Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.54□□□□□ -2
LIN7CQ9NUP9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.54□□□□□ -2
LIN7CQ9NUP9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.54□□□□□ -2
LIN7CQ9NUP9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.54□□□□□ -2
LIN7CQ9NUP9 RNU6-137P-201ENST00000363680 108 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 RNU6-26P-201ENST00000383985 107 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 RNY1P14-201ENST00000384426 108 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 RNU6-159P-201ENST00000391080 106 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 MIR1302-11-201ENST00000408051 138 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 MIR1302-9-201ENST00000408365 138 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 MIR1302-10-201ENST00000408734 138 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 AC114482.1-201ENST00000418010 247 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 AC005534.2-201ENST00000431047 433 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.54□□□□□ -2
LIN7CQ9NUP9 AC004386.2-201ENST00000441858 148 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 Z75741.1-201ENST00000446793 314 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 GSTA11P-201ENST00000452866 669 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.54□□□□□ -2
LIN7CQ9NUP9 AC107032.1-201ENST00000485945 480 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 RN7SKP295-201ENST00000517264 153 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 AC007536.1-201ENST00000533382 349 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 AC022616.8-201ENST00000533569 253 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.54□□□□□ -2
LIN7CQ9NUP9 AC090617.3-201ENST00000573670 475 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 MIR5004-201ENST00000579078 107 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 MIR5695-201ENST00000579717 85 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 MIR3171-201ENST00000584270 74 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.54□□□□□ -2
LIN7CQ9NUP9 SNRPGP20-201ENST00000604477 205 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 MIR1302-2-201ENST00000607096 138 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 MIR7112-201ENST00000616126 65 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 AC007485.1-201ENST00000616755 206 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 AC005562.2-201ENST00000618264 111 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LIN7CQ9NUP9 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.54□□□□□ -2
LIN7CQ9NUP9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
LIN7CQ9NUP9 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.54□□□□□ -2
LIN7CQ9NUP9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.54□□□□□ -2
LIN7CQ9NUP9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.54□□□□□ -2
LIN7CQ9NUP9 AC080100.1-201ENST00000624239 5356 ntBASIC2.54□□□□□ -2
LIN7CQ9NUP9 Z82209.1-201ENST00000422141 2135 ntBASIC2.53□□□□□ -2
LIN7CQ9NUP9 AC073346.2-201ENST00000624724 2058 ntBASIC2.53□□□□□ -2
LIN7CQ9NUP9 Y_RNA.216-201ENST00000364205 93 ntBASIC2.53□□□□□ -2
LIN7CQ9NUP9 RNU4-42P-201ENST00000364738 142 ntBASIC2.53□□□□□ -2
LIN7CQ9NUP9 RNU6-1227P-201ENST00000383981 107 ntBASIC2.53□□□□□ -2
LIN7CQ9NUP9 RNU6-1011P-201ENST00000384668 107 ntBASIC2.53□□□□□ -2
LIN7CQ9NUP9 MIR10B-201ENST00000385011 110 ntBASIC2.53□□□□□ -2
LIN7CQ9NUP9 RNU1-139P-201ENST00000391307 165 ntBASIC2.53□□□□□ -2
LIN7CQ9NUP9 MIR320B2-201ENST00000408479 138 ntBASIC2.53□□□□□ -2
LIN7CQ9NUP9 Y_RNA.592-201ENST00000410274 109 ntBASIC2.53□□□□□ -2
LIN7CQ9NUP9 CHEK2P4-201ENST00000450340 246 ntBASIC2.53□□□□□ -2
LIN7CQ9NUP9 MTCO3P8-201ENST00000453691 755 ntBASIC2.53□□□□□ -2
LIN7CQ9NUP9 RN7SL863P-201ENST00000462370 296 ntBASIC2.53□□□□□ -2
LIN7CQ9NUP9 AP004217.1-201ENST00000480579 346 ntBASIC2.53□□□□□ -2
LIN7CQ9NUP9 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.53□□□□□ -2
LIN7CQ9NUP9 RNU6-1114P-201ENST00000516022 107 ntBASIC2.53□□□□□ -2
LIN7CQ9NUP9 RNU2-44P-201ENST00000516795 194 ntBASIC2.53□□□□□ -2
LIN7CQ9NUP9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.53□□□□□ -2
LIN7CQ9NUP9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
LIN7CQ9NUP9 AC026470.2-201ENST00000561492 181 ntBASIC2.53□□□□□ -2
LIN7CQ9NUP9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.53□□□□□ -2
LIN7CQ9NUP9 MIR4658-201ENST00000584344 65 ntBASIC2.53□□□□□ -2
LIN7CQ9NUP9 AL356575.1-201ENST00000603008 283 ntBASIC2.53□□□□□ -2
LIN7CQ9NUP9 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.53□□□□□ -2
LIN7CQ9NUP9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
LIN7CQ9NUP9 AC005296.1-201ENST00000616145 209 ntBASIC2.53□□□□□ -2
LIN7CQ9NUP9 AC138305.3-201ENST00000624988 240 ntBASIC2.53□□□□□ -2
LIN7CQ9NUP9 MIR1248-201ENST00000629190 106 ntBASIC2.53□□□□□ -2
LIN7CQ9NUP9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2.01
LIN7CQ9NUP9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LIN7CQ9NUP9 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LIN7CQ9NUP9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LIN7CQ9NUP9 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LIN7CQ9NUP9 RNU6-873P-201ENST00000363833 107 ntBASIC2.52□□□□□ -2.01
LIN7CQ9NUP9 RNU6-743P-201ENST00000364151 106 ntBASIC2.52□□□□□ -2.01
LIN7CQ9NUP9 RNU1-115P-201ENST00000365329 160 ntBASIC2.52□□□□□ -2.01
LIN7CQ9NUP9 SNORD15B-201ENST00000384714 146 ntBASIC2.52□□□□□ -2.01
LIN7CQ9NUP9 RNA5SP344-201ENST00000411081 104 ntBASIC2.52□□□□□ -2.01
LIN7CQ9NUP9 MCFD2P1-201ENST00000417812 300 ntBASIC2.52□□□□□ -2.01
LIN7CQ9NUP9 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.52□□□□□ -2.01
LIN7CQ9NUP9 MTCYBP6-201ENST00000441810 138 ntBASIC2.52□□□□□ -2.01
LIN7CQ9NUP9 AC018868.1-201ENST00000491307 315 ntBASIC2.52□□□□□ -2.01
LIN7CQ9NUP9 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.52□□□□□ -2.01
LIN7CQ9NUP9 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.52□□□□□ -2.01
LIN7CQ9NUP9 SNORA25.14-201ENST00000516481 132 ntBASIC2.52□□□□□ -2.01
LIN7CQ9NUP9 RNU5F-4P-201ENST00000516581 114 ntBASIC2.52□□□□□ -2.01
LIN7CQ9NUP9 RNU6-1098P-201ENST00000516772 96 ntBASIC2.52□□□□□ -2.01
LIN7CQ9NUP9 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.52□□□□□ -2.01
LIN7CQ9NUP9 ELOCP31-201ENST00000540463 467 ntBASIC2.52□□□□□ -2.01
LIN7CQ9NUP9 MIR5006-201ENST00000583027 110 ntBASIC2.52□□□□□ -2.01
LIN7CQ9NUP9 MIR5195-201ENST00000583555 115 ntBASIC2.52□□□□□ -2.01
LIN7CQ9NUP9 AL356055.1-201ENST00000602528 446 ntBASIC2.52□□□□□ -2.01
LIN7CQ9NUP9 ZNF72P-201ENST00000425869 1908 ntBASIC2.51□□□□□ -2.01
LIN7CQ9NUP9 Y_RNA.80-201ENST00000362996 102 ntBASIC2.51□□□□□ -2.01
LIN7CQ9NUP9 SNORA38-201ENST00000363946 132 ntBASIC2.51□□□□□ -2.01
LIN7CQ9NUP9 RNU6-234P-201ENST00000365229 104 ntBASIC2.51□□□□□ -2.01
LIN7CQ9NUP9 SNORA25B-201ENST00000365507 128 ntBASIC2.51□□□□□ -2.01
LIN7CQ9NUP9 U8.9-201ENST00000365667 134 ntBASIC2.51□□□□□ -2.01
LIN7CQ9NUP9 SNORA7.4-201ENST00000384249 137 ntBASIC2.51□□□□□ -2.01
LIN7CQ9NUP9 Y_RNA.485-201ENST00000384395 102 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms