Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 RNU6-877P-201ENST00000383868 107 ntBASIC2.01□□□□□ -2.09
CHCHD3Q9NX63 SNORA67.4-201ENST00000384688 142 ntBASIC2.01□□□□□ -2.09
CHCHD3Q9NX63 RNA5SP212-201ENST00000391223 107 ntBASIC2.01□□□□□ -2.09
CHCHD3Q9NX63 RNU2-52P-201ENST00000410680 190 ntBASIC2.01□□□□□ -2.09
CHCHD3Q9NX63 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.01□□□□□ -2.09
CHCHD3Q9NX63 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.01□□□□□ -2.09
CHCHD3Q9NX63 HMGN2P18-201ENST00000450680 270 ntBASIC2.01□□□□□ -2.09
CHCHD3Q9NX63 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.01□□□□□ -2.09
CHCHD3Q9NX63 AC091435.1-201ENST00000505442 584 ntBASIC2.01□□□□□ -2.09
CHCHD3Q9NX63 FAM206BP-201ENST00000510179 541 ntBASIC2.01□□□□□ -2.09
CHCHD3Q9NX63 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.01□□□□□ -2.09
CHCHD3Q9NX63 MIR6132-201ENST00000622083 109 ntBASIC2.01□□□□□ -2.09
CHCHD3Q9NX63 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.01□□□□□ -2.09
CHCHD3Q9NX63 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CHCHD3Q9NX63 CBX3P1-201ENST00000325243 554 ntBASIC2□□□□□ -2.09
CHCHD3Q9NX63 Y_RNA.6-201ENST00000362350 114 ntBASIC2□□□□□ -2.09
CHCHD3Q9NX63 RNA5SP276-201ENST00000362580 94 ntBASIC2□□□□□ -2.09
CHCHD3Q9NX63 RNU6-562P-201ENST00000362731 107 ntBASIC2□□□□□ -2.09
CHCHD3Q9NX63 SNORD31B-201ENST00000364977 69 ntBASIC2□□□□□ -2.09
CHCHD3Q9NX63 RNU6-438P-201ENST00000365561 103 ntBASIC2□□□□□ -2.09
CHCHD3Q9NX63 Y_RNA.373-201ENST00000365600 103 ntBASIC2□□□□□ -2.09
CHCHD3Q9NX63 RNU6-968P-201ENST00000384076 107 ntBASIC2□□□□□ -2.09
CHCHD3Q9NX63 RNU6-378P-201ENST00000384324 107 ntBASIC2□□□□□ -2.09
CHCHD3Q9NX63 SNORA8-201ENST00000384574 139 ntBASIC2□□□□□ -2.09
CHCHD3Q9NX63 RNU11-3P-201ENST00000391111 133 ntBASIC2□□□□□ -2.09
CHCHD3Q9NX63 VN1R36P-201ENST00000414936 291 ntBASIC2□□□□□ -2.09
CHCHD3Q9NX63 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2□□□□□ -2.09
CHCHD3Q9NX63 AC244636.1-201ENST00000421152 228 ntBASIC2□□□□□ -2.09
CHCHD3Q9NX63 BX510359.4-201ENST00000423750 193 ntBASIC2□□□□□ -2.09
CHCHD3Q9NX63 AC096920.1-201ENST00000423991 241 ntBASIC2□□□□□ -2.09
CHCHD3Q9NX63 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2□□□□□ -2.09
CHCHD3Q9NX63 RPL39P5-202ENST00000512505 151 ntBASIC2□□□□□ -2.09
CHCHD3Q9NX63 RN7SKP132-201ENST00000516001 208 ntBASIC2□□□□□ -2.09
CHCHD3Q9NX63 RNU5F-4P-201ENST00000516581 114 ntBASIC2□□□□□ -2.09
CHCHD3Q9NX63 AC090517.1-201ENST00000569307 266 ntBASIC2□□□□□ -2.09
CHCHD3Q9NX63 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2□□□□□ -2.09
CHCHD3Q9NX63 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2□□□□□ -2.09
CHCHD3Q9NX63 AC103810.6-201ENST00000606708 136 ntBASIC2□□□□□ -2.09
CHCHD3Q9NX63 AC104458.1-201ENST00000608243 463 ntBASIC2□□□□□ -2.09
CHCHD3Q9NX63 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
CHCHD3Q9NX63 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2□□□□□ -2.09
CHCHD3Q9NX63 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2□□□□□ -2.09
CHCHD3Q9NX63 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 RNU5B-2P-201ENST00000363036 113 ntBASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 RNU6-23P-201ENST00000363283 107 ntBASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 Y_RNA.212-201ENST00000364177 102 ntBASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 RNU4-42P-201ENST00000364738 142 ntBASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 Y_RNA.414-201ENST00000384011 101 ntBASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 SNORA32.2-201ENST00000384049 122 ntBASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 SNORA29-201ENST00000384183 140 ntBASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 RNU6-1215P-201ENST00000384441 102 ntBASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 MIR518C-201ENST00000384822 101 ntBASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 RPS20P15-201ENST00000412792 311 ntBASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 HMGN2P3-201ENST00000433603 273 ntBASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 USP9YP28-201ENST00000435142 589 ntBASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 HMGN2P5-201ENST00000436882 273 ntBASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 AL513124.1-201ENST00000450410 614 ntBASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 RNU7-66P-201ENST00000459469 62 ntBASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 RPS23P5-201ENST00000495419 428 ntBASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 MIR6817-201ENST00000615588 66 ntBASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.99□□□□□ -2.09
CHCHD3Q9NX63 LINC02555-201ENST00000563933 1951 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 Y_RNA.89-201ENST00000363031 102 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 Y_RNA.123-201ENST00000363338 102 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 Y_RNA.135-201ENST00000363439 95 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 RNU6-1090P-201ENST00000364065 94 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 SNORA36A-201ENST00000384221 132 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 RNU6-1026P-201ENST00000384465 108 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 MIR521-1-201ENST00000384902 87 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 SNORA48.3-201ENST00000391081 134 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 MIR300-201ENST00000401138 83 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 MIR320B2-201ENST00000408479 138 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 RNA5SP494-201ENST00000410653 129 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 Y_RNA.615-201ENST00000410769 117 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 AC007395.1-201ENST00000451333 677 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 AC016925.1-201ENST00000458303 298 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 SNORA59A-201ENST00000459326 152 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 AC234781.5-201ENST00000508429 271 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 RNU6-256P-201ENST00000516747 97 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 DEFB122-202ENST00000569013 197 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 AC005786.1-201ENST00000588553 154 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 AL773524.1-201ENST00000614065 229 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 AL138726.1-201ENST00000614873 333 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 AC009831.4-201ENST00000620744 325 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 MIR6852-201ENST00000621699 66 ntBASIC1.98□□□□□ -2.09
CHCHD3Q9NX63 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms