Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AC069528.2-201ENST00000624849 1991 ntBASIC2.91□□□□□ -1.94
RLIMQ9NVW2 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
RLIMQ9NVW2 AL049781.1-201ENST00000623195 3585 ntBASIC2.9□□□□□ -1.94
RLIMQ9NVW2 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.9□□□□□ -1.94
RLIMQ9NVW2 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.9□□□□□ -1.95
RLIMQ9NVW2 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.9□□□□□ -1.95
RLIMQ9NVW2 U3.9-201ENST00000363823 204 ntBASIC2.9□□□□□ -1.95
RLIMQ9NVW2 Y_RNA.222-201ENST00000364264 102 ntBASIC2.9□□□□□ -1.95
RLIMQ9NVW2 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.9□□□□□ -1.95
RLIMQ9NVW2 RNU6-281P-201ENST00000384212 103 ntBASIC2.9□□□□□ -1.95
RLIMQ9NVW2 MIR449B-201ENST00000384995 97 ntBASIC2.9□□□□□ -1.95
RLIMQ9NVW2 RNU6-1328P-201ENST00000410938 106 ntBASIC2.9□□□□□ -1.95
RLIMQ9NVW2 AC010095.1-201ENST00000443543 144 ntBASIC2.9□□□□□ -1.95
RLIMQ9NVW2 Z75741.1-201ENST00000446793 314 ntBASIC2.9□□□□□ -1.95
RLIMQ9NVW2 AC067942.3-201ENST00000512025 362 ntBASIC2.9□□□□□ -1.95
RLIMQ9NVW2 MIR4429-201ENST00000580105 73 ntBASIC2.9□□□□□ -1.95
RLIMQ9NVW2 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.9□□□□□ -1.95
RLIMQ9NVW2 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.9□□□□□ -1.95
RLIMQ9NVW2 AC078899.3-201ENST00000599065 212 ntBASIC2.9□□□□□ -1.95
RLIMQ9NVW2 Y_RNA.772-201ENST00000606692 102 ntBASIC2.9□□□□□ -1.95
RLIMQ9NVW2 PCGEM1.1-201ENST00000613431 131 ntBASIC2.9□□□□□ -1.95
RLIMQ9NVW2 U4.1-201ENST00000620349 87 ntBASIC2.9□□□□□ -1.95
RLIMQ9NVW2 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RLIMQ9NVW2 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
RLIMQ9NVW2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.9□□□□□ -1.95
RLIMQ9NVW2 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.9□□□□□ -1.95
RLIMQ9NVW2 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
RLIMQ9NVW2 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RLIMQ9NVW2 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
RLIMQ9NVW2 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
RLIMQ9NVW2 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RLIMQ9NVW2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.89□□□□□ -1.95
RLIMQ9NVW2 AC008264.2-201ENST00000610193 3731 ntBASIC2.89□□□□□ -1.95
RLIMQ9NVW2 AC026241.1-201ENST00000517873 2142 ntBASIC2.89□□□□□ -1.95
RLIMQ9NVW2 AC099654.7-201ENST00000635788 2127 ntBASIC2.89□□□□□ -1.95
RLIMQ9NVW2 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
RLIMQ9NVW2 Y_RNA.143-201ENST00000363520 106 ntBASIC2.89□□□□□ -1.95
RLIMQ9NVW2 RNU6-727P-201ENST00000363592 107 ntBASIC2.89□□□□□ -1.95
RLIMQ9NVW2 RNU6-137P-201ENST00000363680 108 ntBASIC2.89□□□□□ -1.95
RLIMQ9NVW2 SNORD115-8-201ENST00000363856 82 ntBASIC2.89□□□□□ -1.95
RLIMQ9NVW2 RNU6-770P-201ENST00000363929 105 ntBASIC2.89□□□□□ -1.95
RLIMQ9NVW2 SNORD115-38-201ENST00000365037 82 ntBASIC2.89□□□□□ -1.95
RLIMQ9NVW2 MIR23A-201ENST00000385245 73 ntBASIC2.89□□□□□ -1.95
RLIMQ9NVW2 RNA5SP213-201ENST00000391031 106 ntBASIC2.89□□□□□ -1.95
RLIMQ9NVW2 MIR320B2-201ENST00000408479 138 ntBASIC2.89□□□□□ -1.95
RLIMQ9NVW2 RNU2-20P-201ENST00000410425 191 ntBASIC2.89□□□□□ -1.95
RLIMQ9NVW2 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.89□□□□□ -1.95
RLIMQ9NVW2 AC027124.2-201ENST00000428249 105 ntBASIC2.89□□□□□ -1.95
RLIMQ9NVW2 RPL30P4-201ENST00000429309 333 ntBASIC2.89□□□□□ -1.95
RLIMQ9NVW2 AC112220.1-201ENST00000434628 355 ntBASIC2.89□□□□□ -1.95
RLIMQ9NVW2 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.89□□□□□ -1.95
RLIMQ9NVW2 FCF1P4-201ENST00000448326 183 ntBASIC2.89□□□□□ -1.95
RLIMQ9NVW2 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.89□□□□□ -1.95
RLIMQ9NVW2 RNU6-1012P-201ENST00000516606 109 ntBASIC2.89□□□□□ -1.95
RLIMQ9NVW2 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.89□□□□□ -1.95
RLIMQ9NVW2 AC027176.1-201ENST00000560204 514 ntBASIC2.89□□□□□ -1.95
RLIMQ9NVW2 AC010999.1-201ENST00000611856 324 ntBASIC2.89□□□□□ -1.95
RLIMQ9NVW2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RLIMQ9NVW2 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RLIMQ9NVW2 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RLIMQ9NVW2 RNU6-702P-201ENST00000364982 107 ntBASIC2.88□□□□□ -1.95
RLIMQ9NVW2 Y_RNA.452-201ENST00000384202 108 ntBASIC2.88□□□□□ -1.95
RLIMQ9NVW2 AL512633.1-201ENST00000399931 655 ntBASIC2.88□□□□□ -1.95
RLIMQ9NVW2 AL079342.1-201ENST00000401460 267 ntBASIC2.88□□□□□ -1.95
RLIMQ9NVW2 RNA5SP201-201ENST00000410316 124 ntBASIC2.88□□□□□ -1.95
RLIMQ9NVW2 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.88□□□□□ -1.95
RLIMQ9NVW2 AL731563.1-201ENST00000442202 214 ntBASIC2.88□□□□□ -1.95
RLIMQ9NVW2 PCNPP5-201ENST00000452246 481 ntBASIC2.88□□□□□ -1.95
RLIMQ9NVW2 EIF4A1P12-201ENST00000551910 141 ntBASIC2.88□□□□□ -1.95
RLIMQ9NVW2 SNRPGP20-201ENST00000604477 205 ntBASIC2.88□□□□□ -1.95
RLIMQ9NVW2 AC005520.5-201ENST00000613926 164 ntBASIC2.88□□□□□ -1.95
RLIMQ9NVW2 MIR7975-201ENST00000619350 68 ntBASIC2.88□□□□□ -1.95
RLIMQ9NVW2 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RLIMQ9NVW2 AC103988.1-201ENST00000566382 2177 ntBASIC2.88□□□□□ -1.95
RLIMQ9NVW2 AP003122.5-201ENST00000527668 3766 ntBASIC2.88□□□□□ -1.95
RLIMQ9NVW2 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RLIMQ9NVW2 SNORA71.3-201ENST00000362582 128 ntBASIC2.87□□□□□ -1.95
RLIMQ9NVW2 Y_RNA.105-201ENST00000363182 111 ntBASIC2.87□□□□□ -1.95
RLIMQ9NVW2 Y_RNA.179-201ENST00000363844 90 ntBASIC2.87□□□□□ -1.95
RLIMQ9NVW2 Y_RNA.183-201ENST00000363882 113 ntBASIC2.87□□□□□ -1.95
RLIMQ9NVW2 Y_RNA.193-201ENST00000363979 102 ntBASIC2.87□□□□□ -1.95
RLIMQ9NVW2 Y_RNA.276-201ENST00000364732 109 ntBASIC2.87□□□□□ -1.95
RLIMQ9NVW2 SNORA18.2-201ENST00000383865 132 ntBASIC2.87□□□□□ -1.95
RLIMQ9NVW2 Y_RNA.461-201ENST00000384263 103 ntBASIC2.87□□□□□ -1.95
RLIMQ9NVW2 RNU6-611P-201ENST00000384276 104 ntBASIC2.87□□□□□ -1.95
RLIMQ9NVW2 AC244505.4-201ENST00000434905 287 ntBASIC2.87□□□□□ -1.95
RLIMQ9NVW2 SSXP5-201ENST00000443473 287 ntBASIC2.87□□□□□ -1.95
RLIMQ9NVW2 AC092185.1-201ENST00000491371 97 ntBASIC2.87□□□□□ -1.95
RLIMQ9NVW2 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.87□□□□□ -1.95
RLIMQ9NVW2 RN7SKP49-201ENST00000516675 260 ntBASIC2.87□□□□□ -1.95
RLIMQ9NVW2 RNU6-570P-201ENST00000517051 105 ntBASIC2.87□□□□□ -1.95
RLIMQ9NVW2 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.87□□□□□ -1.95
RLIMQ9NVW2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.87□□□□□ -1.95
RLIMQ9NVW2 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.87□□□□□ -1.95
RLIMQ9NVW2 MYL12BP1-201ENST00000569826 507 ntBASIC2.87□□□□□ -1.95
RLIMQ9NVW2 AC023043.3-201ENST00000593113 385 ntBASIC2.87□□□□□ -1.95
RLIMQ9NVW2 MIR376A1-201ENST00000616574 68 ntBASIC2.87□□□□□ -1.95
RLIMQ9NVW2 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.87□□□□□ -1.95
RLIMQ9NVW2 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RLIMQ9NVW2 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms