Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 RNA5SP508-201ENST00000411327 119 ntBASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 AL356379.1-201ENST00000414105 126 ntBASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 WARS2P1-201ENST00000429678 537 ntBASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 AC096638.1-201ENST00000444678 216 ntBASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 MIR449C-201ENST00000516047 92 ntBASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 AC026470.2-201ENST00000561492 181 ntBASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 AC090517.1-201ENST00000569307 266 ntBASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 AL109918.3-201ENST00000603072 338 ntBASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 AL162373.1-201ENST00000620433 407 ntBASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 AC139792.2-201ENST00000624218 587 ntBASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 AC068137.4-201ENST00000638485 296 ntBASIC2.31□□□□□ -2.04
BLOC1S4Q9NUP1 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 SNORA29-201ENST00000384183 140 ntBASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 Y_RNA.453-201ENST00000384223 109 ntBASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 RNU6-784P-201ENST00000384330 106 ntBASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 RNU6-1026P-201ENST00000384465 108 ntBASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 AL135786.1-201ENST00000415892 214 ntBASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 AC123900.1-201ENST00000420390 96 ntBASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 AL139413.1-201ENST00000421309 217 ntBASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 BX510359.4-201ENST00000423750 193 ntBASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 USP9YP28-201ENST00000435142 589 ntBASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 AL353572.1-201ENST00000442490 417 ntBASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 AL021397.1-201ENST00000451806 248 ntBASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 RPL23AP3-201ENST00000453844 468 ntBASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 RNU6-256P-201ENST00000516747 97 ntBASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 AP002770.2-201ENST00000543613 532 ntBASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 AC243960.4-201ENST00000600532 288 ntBASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 AC146944.4-201ENST00000602697 718 ntBASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 AL627230.6-201ENST00000611129 280 ntBASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 RMST_3.1-201ENST00000611651 109 ntBASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 RMST_6.1-201ENST00000611980 203 ntBASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
BLOC1S4Q9NUP1 AC009487.4-201ENST00000624969 3585 ntBASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 RNU5B-2P-201ENST00000363036 113 ntBASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 RNU6-23P-201ENST00000363283 107 ntBASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 Y_RNA.295-201ENST00000364918 102 ntBASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 RNU6-790P-201ENST00000384479 105 ntBASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 U3.40-201ENST00000408706 208 ntBASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 RNU2-41P-201ENST00000410991 178 ntBASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 AC096920.1-201ENST00000423991 241 ntBASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 HMGN2P3-201ENST00000433603 273 ntBASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 HMGN2P5-201ENST00000436882 273 ntBASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 DAP3P1-201ENST00000441522 278 ntBASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 AL035666.1-201ENST00000446195 348 ntBASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 PCMTD1P1-201ENST00000455560 355 ntBASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 RNU1-131P-201ENST00000458943 161 ntBASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 RPS23P5-201ENST00000495419 428 ntBASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 MIR514B-201ENST00000516774 80 ntBASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 AC087441.2-201ENST00000529141 262 ntBASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 MIR4435-1-201ENST00000582552 80 ntBASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 AC025754.2-201ENST00000606491 432 ntBASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 AL138726.1-201ENST00000614873 333 ntBASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 AC090517.2-201ENST00000614966 680 ntBASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 AC009033.1-201ENST00000624279 431 ntBASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
BLOC1S4Q9NUP1 RNU6-562P-201ENST00000362731 107 ntBASIC2.28□□□□□ -2.04
BLOC1S4Q9NUP1 RNU1-76P-201ENST00000362903 159 ntBASIC2.28□□□□□ -2.04
BLOC1S4Q9NUP1 SNORD31B-201ENST00000364977 69 ntBASIC2.28□□□□□ -2.04
BLOC1S4Q9NUP1 RNA5SP126-201ENST00000365092 109 ntBASIC2.28□□□□□ -2.04
BLOC1S4Q9NUP1 SNORA32.2-201ENST00000384049 122 ntBASIC2.28□□□□□ -2.04
BLOC1S4Q9NUP1 RNU6-1013P-201ENST00000384180 107 ntBASIC2.28□□□□□ -2.04
BLOC1S4Q9NUP1 RNA5SP212-201ENST00000391223 107 ntBASIC2.28□□□□□ -2.04
BLOC1S4Q9NUP1 RNA5SP338-201ENST00000410495 85 ntBASIC2.28□□□□□ -2.04
BLOC1S4Q9NUP1 DPH3P2-201ENST00000422618 250 ntBASIC2.28□□□□□ -2.04
BLOC1S4Q9NUP1 AC027124.2-201ENST00000428249 105 ntBASIC2.28□□□□□ -2.04
BLOC1S4Q9NUP1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
BLOC1S4Q9NUP1 MTCO3P18-201ENST00000440206 761 ntBASIC2.28□□□□□ -2.04
BLOC1S4Q9NUP1 RPL23AP6-201ENST00000446637 472 ntBASIC2.28□□□□□ -2.04
BLOC1S4Q9NUP1 AL513124.1-201ENST00000450410 614 ntBASIC2.28□□□□□ -2.04
BLOC1S4Q9NUP1 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.28□□□□□ -2.04
BLOC1S4Q9NUP1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.28□□□□□ -2.04
BLOC1S4Q9NUP1 RNU7-14P-201ENST00000459331 62 ntBASIC2.28□□□□□ -2.04
BLOC1S4Q9NUP1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.28□□□□□ -2.04
BLOC1S4Q9NUP1 AC010486.1-201ENST00000511793 424 ntBASIC2.28□□□□□ -2.04
BLOC1S4Q9NUP1 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.28□□□□□ -2.04
BLOC1S4Q9NUP1 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.28□□□□□ -2.04
BLOC1S4Q9NUP1 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
BLOC1S4Q9NUP1 MIR219B-201ENST00000637023 88 ntBASIC2.28□□□□□ -2.04
BLOC1S4Q9NUP1 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.28□□□□□ -2.04
BLOC1S4Q9NUP1 AP000553.5-201ENST00000641933 54 ntBASIC2.28□□□□□ -2.04
BLOC1S4Q9NUP1 LINC02555-201ENST00000563933 1951 ntBASIC2.27□□□□□ -2.05
BLOC1S4Q9NUP1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
BLOC1S4Q9NUP1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
BLOC1S4Q9NUP1 RNA5SP276-201ENST00000362580 94 ntBASIC2.27□□□□□ -2.05
BLOC1S4Q9NUP1 RNU6-534P-201ENST00000364877 106 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms