Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MTND4P27-201ENST00000450813 1354 ntBASIC2.94□□□□□ -1.94
COL20A1Q9P218 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.94□□□□□ -1.94
COL20A1Q9P218 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
COL20A1Q9P218 FAM35CP-201ENST00000554755 2470 ntBASIC2.93□□□□□ -1.94
COL20A1Q9P218 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.93□□□□□ -1.94
COL20A1Q9P218 SNORA63-201ENST00000363450 132 ntBASIC2.93□□□□□ -1.94
COL20A1Q9P218 RNU6-99P-201ENST00000364721 107 ntBASIC2.93□□□□□ -1.94
COL20A1Q9P218 MIR153-2-201ENST00000385225 87 ntBASIC2.93□□□□□ -1.94
COL20A1Q9P218 RNU6-1156P-201ENST00000410365 100 ntBASIC2.93□□□□□ -1.94
COL20A1Q9P218 RNU6-1328P-201ENST00000410938 106 ntBASIC2.93□□□□□ -1.94
COL20A1Q9P218 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.93□□□□□ -1.94
COL20A1Q9P218 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.93□□□□□ -1.94
COL20A1Q9P218 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.93□□□□□ -1.94
COL20A1Q9P218 AC073901.1-201ENST00000462471 408 ntBASIC2.93□□□□□ -1.94
COL20A1Q9P218 Y_RNA.661-201ENST00000516003 99 ntBASIC2.93□□□□□ -1.94
COL20A1Q9P218 RNU6-1198P-201ENST00000516904 67 ntBASIC2.93□□□□□ -1.94
COL20A1Q9P218 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.93□□□□□ -1.94
COL20A1Q9P218 AC020661.2-201ENST00000560114 134 ntBASIC2.93□□□□□ -1.94
COL20A1Q9P218 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.93□□□□□ -1.94
COL20A1Q9P218 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.93□□□□□ -1.94
COL20A1Q9P218 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.93□□□□□ -1.94
COL20A1Q9P218 AC099654.10-201ENST00000640395 161 ntBASIC2.93□□□□□ -1.94
COL20A1Q9P218 AC080128.1-201ENST00000474389 1917 ntBASIC2.93□□□□□ -1.94
COL20A1Q9P218 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL20A1Q9P218 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL20A1Q9P218 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
COL20A1Q9P218 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
COL20A1Q9P218 SNORA36A-201ENST00000384221 132 ntBASIC2.92□□□□□ -1.94
COL20A1Q9P218 RNU6-474P-201ENST00000384243 107 ntBASIC2.92□□□□□ -1.94
COL20A1Q9P218 MIR218-1-201ENST00000384999 110 ntBASIC2.92□□□□□ -1.94
COL20A1Q9P218 MIR29B2-201ENST00000385055 81 ntBASIC2.92□□□□□ -1.94
COL20A1Q9P218 RNA5SP344-201ENST00000411081 104 ntBASIC2.92□□□□□ -1.94
COL20A1Q9P218 RPS26P42-201ENST00000413485 326 ntBASIC2.92□□□□□ -1.94
COL20A1Q9P218 AC018865.2-201ENST00000423631 129 ntBASIC2.92□□□□□ -1.94
COL20A1Q9P218 RPL30P4-201ENST00000429309 333 ntBASIC2.92□□□□□ -1.94
COL20A1Q9P218 AC092423.1-201ENST00000430165 186 ntBASIC2.92□□□□□ -1.94
COL20A1Q9P218 RPS15AP7-201ENST00000439294 405 ntBASIC2.92□□□□□ -1.94
COL20A1Q9P218 AL137792.2-201ENST00000443484 235 ntBASIC2.92□□□□□ -1.94
COL20A1Q9P218 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.92□□□□□ -1.94
COL20A1Q9P218 AL035666.1-201ENST00000446195 348 ntBASIC2.92□□□□□ -1.94
COL20A1Q9P218 OR2AQ1P-201ENST00000451972 200 ntBASIC2.92□□□□□ -1.94
COL20A1Q9P218 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.92□□□□□ -1.94
COL20A1Q9P218 AC090096.1-201ENST00000489168 390 ntBASIC2.92□□□□□ -1.94
COL20A1Q9P218 AF186996.7-201ENST00000492781 209 ntBASIC2.92□□□□□ -1.94
COL20A1Q9P218 AC091144.1-201ENST00000519573 138 ntBASIC2.92□□□□□ -1.94
COL20A1Q9P218 AC144568.1-201ENST00000520139 137 ntBASIC2.92□□□□□ -1.94
COL20A1Q9P218 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.92□□□□□ -1.94
COL20A1Q9P218 AC105245.1-201ENST00000581934 244 ntBASIC2.92□□□□□ -1.94
COL20A1Q9P218 SNRPGP17-201ENST00000603780 214 ntBASIC2.92□□□□□ -1.94
COL20A1Q9P218 AL138963.2-201ENST00000605137 226 ntBASIC2.92□□□□□ -1.94
COL20A1Q9P218 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.92□□□□□ -1.94
COL20A1Q9P218 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
COL20A1Q9P218 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.92□□□□□ -1.94
COL20A1Q9P218 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.91□□□□□ -1.94
COL20A1Q9P218 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.91□□□□□ -1.94
COL20A1Q9P218 RNA5SP289-201ENST00000362332 137 ntBASIC2.91□□□□□ -1.94
COL20A1Q9P218 Y_RNA.5-201ENST00000362334 102 ntBASIC2.91□□□□□ -1.94
COL20A1Q9P218 Y_RNA.405-201ENST00000383979 100 ntBASIC2.91□□□□□ -1.94
COL20A1Q9P218 Y_RNA.451-201ENST00000384200 100 ntBASIC2.91□□□□□ -1.94
COL20A1Q9P218 Y_RNA.524-201ENST00000384564 100 ntBASIC2.91□□□□□ -1.94
COL20A1Q9P218 Y_RNA.561-201ENST00000384694 100 ntBASIC2.91□□□□□ -1.94
COL20A1Q9P218 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.91□□□□□ -1.94
COL20A1Q9P218 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.91□□□□□ -1.94
COL20A1Q9P218 AC140059.1-201ENST00000489238 361 ntBASIC2.91□□□□□ -1.94
COL20A1Q9P218 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.91□□□□□ -1.94
COL20A1Q9P218 AC023141.11-201ENST00000508864 202 ntBASIC2.91□□□□□ -1.94
COL20A1Q9P218 RNU6-120P-201ENST00000516077 103 ntBASIC2.91□□□□□ -1.94
COL20A1Q9P218 RNU6-988P-201ENST00000519081 107 ntBASIC2.91□□□□□ -1.94
COL20A1Q9P218 AL078605.1-201ENST00000603529 500 ntBASIC2.91□□□□□ -1.94
COL20A1Q9P218 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.91□□□□□ -1.94
COL20A1Q9P218 AC013412.1-201ENST00000610687 192 ntBASIC2.91□□□□□ -1.94
COL20A1Q9P218 AC107871.2-201ENST00000612894 502 ntBASIC2.91□□□□□ -1.94
COL20A1Q9P218 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.91□□□□□ -1.94
COL20A1Q9P218 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.91□□□□□ -1.94
COL20A1Q9P218 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL20A1Q9P218 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL20A1Q9P218 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
COL20A1Q9P218 RNU6-137P-201ENST00000363680 108 ntBASIC2.9□□□□□ -1.95
COL20A1Q9P218 Y_RNA.314-201ENST00000365114 102 ntBASIC2.9□□□□□ -1.95
COL20A1Q9P218 RNU1-115P-201ENST00000365329 160 ntBASIC2.9□□□□□ -1.95
COL20A1Q9P218 MIR32-201ENST00000384965 70 ntBASIC2.9□□□□□ -1.95
COL20A1Q9P218 MIR27B-201ENST00000385129 97 ntBASIC2.9□□□□□ -1.95
COL20A1Q9P218 MIR190B-201ENST00000401119 79 ntBASIC2.9□□□□□ -1.95
COL20A1Q9P218 Z82188.1-201ENST00000436709 154 ntBASIC2.9□□□□□ -1.95
COL20A1Q9P218 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.9□□□□□ -1.95
COL20A1Q9P218 Y_RNA.711-201ENST00000516993 102 ntBASIC2.9□□□□□ -1.95
COL20A1Q9P218 AC007536.1-201ENST00000533382 349 ntBASIC2.9□□□□□ -1.95
COL20A1Q9P218 AC091544.4-201ENST00000555268 342 ntBASIC2.9□□□□□ -1.95
COL20A1Q9P218 MIR3171-201ENST00000584270 74 ntBASIC2.9□□□□□ -1.95
COL20A1Q9P218 AC010928.2-201ENST00000588017 287 ntBASIC2.9□□□□□ -1.95
COL20A1Q9P218 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.9□□□□□ -1.95
COL20A1Q9P218 AC078899.3-201ENST00000599065 212 ntBASIC2.9□□□□□ -1.95
COL20A1Q9P218 Y_RNA.812-201ENST00000610788 101 ntBASIC2.9□□□□□ -1.95
COL20A1Q9P218 Y_RNA.784-201ENST00000613803 101 ntBASIC2.9□□□□□ -1.95
COL20A1Q9P218 AC005520.5-201ENST00000613926 164 ntBASIC2.9□□□□□ -1.95
COL20A1Q9P218 Y_RNA.787-201ENST00000616522 101 ntBASIC2.9□□□□□ -1.95
COL20A1Q9P218 Y_RNA.780-201ENST00000617336 101 ntBASIC2.9□□□□□ -1.95
COL20A1Q9P218 Y_RNA.801-201ENST00000619005 101 ntBASIC2.9□□□□□ -1.95
COL20A1Q9P218 MIR5739-201ENST00000619803 80 ntBASIC2.9□□□□□ -1.95
COL20A1Q9P218 AC069528.2-201ENST00000624849 1991 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 412.1 ms