Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 SCOCP1-201ENST00000554676 349 ntBASIC2.56□□□□□ -2
SMC4Q9NTJ3 AL138726.1-201ENST00000614873 333 ntBASIC2.56□□□□□ -2
SMC4Q9NTJ3 MTND4P23-201ENST00000447723 1363 ntBASIC2.56□□□□□ -2
SMC4Q9NTJ3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.56□□□□□ -2
SMC4Q9NTJ3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.55□□□□□ -2
SMC4Q9NTJ3 Y_RNA.100-201ENST00000363141 102 ntBASIC2.55□□□□□ -2
SMC4Q9NTJ3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
SMC4Q9NTJ3 AL356776.1-201ENST00000406574 447 ntBASIC2.55□□□□□ -2
SMC4Q9NTJ3 MTCYBP2-201ENST00000407745 171 ntBASIC2.55□□□□□ -2
SMC4Q9NTJ3 AL590135.1-201ENST00000422215 156 ntBASIC2.55□□□□□ -2
SMC4Q9NTJ3 AC019205.3-201ENST00000424573 156 ntBASIC2.55□□□□□ -2
SMC4Q9NTJ3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.55□□□□□ -2
SMC4Q9NTJ3 AC016700.2-201ENST00000446011 156 ntBASIC2.55□□□□□ -2
SMC4Q9NTJ3 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.55□□□□□ -2
SMC4Q9NTJ3 U8.21-201ENST00000459536 136 ntBASIC2.55□□□□□ -2
SMC4Q9NTJ3 AC015911.1-201ENST00000495111 156 ntBASIC2.55□□□□□ -2
SMC4Q9NTJ3 AC018710.1-201ENST00000506509 158 ntBASIC2.55□□□□□ -2
SMC4Q9NTJ3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.55□□□□□ -2
SMC4Q9NTJ3 RNU6-256P-201ENST00000516747 97 ntBASIC2.55□□□□□ -2
SMC4Q9NTJ3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.55□□□□□ -2
SMC4Q9NTJ3 AC007375.1-201ENST00000554513 578 ntBASIC2.55□□□□□ -2
SMC4Q9NTJ3 MIR4524B-201ENST00000581569 115 ntBASIC2.55□□□□□ -2
SMC4Q9NTJ3 AC018638.8-201ENST00000588755 281 ntBASIC2.55□□□□□ -2
SMC4Q9NTJ3 AC060780.3-201ENST00000589464 80 ntBASIC2.55□□□□□ -2
SMC4Q9NTJ3 AP000553.5-201ENST00000641933 54 ntBASIC2.55□□□□□ -2
SMC4Q9NTJ3 CASC19-280ENST00000642102 1351 ntBASIC2.55□□□□□ -2
SMC4Q9NTJ3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SMC4Q9NTJ3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
SMC4Q9NTJ3 Y_RNA.157-201ENST00000363638 102 ntBASIC2.54□□□□□ -2
SMC4Q9NTJ3 SNORD113-7-201ENST00000363762 77 ntBASIC2.54□□□□□ -2
SMC4Q9NTJ3 SNORD32B-201ENST00000364460 84 ntBASIC2.54□□□□□ -2
SMC4Q9NTJ3 RNU6-128P-201ENST00000383976 107 ntBASIC2.54□□□□□ -2
SMC4Q9NTJ3 HMGN2P39-201ENST00000398005 273 ntBASIC2.54□□□□□ -2
SMC4Q9NTJ3 AL079342.1-201ENST00000401460 267 ntBASIC2.54□□□□□ -2
SMC4Q9NTJ3 RNA5SP201-201ENST00000410316 124 ntBASIC2.54□□□□□ -2
SMC4Q9NTJ3 RNA5SP118-201ENST00000410385 109 ntBASIC2.54□□□□□ -2
SMC4Q9NTJ3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
SMC4Q9NTJ3 USP9YP28-201ENST00000435142 589 ntBASIC2.54□□□□□ -2
SMC4Q9NTJ3 AL137159.1-201ENST00000452808 512 ntBASIC2.54□□□□□ -2
SMC4Q9NTJ3 MTND1P11-201ENST00000456661 876 ntBASIC2.54□□□□□ -2
SMC4Q9NTJ3 RNU7-187P-201ENST00000458985 68 ntBASIC2.54□□□□□ -2
SMC4Q9NTJ3 RPS27P21-201ENST00000486977 252 ntBASIC2.54□□□□□ -2
SMC4Q9NTJ3 RNU4-49P-201ENST00000516080 140 ntBASIC2.54□□□□□ -2
SMC4Q9NTJ3 RNU6-567P-201ENST00000516746 107 ntBASIC2.54□□□□□ -2
SMC4Q9NTJ3 SNORA31.16-201ENST00000516773 139 ntBASIC2.54□□□□□ -2
SMC4Q9NTJ3 RNU6-612P-201ENST00000516909 102 ntBASIC2.54□□□□□ -2
SMC4Q9NTJ3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.54□□□□□ -2
SMC4Q9NTJ3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.54□□□□□ -2
SMC4Q9NTJ3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.54□□□□□ -2
SMC4Q9NTJ3 AC021231.3-201ENST00000558497 370 ntBASIC2.54□□□□□ -2
SMC4Q9NTJ3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.54□□□□□ -2
SMC4Q9NTJ3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.54□□□□□ -2
SMC4Q9NTJ3 MIR4448-201ENST00000584360 86 ntBASIC2.54□□□□□ -2
SMC4Q9NTJ3 AC078899.2-201ENST00000595282 212 ntBASIC2.54□□□□□ -2
SMC4Q9NTJ3 AL031274.2-201ENST00000599419 203 ntBASIC2.54□□□□□ -2
SMC4Q9NTJ3 BNIP3P10-201ENST00000605360 577 ntBASIC2.54□□□□□ -2
SMC4Q9NTJ3 AL133216.2-202ENST00000634512 349 ntBASIC2.54□□□□□ -2
SMC4Q9NTJ3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.54□□□□□ -2
SMC4Q9NTJ3 RNU6-227P-201ENST00000362865 103 ntBASIC2.53□□□□□ -2
SMC4Q9NTJ3 Y_RNA.212-201ENST00000364177 102 ntBASIC2.53□□□□□ -2
SMC4Q9NTJ3 RNU6-1317P-201ENST00000364582 104 ntBASIC2.53□□□□□ -2
SMC4Q9NTJ3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SMC4Q9NTJ3 BTF3L4P2-201ENST00000392798 346 ntBASIC2.53□□□□□ -2
SMC4Q9NTJ3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.53□□□□□ -2
SMC4Q9NTJ3 SRIP3-201ENST00000413200 219 ntBASIC2.53□□□□□ -2
SMC4Q9NTJ3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.53□□□□□ -2
SMC4Q9NTJ3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.53□□□□□ -2
SMC4Q9NTJ3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.53□□□□□ -2
SMC4Q9NTJ3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.53□□□□□ -2
SMC4Q9NTJ3 RPS29P27-201ENST00000463711 170 ntBASIC2.53□□□□□ -2
SMC4Q9NTJ3 AC132942.1-201ENST00000486753 483 ntBASIC2.53□□□□□ -2
SMC4Q9NTJ3 AC114801.2-201ENST00000503825 781 ntBASIC2.53□□□□□ -2
SMC4Q9NTJ3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.53□□□□□ -2
SMC4Q9NTJ3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.53□□□□□ -2
SMC4Q9NTJ3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.53□□□□□ -2
SMC4Q9NTJ3 MIR4529-201ENST00000578110 78 ntBASIC2.53□□□□□ -2
SMC4Q9NTJ3 AL158827.2-201ENST00000602494 330 ntBASIC2.53□□□□□ -2
SMC4Q9NTJ3 AC009248.2-201ENST00000619826 254 ntBASIC2.53□□□□□ -2
SMC4Q9NTJ3 SNORA43.4-201ENST00000629559 138 ntBASIC2.53□□□□□ -2
SMC4Q9NTJ3 AL691447.3-201ENST00000635020 330 ntBASIC2.53□□□□□ -2
SMC4Q9NTJ3 AL450472.1-202ENST00000637286 180 ntBASIC2.53□□□□□ -2
SMC4Q9NTJ3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.53□□□□□ -2
SMC4Q9NTJ3 KPNA2P1-201ENST00000458289 1591 ntBASIC2.53□□□□□ -2.01
SMC4Q9NTJ3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SMC4Q9NTJ3 Y_RNA.301-201ENST00000364990 103 ntBASIC2.52□□□□□ -2.01
SMC4Q9NTJ3 RNA5SP138-201ENST00000365098 114 ntBASIC2.52□□□□□ -2.01
SMC4Q9NTJ3 RNU6-95P-201ENST00000384697 107 ntBASIC2.52□□□□□ -2.01
SMC4Q9NTJ3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.52□□□□□ -2.01
SMC4Q9NTJ3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.52□□□□□ -2.01
SMC4Q9NTJ3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.52□□□□□ -2.01
SMC4Q9NTJ3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.52□□□□□ -2.01
SMC4Q9NTJ3 AC145146.1-201ENST00000496370 254 ntBASIC2.52□□□□□ -2.01
SMC4Q9NTJ3 AC025465.4-201ENST00000513422 638 ntBASIC2.52□□□□□ -2.01
SMC4Q9NTJ3 RNU6-864P-201ENST00000516256 108 ntBASIC2.52□□□□□ -2.01
SMC4Q9NTJ3 RNU2-19P-201ENST00000517288 84 ntBASIC2.52□□□□□ -2.01
SMC4Q9NTJ3 AC026371.1-201ENST00000551867 419 ntBASIC2.52□□□□□ -2.01
SMC4Q9NTJ3 MIR3923-201ENST00000579521 83 ntBASIC2.52□□□□□ -2.01
SMC4Q9NTJ3 AC063943.3-201ENST00000615562 356 ntBASIC2.52□□□□□ -2.01
SMC4Q9NTJ3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.52□□□□□ -2.01
SMC4Q9NTJ3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 183.3 ms