
CNTN3Q9P232 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.03□□□□□ -1.76
CNTN3Q9P232 AC110741.2-201ENST00000605278 268 ntBASIC4.03□□□□□ -1.76
CNTN3Q9P232 TCL6_2.1-201ENST00000615162 119 ntBASIC4.03□□□□□ -1.76
CNTN3Q9P232 AC084757.4-201ENST00000616350 526 ntBASIC4.03□□□□□ -1.76
CNTN3Q9P232 AC091152.2-201ENST00000591628 2569 ntBASIC4.03□□□□□ -1.77
CNTN3Q9P232 SNORD114-19-201ENST00000363072 75 ntBASIC4.02□□□□□ -1.77
CNTN3Q9P232 RNA5SP51-201ENST00000364750 119 ntBASIC4.02□□□□□ -1.77
CNTN3Q9P232 Y_RNA.400-201ENST00000383963 111 ntBASIC4.02□□□□□ -1.77
CNTN3Q9P232 MIR449B-201ENST00000384995 97 ntBASIC4.02□□□□□ -1.77
CNTN3Q9P232 ATP5A1P2-201ENST00000412323 255 ntBASIC4.02□□□□□ -1.77
CNTN3Q9P232 Y_RNA.637-201ENST00000459424 114 ntBASIC4.02□□□□□ -1.77
CNTN3Q9P232 EIF4A1P12-201ENST00000551910 141 ntBASIC4.02□□□□□ -1.77
CNTN3Q9P232 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.02□□□□□ -1.77
CNTN3Q9P232 AC011471.1-201ENST00000585766 187 ntBASIC4.02□□□□□ -1.77
CNTN3Q9P232 AC012493.2-201ENST00000595083 291 ntBASIC4.02□□□□□ -1.77
CNTN3Q9P232 MIR92B-201ENST00000607575 96 ntBASIC4.02□□□□□ -1.77
CNTN3Q9P232 SNORD11B-201ENST00000607707 90 ntBASIC4.02□□□□□ -1.77
CNTN3Q9P232 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.02□□□□□ -1.77
CNTN3Q9P232 AC007496.3-201ENST00000624987 3443 ntBASIC4.02□□□□□ -1.77
CNTN3Q9P232 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CNTN3Q9P232 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CNTN3Q9P232 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.01□□□□□ -1.77
CNTN3Q9P232 RNU6-529P-201ENST00000363383 104 ntBASIC4.01□□□□□ -1.77
CNTN3Q9P232 RNU6-324P-201ENST00000363957 106 ntBASIC4.01□□□□□ -1.77
CNTN3Q9P232 RNU6-1130P-201ENST00000365434 107 ntBASIC4.01□□□□□ -1.77
CNTN3Q9P232 Y_RNA.497-201ENST00000384447 98 ntBASIC4.01□□□□□ -1.77
CNTN3Q9P232 MIR670-201ENST00000390142 98 ntBASIC4.01□□□□□ -1.77
CNTN3Q9P232 RNA5SP171-201ENST00000391071 115 ntBASIC4.01□□□□□ -1.77
CNTN3Q9P232 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.01□□□□□ -1.77
CNTN3Q9P232 RNU7-170P-201ENST00000459303 61 ntBASIC4.01□□□□□ -1.77
CNTN3Q9P232 TRBV12-2-201ENST00000489763 344 ntBASIC4.01□□□□□ -1.77
CNTN3Q9P232 RNU6-62P-201ENST00000516526 102 ntBASIC4.01□□□□□ -1.77
CNTN3Q9P232 RNU6-107P-201ENST00000516643 102 ntBASIC4.01□□□□□ -1.77
CNTN3Q9P232 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.01□□□□□ -1.77
CNTN3Q9P232 AC005562.2-201ENST00000618264 111 ntBASIC4.01□□□□□ -1.77
CNTN3Q9P232 MIR6075-201ENST00000620782 95 ntBASIC4.01□□□□□ -1.77
CNTN3Q9P232 AP000553.6-201ENST00000641242 118 ntBASIC4.01□□□□□ -1.77
CNTN3Q9P232 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CNTN3Q9P232 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.01□□□□□ -1.77
CNTN3Q9P232 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.01□□□□□ -1.77
CNTN3Q9P232 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4□□□□□ -1.77
CNTN3Q9P232 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CNTN3Q9P232 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4□□□□□ -1.77
CNTN3Q9P232 SNORA71.3-201ENST00000362582 128 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 U3.9-201ENST00000363823 204 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 RNU4-84P-201ENST00000364200 139 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 5S_rRNA.1-201ENST00000364415 116 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 Y_RNA.415-201ENST00000384012 112 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 Y_RNA.488-201ENST00000384403 102 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 RNU2-2P-201ENST00000410396 191 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4□□□□□ -1.77
CNTN3Q9P232 RPS20P10-201ENST00000451209 253 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 U3.44-201ENST00000458938 192 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4□□□□□ -1.77
CNTN3Q9P232 AC136628.3-201ENST00000521868 290 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4□□□□□ -1.77
CNTN3Q9P232 TGIF1P1-201ENST00000558095 802 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 RNU2-4P-201ENST00000606190 192 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 U2.15-201ENST00000611544 191 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 U2.16-201ENST00000613119 191 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 U2.12-201ENST00000613778 191 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 U2.9-201ENST00000615427 191 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 U2.11-201ENST00000616345 191 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 U2.2-201ENST00000616535 191 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 U2.3-201ENST00000617785 191 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 U2.19-201ENST00000618602 191 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 RNU2-1-201ENST00000618664 191 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 U2.6-201ENST00000619225 191 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 XIST_intron.1-201ENST00000619444 68 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 U2.5-201ENST00000619465 191 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 U2.10-201ENST00000620268 191 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 AC018692.3-201ENST00000623929 123 ntBASIC4□□□□□ -1.77
CNTN3Q9P232 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
CNTN3Q9P232 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4□□□□□ -1.77
CNTN3Q9P232 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4□□□□□ -1.77
CNTN3Q9P232 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.99□□□□□ -1.77
CNTN3Q9P232 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CNTN3Q9P232 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms